RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeast

Gene SSS1, Length 243 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSS1	YDR086C	SRP101	P32916	621 aa		2.7	□□□□□ -1.98
SSS1	YDR086C	MOH1	P38191	138 aa		2.7	□□□□□ -1.98
SSS1	YDR086C	UBA2	P52488	636 aa		2.7	□□□□□ -1.98
SSS1	YDR086C	SRP1	Q02821	542 aa	Known RBP	2.7	□□□□□ -1.98
SSS1	YDR086C	HRQ1	Q05549	1077 aa		2.7	□□□□□ -1.98
SSS1	YDR086C	NOP8	Q08287	484 aa	Predicted RBP	2.7	□□□□□ -1.98
SSS1	YDR086C	NAP1	P25293	417 aa	Known RBP	2.69	□□□□□ -1.98
SSS1	YDR086C	EFT1	P32324	842 aa	Known RBP	2.69	□□□□□ -1.98
SSS1	YDR086C	SCT1	P32784	759 aa		2.69	□□□□□ -1.98
SSS1	YDR086C	YKL151C	P36059	337 aa		2.69	□□□□□ -1.98
SSS1	YDR086C	KTR4	P38131	464 aa		2.69	□□□□□ -1.98
SSS1	YDR086C	NCS6	P53088	359 aa		2.69	□□□□□ -1.98
SSS1	YDR086C	YLR225C	Q05948	407 aa	Known RBP	2.69	□□□□□ -1.98
SSS1	YDR086C	ESC2	Q06340	456 aa		2.69	□□□□□ -1.98
SSS1	YDR086C	NPC2	Q12408	173 aa		2.69	□□□□□ -1.98
SSS1	YDR086C	YKR078W	P36158	585 aa	Known RBP	2.68	□□□□□ -1.98
SSS1	YDR086C	GIC1	P38785	314 aa		2.68	□□□□□ -1.98
SSS1	YDR086C	SAH1	P39954	449 aa	Known RBP	2.68	□□□□□ -1.98
SSS1	YDR086C	YGR053C	P53234	283 aa		2.68	□□□□□ -1.98
SSS1	YDR086C	TAF7	Q05021	590 aa		2.68	□□□□□ -1.98
SSS1	YDR086C	KAR4	P25583	335 aa		2.67	□□□□□ -1.98
SSS1	YDR086C	ABD1	P32783	436 aa	Predicted RBP	2.67	□□□□□ -1.98
SSS1	YDR086C	STU2	P46675	888 aa		2.67	□□□□□ -1.98
SSS1	YDR086C	FAA4	P47912	694 aa	Known RBP	2.67	□□□□□ -1.98
SSS1	YDR086C	GYP7	P48365	746 aa		2.67	□□□□□ -1.98
SSS1	YDR086C	YML122C	Q03207	126 aa		2.67	□□□□□ -1.98
SSS1	YDR086C	OMS1	Q06668	471 aa		2.67	□□□□□ -1.98
SSS1	YDR086C	TRP4	P07285	380 aa	Predicted RBP	2.66	□□□□□ -1.98
SSS1	YDR086C	AGP1	P25376	633 aa		2.66	□□□□□ -1.98
SSS1	YDR086C	SBA1	P28707	216 aa	Known RBP	2.66	□□□□□ -1.98
SSS1	YDR086C	CDC12	P32468	407 aa	Known RBP	2.66	□□□□□ -1.98
SSS1	YDR086C	NPP2	P39997	493 aa		2.66	□□□□□ -1.98
SSS1	YDR086C	TIM44	Q01852	431 aa		2.66	□□□□□ -1.98
SSS1	YDR086C	WHI4	Q07655	649 aa	Known RBP	2.66	□□□□□ -1.98
SSS1	YDR086C	YOL073C	Q08232	322 aa		2.66	□□□□□ -1.98
SSS1	YDR086C	UPC2	Q12151	913 aa		2.66	□□□□□ -1.98
SSS1	YDR086C	CLN2	P20438	545 aa		2.65	□□□□□ -1.99
SSS1	YDR086C	ERG4	P25340	473 aa		2.65	□□□□□ -1.99
SSS1	YDR086C	YBR238C	P38330	731 aa	Known RBP	2.65	□□□□□ -1.99
SSS1	YDR086C	SUL1	P38359	859 aa		2.65	□□□□□ -1.99
SSS1	YDR086C	QRI1	P43123	477 aa	Known RBP	2.65	□□□□□ -1.99
SSS1	YDR086C	RAI1	P53063	387 aa	Known RBP	2.65	□□□□□ -1.99
SSS1	YDR086C	SFB2	P53953	876 aa		2.65	□□□□□ -1.99
SSS1	YDR086C	GDE1	Q02979	1223 aa		2.65	□□□□□ -1.99
SSS1	YDR086C	YLR040C	Q07988	224 aa		2.65	□□□□□ -1.99
SSS1	YDR086C	ACF2	Q12168	779 aa		2.65	□□□□□ -1.99
SSS1	YDR086C	LAS17	Q12446	633 aa		2.65	□□□□□ -1.99
SSS1	YDR086C	CAD1	P24813	409 aa	Known RBP	2.64	□□□□□ -1.99
SSS1	YDR086C	SED4	P25365	1065 aa		2.64	□□□□□ -1.99
SSS1	YDR086C	MBP1	P39678	833 aa		2.64	□□□□□ -1.99
SSS1	YDR086C	YER158C	P40095	573 aa		2.64	□□□□□ -1.99
SSS1	YDR086C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
SSS1	YDR086C	BUL1	P48524	976 aa		2.64	□□□□□ -1.99
SSS1	YDR086C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
SSS1	YDR086C	RNT1	Q02555	471 aa		2.64	□□□□□ -1.99
SSS1	YDR086C	VPS30	Q02948	557 aa		2.64	□□□□□ -1.99
SSS1	YDR086C	MCH5	Q08777	521 aa		2.64	□□□□□ -1.99
SSS1	YDR086C	FAL1	Q12099	399 aa	Known RBP	2.64	□□□□□ -1.99
SSS1	YDR086C	PPR1	P07272	904 aa	Predicted RBP	2.63	□□□□□ -1.99
SSS1	YDR086C	CDC48	P25694	835 aa	Known RBP	2.63	□□□□□ -1.99
SSS1	YDR086C	YKE2	P52553	114 aa		2.63	□□□□□ -1.99
SSS1	YDR086C	SHE9	Q04172	456 aa		2.63	□□□□□ -1.99
SSS1	YDR086C	TMN2	Q04562	672 aa		2.63	□□□□□ -1.99
SSS1	YDR086C	SVF1	Q05515	481 aa		2.63	□□□□□ -1.99
SSS1	YDR086C	DUS3	Q06053	668 aa	Known RBP	2.63	□□□□□ -1.99
SSS1	YDR086C	YPR196W	Q06595	470 aa		2.63	□□□□□ -1.99
SSS1	YDR086C	IRC10	Q08118	586 aa		2.63	□□□□□ -1.99
SSS1	YDR086C	STE14	P32584	239 aa		2.62	□□□□□ -1.99
SSS1	YDR086C	TSL1	P38427	1098 aa	Known RBP	2.62	□□□□□ -1.99
SSS1	YDR086C	ATF1	P40353	525 aa		2.62	□□□□□ -1.99
SSS1	YDR086C	TPO2	P53283	614 aa		2.62	□□□□□ -1.99
SSS1	YDR086C	VPS16	Q03308	798 aa		2.62	□□□□□ -1.99
SSS1	YDR086C	ADE8	P04161	214 aa		2.61	□□□□□ -1.99
SSS1	YDR086C	ALG7	P07286	448 aa		2.61	□□□□□ -1.99
SSS1	YDR086C	FBP1	P09201	348 aa		2.61	□□□□□ -1.99
SSS1	YDR086C	PPH3	P32345	308 aa		2.61	□□□□□ -1.99
SSS1	YDR086C	DAS1	P47005	663 aa		2.61	□□□□□ -1.99
SSS1	YDR086C	STB4	P50104	949 aa		2.61	□□□□□ -1.99
SSS1	YDR086C	CWC24	P53769	259 aa		2.61	□□□□□ -1.99
SSS1	YDR086C	NOT3	P06102	836 aa	Known RBP	2.6	□□□□□ -1.99
SSS1	YDR086C	PRI2	P20457	528 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	STE13	P33894	931 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	MRP8	P35719	219 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	VBA5	P36172	582 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	SIT1	P39980	628 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	SDP1	P40479	209 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	MAD1	P40957	749 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	ERG5	P54781	538 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	YDR306C	Q06640	478 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	HBT1	Q07653	1046 aa	Known RBP	2.6	□□□□□ -1.99
SSS1	YDR086C	PIN2	Q12057	282 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	TRM11	Q12463	433 aa		2.6	□□□□□ -1.99
SSS1	YDR086C	MET3	P08536	511 aa		2.59	□□□□□ -1.99
SSS1	YDR086C	NPP1	P25353	742 aa		2.59	□□□□□ -1.99
SSS1	YDR086C	CUE2	P36075	443 aa	Known RBP	2.59	□□□□□ -1.99
SSS1	YDR086C	YKL069W	P36088	180 aa		2.59	□□□□□ -1.99
SSS1	YDR086C	PBY1	P38254	753 aa		2.59	□□□□□ -1.99
SSS1	YDR086C	CCM1	P48237	864 aa	Predicted RBP	2.59	□□□□□ -1.99
SSS1	YDR086C	SLU7	Q02775	382 aa	Known RBP	2.59	□□□□□ -1.99
SSS1	YDR086C	YMR206W	Q03695	313 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms