RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W MDM38Q08179 573 aa3.17□□□□□ -1.9
CDC36YDL165W AFT2Q08957 416 aa3.17□□□□□ -1.9
CDC36YDL165W SDS3P40505 327 aa3.16□□□□□ -1.9
CDC36YDL165W HRQ1Q05549 1077 aa3.16□□□□□ -1.9
CDC36YDL165W UPC2Q12151 913 aa3.16□□□□□ -1.9
CDC36YDL165W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
CDC36YDL165W YLL058WQ12198 575 aa3.16□□□□□ -1.9
CDC36YDL165W MDM10P18409 493 aa3.15□□□□□ -1.91
CDC36YDL165W RAD27P26793 382 aa3.15□□□□□ -1.91
CDC36YDL165W GIC1P38785 314 aa3.15□□□□□ -1.91
CDC36YDL165W SRT1Q03175 343 aa3.15□□□□□ -1.91
CDC36YDL165W SUT2Q12286 268 aa3.15□□□□□ -1.91
CDC36YDL165W BNR1P40450 1375 aa3.14□□□□□ -1.91
CDC36YDL165W FUN30P31380 1131 aa3.14□□□□□ -1.91
CDC36YDL165W ERG5P54781 538 aa3.14□□□□□ -1.91
CDC36YDL165W SLU7Q02775 382 aaKnown RBP3.14□□□□□ -1.91
CDC36YDL165W YPL066WQ12194 479 aa3.14□□□□□ -1.91
CDC36YDL165W STE14P32584 239 aa3.13□□□□□ -1.91
CDC36YDL165W IMO32P53219 342 aa3.13□□□□□ -1.91
CDC36YDL165W HOF1Q05080 669 aa3.13□□□□□ -1.91
CDC36YDL165W HBT1Q07653 1046 aaKnown RBP3.13□□□□□ -1.91
CDC36YDL165W MRH1Q12117 320 aaPredicted RBP3.13□□□□□ -1.91
CDC36YDL165W ICT1Q12385 394 aa3.13□□□□□ -1.91
CDC36YDL165W MCM2P29469 868 aa3.12□□□□□ -1.91
CDC36YDL165W NPP2P39997 493 aa3.12□□□□□ -1.91
CDC36YDL165W YAP7Q08182 245 aa3.12□□□□□ -1.91
CDC36YDL165W RTT10Q08924 1013 aa3.12□□□□□ -1.91
CDC36YDL165W SED4P25365 1065 aa3.11□□□□□ -1.91
CDC36YDL165W PPZ2P33329 710 aa3.11□□□□□ -1.91
CDC36YDL165W MOT2P34909 587 aaKnown RBP3.11□□□□□ -1.91
CDC36YDL165W PPS1P38148 807 aa3.11□□□□□ -1.91
CDC36YDL165W COQ11Q05892 277 aa3.11□□□□□ -1.91
CDC36YDL165W TRP2P00899 507 aaKnown RBP3.1□□□□□ -1.91
CDC36YDL165W INO1P11986 533 aa3.1□□□□□ -1.91
CDC36YDL165W SEC20P28791 383 aa3.1□□□□□ -1.91
CDC36YDL165W LYP1P32487 611 aa3.1□□□□□ -1.91
CDC36YDL165W TDP1P38319 544 aa3.1□□□□□ -1.91
CDC36YDL165W RIX1P38883 763 aaPredicted RBP3.1□□□□□ -1.91
CDC36YDL165W SFB2P53953 876 aa3.1□□□□□ -1.91
CDC36YDL165W TMA46Q12000 345 aaKnown RBP3.1□□□□□ -1.91
CDC36YDL165W TMT1P32643 299 aa3.09□□□□□ -1.91
CDC36YDL165W YHL017WP38745 532 aa3.09□□□□□ -1.91
CDC36YDL165W IPL1P38991 367 aa3.09□□□□□ -1.91
CDC36YDL165W YGL176CP46945 554 aa3.09□□□□□ -1.91
CDC36YDL165W FRE5Q08908 694 aa3.09□□□□□ -1.91
CDC36YDL165W RKM4Q12504 494 aa3.09□□□□□ -1.91
CDC36YDL165W YNL162W-AQ3E7A8 72 aa3.09□□□□□ -1.91
CDC36YDL165W TUB1P09733 447 aaKnown RBP3.08□□□□□ -1.92
CDC36YDL165W GFA1P14742 717 aaKnown RBP3.08□□□□□ -1.92
CDC36YDL165W FLO10P36170 1169 aa3.08□□□□□ -1.92
CDC36YDL165W SAH1P39954 449 aaKnown RBP3.08□□□□□ -1.92
CDC36YDL165W DAS1P47005 663 aa3.08□□□□□ -1.92
CDC36YDL165W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
CDC36YDL165W RPC82P32349 654 aa3.07□□□□□ -1.92
CDC36YDL165W YKL107WP34251 309 aa3.07□□□□□ -1.92
CDC36YDL165W TAH11P47112 604 aa3.07□□□□□ -1.92
CDC36YDL165W EEB1Q02891 456 aa3.07□□□□□ -1.92
CDC36YDL165W SPR28Q04921 423 aa3.07□□□□□ -1.92
CDC36YDL165W SEC21P32074 935 aaKnown RBP3.06□□□□□ -1.92
CDC36YDL165W TYW3P53177 273 aa3.06□□□□□ -1.92
CDC36YDL165W PEX19Q07418 342 aa3.06□□□□□ -1.92
CDC36YDL165W MET3P08536 511 aa3.05□□□□□ -1.92
CDC36YDL165W DUT1P33317 147 aa3.05□□□□□ -1.92
CDC36YDL165W ELO3P40319 345 aa3.05□□□□□ -1.92
CDC36YDL165W RAI1P53063 387 aaKnown RBP3.05□□□□□ -1.92
CDC36YDL165W VPS73P53142 486 aaKnown RBP3.05□□□□□ -1.92
CDC36YDL165W ADY4Q05955 493 aa3.05□□□□□ -1.92
CDC36YDL165W THI7Q05998 598 aa3.05□□□□□ -1.92
CDC36YDL165W CTF13P35203 478 aa3.04□□□□□ -1.92
CDC36YDL165W FYV10P40492 516 aa3.04□□□□□ -1.92
CDC36YDL165W DLT1Q04216 342 aa3.04□□□□□ -1.92
CDC36YDL165W ESF1Q06344 628 aaKnown RBP3.04□□□□□ -1.92
CDC36YDL165W HCA4P20448 770 aaKnown RBP3.03□□□□□ -1.92
CDC36YDL165W ILV6P25605 309 aaKnown RBP3.03□□□□□ -1.92
CDC36YDL165W CDC12P32468 407 aaKnown RBP3.03□□□□□ -1.92
CDC36YDL165W GLO1P50107 326 aa3.03□□□□□ -1.92
CDC36YDL165W SEC5P89102 971 aa3.03□□□□□ -1.92
CDC36YDL165W YLR225CQ05948 407 aaKnown RBP3.03□□□□□ -1.92
CDC36YDL165W ARO10Q06408 635 aa3.03□□□□□ -1.92
CDC36YDL165W MET6P05694 767 aaKnown RBP3.02□□□□□ -1.93
CDC36YDL165W MGE1P38523 228 aa3.02□□□□□ -1.93
CDC36YDL165W GYP7P48365 746 aa3.02□□□□□ -1.93
CDC36YDL165W SSL1Q04673 461 aaPredicted RBP3.02□□□□□ -1.93
CDC36YDL165W YPR196WQ06595 470 aa3.02□□□□□ -1.93
CDC36YDL165W TRM11Q12463 433 aa3.02□□□□□ -1.93
CDC36YDL165W FBP1P09201 348 aa3.01□□□□□ -1.93
CDC36YDL165W TUB3P09734 445 aaKnown RBP3.01□□□□□ -1.93
CDC36YDL165W CAF20P12962 161 aaKnown RBP3.01□□□□□ -1.93
CDC36YDL165W CDC43P18898 376 aa3.01□□□□□ -1.93
CDC36YDL165W YJR107WP47145 328 aa3.01□□□□□ -1.93
CDC36YDL165W SRP1Q02821 542 aaKnown RBP3.01□□□□□ -1.93
CDC36YDL165W NOT3P06102 836 aaKnown RBP3□□□□□ -1.93
CDC36YDL165W ADY2P25613 283 aa3□□□□□ -1.93
CDC36YDL165W PCL5P38794 229 aa3□□□□□ -1.93
CDC36YDL165W SDP1P40479 209 aa3□□□□□ -1.93
CDC36YDL165W MUP1P50276 574 aa3□□□□□ -1.93
CDC36YDL165W SEN54Q02825 467 aaPredicted RBP3□□□□□ -1.93
CDC36YDL165W CDC34P14682 295 aa2.99□□□□□ -1.93
CDC36YDL165W ATE1P16639 503 aa2.99□□□□□ -1.93
CDC36YDL165W KIN3P22209 435 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 97.2 ms