RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	YJL132W	P47014	750 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	PRP43	P53131	767 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	RPT6	Q01939	405 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	CSR1	Q06705	408 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	CDC25	P04821	1589 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	SMY1	P32364	656 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	COY1	P34237	679 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	YKL075C	P36083	450 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	PAM1	P37304	830 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	NOP4	P37838	685 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	ARL1	P38116	183 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	SIP3	P38717	1229 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	NOC2	P39744	710 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	UBP9	P39967	754 aa		4.07	□□□□□ -1.76
RPO21	YDL140C	ADE16	P54113	591 aa	Known RBP	4.07	□□□□□ -1.76
RPO21	YDL140C	POL1	P13382	1468 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	GAC1	P28006	793 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	MRE11	P32829	692 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	NIC96	P34077	839 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	TEF4	P36008	412 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	YHL026C	P38740	315 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	VID28	P40547	921 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	RGD2	P43556	714 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	DAK1	P54838	584 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	TGL2	P54857	326 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	BNA5	Q05979	453 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	RRP9	Q06506	573 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	SGT1	Q08446	395 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	HOS1	Q12214	470 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	SVS1	Q12254	260 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	AIM44	Q99299	758 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	MDM35	O60200	86 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	PGK1	P00560	416 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	MED6	P38782	295 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	VPS41	P38959	992 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	YGR117C	P53270	476 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	NCS2	P53923	493 aa	Predicted RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	ALG11	P53954	548 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	VPS30	Q02948	557 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	SHE9	Q04172	456 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	HRD3	Q05787	833 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	BSP1	Q06604	576 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	RIT1	P23796	513 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	MEI4	P29467	408 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	SLD2	P34252	453 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	NAS2	P40555	220 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	CUL3	P53202	744 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	ALD6	P54115	500 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	GLE1	Q12315	538 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	GYP5	Q12344	894 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	TUS1	Q06412	1307 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	SNF1	P06782	633 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	RPL35A	P0CX84	120 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	RPL35B	P0CX85	120 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	MAS2	P11914	482 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	ERT1	P38140	529 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	SNF7	P39929	240 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	SBE2	P42223	864 aa	Known RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	TAM41	P53230	385 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	YPL034W	Q03083	165 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	RTK1	Q12100	620 aa	Predicted RBP	4.06	□□□□□ -1.76
RPO21	YDL140C	TMA17	Q12513	150 aa		4.06	□□□□□ -1.76
RPO21	YDL140C	SBP1	P10080	294 aa	Known RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	PTP1	P25044	335 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	BRF1	P29056	596 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	NUF2	P33895	451 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	PXA2	P34230	853 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	GDH3	P39708	457 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	BIM1	P40013	344 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	PRP3	Q03338	469 aa	Predicted RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	ARG7	Q04728	441 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	YSP2	Q06681	1438 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	ATP1	P07251	545 aa	Known RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	OXP1	P28273	1286 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	PPH3	P32345	308 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	SRB4	P32569	687 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	HMT1	P38074	348 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	CHS6	P40955	746 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	HUL4	P40985	892 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	MAF1	P41910	395 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	SAM37	P50110	327 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	VID30	P53076	958 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	YML037C	Q03703	340 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	THI20	Q08224	551 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	SEC39	Q12745	709 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	UTP25	P40498	721 aa	Known RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	SPO22	P40511	975 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	SUM1	P46676	1062 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	HXT17	P53631	564 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	ULP1	Q02724	621 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	YMR178W	Q03219	274 aa	Known RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	GAD1	Q04792	585 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	PUS1	Q12211	544 aa	Known RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	NOP58	Q12499	511 aa	Known RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	CCL1	P37366	393 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	YHR078W	P38799	552 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	HOS2	P53096	452 aa	Predicted RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	SPP1	Q03012	353 aa		4.05	□□□□□ -1.76
RPO21	YDL140C	MAG2	Q06436	670 aa	Known RBP	4.05	□□□□□ -1.76
RPO21	YDL140C	SHS1	Q07657	551 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms