RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	FUN30	P31380	1131 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	NPP2	P39997	493 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	YER158C	P40095	573 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	HFM1	P51979	1187 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	NOP14	Q99207	810 aa	Known RBP	7.67	□□□□□ -1.18
SIR2	YDL042C	CDC48	P25694	835 aa	Known RBP	7.66	□□□□□ -1.18
SIR2	YDL042C	PEX6	P33760	1030 aa		7.65	□□□□□ -1.18
SIR2	YDL042C	YPR196W	Q06595	470 aa		7.65	□□□□□ -1.18
SIR2	YDL042C	RAD53	P22216	821 aa		7.64	□□□□□ -1.19
SIR2	YDL042C	YKR073C	P36153	106 aa		7.64	□□□□□ -1.19
SIR2	YDL042C	YJR142W	P47173	342 aa		7.64	□□□□□ -1.19
SIR2	YDL042C	SFB2	P53953	876 aa		7.64	□□□□□ -1.19
SIR2	YDL042C	MDM12	Q92328	271 aa		7.64	□□□□□ -1.19
SIR2	YDL042C	ABZ1	P37254	787 aa	Predicted RBP	7.63	□□□□□ -1.19
SIR2	YDL042C	LSB3	P43603	459 aa	Known RBP	7.63	□□□□□ -1.19
SIR2	YDL042C	FOL2	P51601	243 aa	Known RBP	7.63	□□□□□ -1.19
SIR2	YDL042C	LPX1	Q12405	387 aa	Known RBP	7.63	□□□□□ -1.19
SIR2	YDL042C	APL1	P27351	700 aa		7.63	□□□□□ -1.19
SIR2	YDL042C	TOS1	P38288	455 aa		7.63	□□□□□ -1.19
SIR2	YDL042C	YKE2	P52553	114 aa		7.63	□□□□□ -1.19
SIR2	YDL042C	RSM24	Q03976	319 aa		7.63	□□□□□ -1.19
SIR2	YDL042C	XYL2	Q07993	356 aa		7.63	□□□□□ -1.19
SIR2	YDL042C	KIN2	P13186	1147 aa	Known RBP	7.62	□□□□□ -1.19
SIR2	YDL042C	YAP1801	P38856	637 aa		7.62	□□□□□ -1.19
SIR2	YDL042C	DNM1	P54861	757 aa		7.62	□□□□□ -1.19
SIR2	YDL042C	MON2	P48563	1636 aa	Predicted RBP	7.61	□□□□□ -1.19
SIR2	YDL042C	SFP1	P32432	683 aa		7.61	□□□□□ -1.19
SIR2	YDL042C	SPC29	P33419	253 aa		7.61	□□□□□ -1.19
SIR2	YDL042C	YBR238C	P38330	731 aa	Known RBP	7.61	□□□□□ -1.19
SIR2	YDL042C	DSS1	P39112	969 aa		7.61	□□□□□ -1.19
SIR2	YDL042C	GYP8	P43570	497 aa		7.61	□□□□□ -1.19
SIR2	YDL042C	NIT3	P49954	291 aa		7.61	□□□□□ -1.19
SIR2	YDL042C	ENV7	Q12003	364 aa		7.61	□□□□□ -1.19
SIR2	YDL042C	GSY1	P23337	708 aa		7.6	□□□□□ -1.19
SIR2	YDL042C	RPC82	P32349	654 aa		7.6	□□□□□ -1.19
SIR2	YDL042C	ECM21	P38167	1117 aa	Known RBP	7.6	□□□□□ -1.19
SIR2	YDL042C	ENV11	P53246	860 aa		7.6	□□□□□ -1.19
SIR2	YDL042C	DAM1	P53267	343 aa		7.6	□□□□□ -1.19
SIR2	YDL042C	YGR283C	P53336	341 aa	Predicted RBP	7.6	□□□□□ -1.19
SIR2	YDL042C	ORC3	P54790	616 aa		7.6	□□□□□ -1.19
SIR2	YDL042C	RPL8A	P17076	256 aa	Known RBP	7.6	□□□□□ -1.19
SIR2	YDL042C	SRM1	P21827	482 aa		7.6	□□□□□ -1.19
SIR2	YDL042C	MEF1	P25039	761 aa		7.6	□□□□□ -1.19
SIR2	YDL042C	TFB2	Q02939	513 aa		7.6	□□□□□ -1.19
SIR2	YDL042C	RIB2	Q12362	591 aa	Known RBP	7.6	□□□□□ -1.19
SIR2	YDL042C	VBA3	P25594	458 aa		7.58	□□□□□ -1.2
SIR2	YDL042C	HSP78	P33416	811 aa		7.58	□□□□□ -1.2
SIR2	YDL042C	EMC3	P36039	253 aa		7.58	□□□□□ -1.2
SIR2	YDL042C	ALO1	P54783	526 aa	Known RBP	7.58	□□□□□ -1.2
SIR2	YDL042C	MSC2	Q03455	724 aa		7.58	□□□□□ -1.2
SIR2	YDL042C	ADR1	P07248	1323 aa		7.58	□□□□□ -1.2
SIR2	YDL042C	MPH2	P0CD99	609 aa		7.57	□□□□□ -1.2
SIR2	YDL042C	RFA1	P22336	621 aa	Known RBP	7.57	□□□□□ -1.2
SIR2	YDL042C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	7.57	□□□□□ -1.2	not detected
SIR2	YDL042C	SIZ1	Q04195	904 aa		7.57	□□□□□ -1.2
SIR2	YDL042C	BRE4	Q07660	1125 aa		7.57	□□□□□ -1.2
SIR2	YDL042C	ATP25	Q03153	612 aa		7.56	□□□□□ -1.2
SIR2	YDL042C	CDC9	P04819	755 aa		7.55	□□□□□ -1.2
SIR2	YDL042C	YDR514C	Q04408	483 aa		7.55	□□□□□ -1.2
SIR2	YDL042C	MET7	Q08645	548 aa		7.55	□□□□□ -1.2
SIR2	YDL042C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	7.55	□□□□□ -1.2	not detected
SIR2	YDL042C	NOT3	P06102	836 aa	Known RBP	7.54	□□□□□ -1.2
SIR2	YDL042C	LIP5	P32875	414 aa		7.54	□□□□□ -1.2
SIR2	YDL042C	CRP1	P38845	465 aa	Known RBP	7.54	□□□□□ -1.2
SIR2	YDL042C	YGL081W	P53156	320 aa		7.54	□□□□□ -1.2
SIR2	YDL042C	RSC3	Q06639	885 aa		7.54	□□□□□ -1.2
SIR2	YDL042C	CYC1	P00044	109 aa	Predicted RBP	7.54	□□□□□ -1.2
SIR2	YDL042C	CMP2	P14747	604 aa		7.54	□□□□□ -1.2
SIR2	YDL042C	TSR4	P25040	408 aa		7.54	□□□□□ -1.2
SIR2	YDL042C	SRP101	P32916	621 aa		7.54	□□□□□ -1.2
SIR2	YDL042C	CTH1	P47976	325 aa		7.54	□□□□□ -1.2
SIR2	YDL042C	YNL193W	P53870	558 aa		7.54	□□□□□ -1.2
SIR2	YDL042C	MTC2	P34246	357 aa		7.53	□□□□□ -1.2
SIR2	YDL042C	OMA1	P36163	345 aa		7.53	□□□□□ -1.2
SIR2	YDL042C	ETP1	P38748	585 aa	Known RBP	7.53	□□□□□ -1.2
SIR2	YDL042C	TY4A-J	P47023	414 aa		7.53	□□□□□ -1.2
SIR2	YDL042C	YGR012W	P53206	393 aa		7.53	□□□□□ -1.2
SIR2	YDL042C	INO80	P53115	1489 aa		7.53	□□□□□ -1.2
SIR2	YDL042C	SRD1	P09007	221 aa		7.52	□□□□□ -1.21
SIR2	YDL042C	ENA1	P13587	1091 aa		7.52	□□□□□ -1.21
SIR2	YDL042C	ZRG8	P40021	1076 aa		7.52	□□□□□ -1.21
SIR2	YDL042C	CEP3	P40969	608 aa		7.52	□□□□□ -1.21
SIR2	YDL042C	HLJ1	P48353	224 aa		7.52	□□□□□ -1.21
SIR2	YDL042C	ZDS1	P50111	915 aa	Known RBP	7.52	□□□□□ -1.21
SIR2	YDL042C	RAI1	P53063	387 aa	Known RBP	7.52	□□□□□ -1.21
SIR2	YDL042C	YNR029C	P53729	429 aa	Known RBP	7.52	□□□□□ -1.21
SIR2	YDL042C	ENA2	Q01896	1091 aa		7.52	□□□□□ -1.21
SIR2	YDL042C	REH1	Q06709	432 aa		7.52	□□□□□ -1.21
SIR2	YDL042C	ENA5	Q12691	1091 aa		7.52	□□□□□ -1.21
SIR2	YDL042C	HSF1	P10961	833 aa		7.51	□□□□□ -1.21
SIR2	YDL042C	NOG2	P53742	486 aa	Known RBP	7.51	□□□□□ -1.21
SIR2	YDL042C	VPS30	Q02948	557 aa		7.51	□□□□□ -1.21
SIR2	YDL042C	DAL7	P21826	554 aa		7.51	□□□□□ -1.21
SIR2	YDL042C	PER1	P25625	357 aa		7.51	□□□□□ -1.21
SIR2	YDL042C	URA1	P28272	314 aa	Predicted RBP	7.51	□□□□□ -1.21
SIR2	YDL042C	STE13	P33894	931 aa		7.51	□□□□□ -1.21
SIR2	YDL042C	STO1	P34160	861 aa	Known RBP	7.51	□□□□□ -1.21
SIR2	YDL042C	TAD1	P53065	400 aa		7.51	□□□□□ -1.21
SIR2	YDL042C	GAL10	P04397	699 aa		7.5	□□□□□ -1.21
SIR2	YDL042C	CAF16	P43569	289 aa		7.5	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms