RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PUS6P53294 404 aa6.21□□□□□ -1.42
PDB1YBR221C MEP3P53390 489 aa6.21□□□□□ -1.42
PDB1YBR221C RAD33Q04231 177 aa6.21□□□□□ -1.42
PDB1YBR221C YLR287CQ05881 355 aa6.21□□□□□ -1.42
PDB1YBR221C SWA2Q06677 668 aa6.21□□□□□ -1.42
PDB1YBR221C ESC8Q08119 714 aa6.21□□□□□ -1.42
PDB1YBR221C RTT10Q08924 1013 aa6.21□□□□□ -1.42
PDB1YBR221C SMC6Q12749 1114 aa6.21□□□□□ -1.42
PDB1YBR221C SNF2P22082 1703 aa6.2□□□□□ -1.42
PDB1YBR221C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
PDB1YBR221C RPB10P22139 70 aa6.2□□□□□ -1.42
PDB1YBR221C RER1P25560 188 aa6.2□□□□□ -1.42
PDB1YBR221C KIP2P28743 706 aa6.2□□□□□ -1.42
PDB1YBR221C RAD16P31244 790 aa6.2□□□□□ -1.42
PDB1YBR221C DPH2P32461 534 aa6.2□□□□□ -1.42
PDB1YBR221C SCT1P32784 759 aa6.2□□□□□ -1.42
PDB1YBR221C VPS41P38959 992 aa6.2□□□□□ -1.42
PDB1YBR221C GDH3P39708 457 aa6.2□□□□□ -1.42
PDB1YBR221C SHE10P53075 577 aa6.2□□□□□ -1.42
PDB1YBR221C DUS1P53759 423 aaKnown RBP6.2□□□□□ -1.42
PDB1YBR221C YNL115CP53925 644 aa6.2□□□□□ -1.42
PDB1YBR221C GIC2Q06648 383 aa6.2□□□□□ -1.42
PDB1YBR221C ADY3Q07732 790 aa6.2□□□□□ -1.42
PDB1YBR221C YLR001CQ07895 862 aa6.2□□□□□ -1.42
PDB1YBR221C AVO1Q08236 1176 aa6.2□□□□□ -1.42
PDB1YBR221C YOR238WQ08634 303 aa6.2□□□□□ -1.42
PDB1YBR221C HSH49Q99181 213 aaPredicted RBP6.2□□□□□ -1.42
PDB1YBR221C PHO81P17442 1178 aa6.19□□□□□ -1.42
PDB1YBR221C SOL3P38858 249 aa6.19□□□□□ -1.42
PDB1YBR221C AIM9P40053 627 aaKnown RBP6.19□□□□□ -1.42
PDB1YBR221C RET2P43621 546 aa6.19□□□□□ -1.42
PDB1YBR221C APL6P46682 809 aa6.19□□□□□ -1.42
PDB1YBR221C UTP8P53276 713 aaKnown RBP6.19□□□□□ -1.42
PDB1YBR221C BNI4P53858 892 aa6.19□□□□□ -1.42
PDB1YBR221C NCS2P53923 493 aaPredicted RBP6.19□□□□□ -1.42
PDB1YBR221C ZDS2P54786 942 aa6.19□□□□□ -1.42
PDB1YBR221C TRS130Q03660 1102 aa6.19□□□□□ -1.42
PDB1YBR221C SHE9Q04172 456 aa6.19□□□□□ -1.42
PDB1YBR221C DAL4Q04895 635 aa6.19□□□□□ -1.42
PDB1YBR221C LCB5Q06147 687 aaKnown RBP6.19□□□□□ -1.42
PDB1YBR221C RIX7Q07844 837 aaKnown RBP6.19□□□□□ -1.42
PDB1YBR221C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
PDB1YBR221C TFB4Q12004 338 aa6.19□□□□□ -1.42
PDB1YBR221C RRG1Q12167 365 aaPredicted RBP6.19□□□□□ -1.42
PDB1YBR221C SBP1P10080 294 aaKnown RBP6.18□□□□□ -1.42
PDB1YBR221C VMA2P16140 517 aaKnown RBP6.18□□□□□ -1.42
PDB1YBR221C TEC1P18412 486 aa6.18□□□□□ -1.42
PDB1YBR221C AGP1P25376 633 aa6.18□□□□□ -1.42
PDB1YBR221C ISC10P32645 267 aa6.18□□□□□ -1.42
PDB1YBR221C BEM3P32873 1128 aa6.18□□□□□ -1.42
PDB1YBR221C PIM1P36775 1133 aa6.18□□□□□ -1.42
PDB1YBR221C UBS1P38290 277 aa6.18□□□□□ -1.42
PDB1YBR221C YBR197CP38306 217 aa6.18□□□□□ -1.42
PDB1YBR221C DUG1P43616 481 aaKnown RBP6.18□□□□□ -1.42
PDB1YBR221C MAL11P53048 616 aa6.18□□□□□ -1.42
PDB1YBR221C NPY1P53164 384 aa6.18□□□□□ -1.42
PDB1YBR221C GTR1Q00582 310 aa6.18□□□□□ -1.42
PDB1YBR221C TIM50Q02776 476 aa6.18□□□□□ -1.42
PDB1YBR221C YDL124WQ07551 312 aaKnown RBP6.18□□□□□ -1.42
PDB1YBR221C GYP1Q08484 637 aa6.18□□□□□ -1.42
PDB1YBR221C TMA46Q12000 345 aaKnown RBP6.18□□□□□ -1.42
PDB1YBR221C CMR1Q12510 522 aaKnown RBP6.18□□□□□ -1.42
PDB1YBR221C RPS9BP05755 195 aaKnown RBP6.17□□□□□ -1.42
PDB1YBR221C RPC40P07703 335 aaKnown RBP6.17□□□□□ -1.42
PDB1YBR221C OSM1P21375 501 aaKnown RBP6.17□□□□□ -1.42
PDB1YBR221C AEP2P22136 580 aa6.17□□□□□ -1.42
PDB1YBR221C TRX1P22217 103 aaKnown RBP6.17□□□□□ -1.42
PDB1YBR221C PET309P32522 965 aaPredicted RBP6.17□□□□□ -1.42
PDB1YBR221C DHR2P36009 735 aaPredicted RBP6.17□□□□□ -1.42
PDB1YBR221C BET3P36149 193 aa6.17□□□□□ -1.42
PDB1YBR221C MGS1P40151 587 aa6.17□□□□□ -1.42
PDB1YBR221C PFD1P46988 109 aa6.17□□□□□ -1.42
PDB1YBR221C RBG2P53295 368 aaKnown RBP6.17□□□□□ -1.42
PDB1YBR221C CAF120P53836 1060 aa6.17□□□□□ -1.42
PDB1YBR221C MTQ2Q03920 221 aaPredicted RBP6.17□□□□□ -1.42
PDB1YBR221C SMF3Q12078 473 aaPredicted RBP6.17□□□□□ -1.42
PDB1YBR221C DPH6Q12429 685 aa6.17□□□□□ -1.42
PDB1YBR221C REC107P21651 314 aa6.16□□□□□ -1.42
PDB1YBR221C POL4P25615 582 aa6.16□□□□□ -1.42
PDB1YBR221C CDC48P25694 835 aaKnown RBP6.16□□□□□ -1.42
PDB1YBR221C DAL80P26343 269 aa6.16□□□□□ -1.42
PDB1YBR221C CNS1P33313 385 aa6.16□□□□□ -1.42
PDB1YBR221C PBY1P38254 753 aa6.16□□□□□ -1.42
PDB1YBR221C ETP1P38748 585 aaKnown RBP6.16□□□□□ -1.42
PDB1YBR221C MEF2P39677 819 aa6.16□□□□□ -1.42
PDB1YBR221C TIF4631P39935 952 aaKnown RBP6.16□□□□□ -1.42
PDB1YBR221C RTT105P40063 208 aa6.16□□□□□ -1.42
PDB1YBR221C PCL7P40186 285 aa6.16□□□□□ -1.42
PDB1YBR221C ISM1P48526 1002 aa6.16□□□□□ -1.42
PDB1YBR221C YGR130CP53278 816 aa6.16□□□□□ -1.42
PDB1YBR221C MRPL19P53875 158 aa6.16□□□□□ -1.42
PDB1YBR221C TBF1Q02457 562 aa6.16□□□□□ -1.42
PDB1YBR221C EEB1Q02891 456 aa6.16□□□□□ -1.42
PDB1YBR221C BSC2Q05611 235 aa6.16□□□□□ -1.42
PDB1YBR221C YDL073WQ07454 984 aa6.16□□□□□ -1.42
PDB1YBR221C MDM12Q92328 271 aa6.16□□□□□ -1.42
PDB1YBR221C APC1P53886 1748 aa6.16□□□□□ -1.42
PDB1YBR221C PET111P08468 800 aa6.15□□□□□ -1.42
PDB1YBR221C HNM1P19807 563 aa6.15□□□□□ -1.42
PDB1YBR221C RET1P22276 1149 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms