RNA–Protein interactions for RNA: YBR087W

RFC5, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeast

Gene RFC5, Length 1,065 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFC5	YBR087W	CYC1	P00044	109 aa	Predicted RBP	4.84	□□□□□ -1.63
RFC5	YBR087W	CMP2	P14747	604 aa		4.84	□□□□□ -1.63
RFC5	YBR087W	FUN30	P31380	1131 aa		4.84	□□□□□ -1.63
RFC5	YBR087W	BUD6	P41697	788 aa		4.84	□□□□□ -1.63
RFC5	YBR087W	LCD1	Q04377	747 aa		4.84	□□□□□ -1.63
RFC5	YBR087W	YPR196W	Q06595	470 aa		4.84	□□□□□ -1.63
RFC5	YBR087W	YOR352W	Q08816	343 aa		4.84	□□□□□ -1.63
RFC5	YBR087W	RIB2	Q12362	591 aa	Known RBP	4.84	□□□□□ -1.63
RFC5	YBR087W	SOD2	P00447	233 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	TOM70	P07213	617 aa	Known RBP	4.83	□□□□□ -1.64
RFC5	YBR087W	CIT2	P08679	460 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	MSD1	P15179	658 aa	Known RBP	4.83	□□□□□ -1.64
RFC5	YBR087W	NPP1	P25353	742 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	TIM23	P32897	222 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	TOD6	P34219	525 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	ERT1	P38140	529 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	NPP2	P39997	493 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	GYP7	P48365	746 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	RTA1	P53047	317 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	XYL2	Q07993	356 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	PPM2	Q08282	695 aa		4.83	□□□□□ -1.64
RFC5	YBR087W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RFC5	YBR087W	TOP3	P13099	656 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	AFR1	P33304	620 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	DOM34	P33309	386 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	PET10	P36139	283 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	BET3	P36149	193 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	YKR078W	P36158	585 aa	Known RBP	4.82	□□□□□ -1.64
RFC5	YBR087W	TSL1	P38427	1098 aa	Known RBP	4.82	□□□□□ -1.64
RFC5	YBR087W	YAP1801	P38856	637 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	YER158C	P40095	573 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	TOK1	P40310	691 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	NUP82	P40368	713 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	SNO2	P53823	222 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	SFB2	P53953	876 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	MSC2	Q03455	724 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	YPL277C	Q08989	487 aa		4.82	□□□□□ -1.64
RFC5	YBR087W	GAL10	P04397	699 aa		4.81	□□□□□ -1.64
RFC5	YBR087W	RPS13	P05756	151 aa	Known RBP	4.81	□□□□□ -1.64
RFC5	YBR087W	ERR1	P0CX10	437 aa		4.81	□□□□□ -1.64
RFC5	YBR087W	ERR2	P0CX11	437 aa		4.81	□□□□□ -1.64
RFC5	YBR087W	CDC48	P25694	835 aa	Known RBP	4.81	□□□□□ -1.64
RFC5	YBR087W	CCM1	P48237	864 aa	Predicted RBP	4.81	□□□□□ -1.64
RFC5	YBR087W	SIZ1	Q04195	904 aa		4.81	□□□□□ -1.64
RFC5	YBR087W	ENA1	P13587	1091 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	SRM1	P21827	482 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	PPG1	P32838	368 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	REC104	P33323	182 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	ECM21	P38167	1117 aa	Known RBP	4.8	□□□□□ -1.64
RFC5	YBR087W	UBP6	P43593	499 aa	Known RBP	4.8	□□□□□ -1.64
RFC5	YBR087W	RNH70	P53331	553 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	ENA2	Q01896	1091 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	ROT1	Q03691	256 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	BUL2	Q03758	920 aa	Known RBP	4.8	□□□□□ -1.64
RFC5	YBR087W	SGD1	Q06132	899 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	ENA5	Q12691	1091 aa		4.8	□□□□□ -1.64
RFC5	YBR087W	PHO8	P11491	566 aa		4.79	□□□□□ -1.64
RFC5	YBR087W	RPC82	P32349	654 aa		4.79	□□□□□ -1.64
RFC5	YBR087W	ZRG8	P40021	1076 aa		4.79	□□□□□ -1.64
RFC5	YBR087W	YLR125W	Q12138	136 aa		4.79	□□□□□ -1.64
RFC5	YBR087W	AIM44	Q99299	758 aa		4.79	□□□□□ -1.64
RFC5	YBR087W	SRP101	P32916	621 aa		4.78	□□□□□ -1.64
RFC5	YBR087W	LAM1	P38851	1228 aa		4.78	□□□□□ -1.64
RFC5	YBR087W	PLB2	Q03674	706 aa		4.78	□□□□□ -1.64
RFC5	YBR087W	THI4	P32318	326 aa		4.77	□□□□□ -1.65
RFC5	YBR087W	YBR238C	P38330	731 aa	Known RBP	4.77	□□□□□ -1.65
RFC5	YBR087W	YKE2	P52553	114 aa		4.77	□□□□□ -1.65
RFC5	YBR087W	YGR012W	P53206	393 aa		4.77	□□□□□ -1.65
RFC5	YBR087W	GTF1	P53260	183 aa	Predicted RBP	4.77	□□□□□ -1.65
RFC5	YBR087W	CLU1	Q03690	1277 aa	Known RBP	4.77	□□□□□ -1.65
RFC5	YBR087W	MET6	P05694	767 aa	Known RBP	4.76	□□□□□ -1.65
RFC5	YBR087W	NOT3	P06102	836 aa	Known RBP	4.76	□□□□□ -1.65
RFC5	YBR087W	HSF1	P10961	833 aa		4.76	□□□□□ -1.65
RFC5	YBR087W	RFA1	P22336	621 aa	Known RBP	4.76	□□□□□ -1.65
RFC5	YBR087W	NMD2	P38798	1089 aa	Known RBP	4.76	□□□□□ -1.65
RFC5	YBR087W	MND2	P40577	368 aa		4.76	□□□□□ -1.65
RFC5	YBR087W	ALG2	P43636	503 aa		4.76	□□□□□ -1.65
RFC5	YBR087W	HSV2	P50079	448 aa	Predicted RBP	4.76	□□□□□ -1.65
RFC5	YBR087W	PBP1	P53297	722 aa	Known RBP	4.76	□□□□□ -1.65
RFC5	YBR087W	CDA1	Q06702	301 aa		4.76	□□□□□ -1.65
RFC5	YBR087W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
RFC5	YBR087W	MEF2	P39677	819 aa		4.75	□□□□□ -1.65
RFC5	YBR087W	GDH3	P39708	457 aa		4.75	□□□□□ -1.65
RFC5	YBR087W	NIT3	P49954	291 aa		4.75	□□□□□ -1.65
RFC5	YBR087W	PSP2	P50109	593 aa	Known RBP	4.75	□□□□□ -1.65
RFC5	YBR087W	RAI1	P53063	387 aa	Known RBP	4.75	□□□□□ -1.65
RFC5	YBR087W	ALG12	P53730	551 aa		4.75	□□□□□ -1.65
RFC5	YBR087W	GSF2	Q04697	403 aa	Known RBP	4.75	□□□□□ -1.65
RFC5	YBR087W	YLR358C	O13565	187 aa		4.74	□□□□□ -1.65
RFC5	YBR087W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
RFC5	YBR087W	RRP14	P36080	434 aa	Known RBP	4.74	□□□□□ -1.65
RFC5	YBR087W	POA1	P38218	177 aa		4.74	□□□□□ -1.65
RFC5	YBR087W	GCV2	P49095	1034 aa		4.74	□□□□□ -1.65
RFC5	YBR087W	VPS30	Q02948	557 aa		4.74	□□□□□ -1.65
RFC5	YBR087W	GCN5	Q03330	439 aa		4.74	□□□□□ -1.65
RFC5	YBR087W	YDR132C	Q03900	495 aa		4.74	□□□□□ -1.65
RFC5	YBR087W	ENV7	Q12003	364 aa		4.74	□□□□□ -1.65
RFC5	YBR087W	MPH2	P0CD99	609 aa		4.73	□□□□□ -1.65
RFC5	YBR087W	RAD53	P22216	821 aa		4.73	□□□□□ -1.65
RFC5	YBR087W	CTS1	P29029	562 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 301.2 ms