RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Arfgef2A2A5R2 1792 aa13.56□□□□□ -0.24
Lig1-211ENSMUST00000177588 Ccdc178Q8CDV0 866 aa13.56□□□□□ -0.24
Lig1-211ENSMUST00000177588 Sytl4Q9R0Q1 673 aa13.56□□□□□ -0.24
Lig1-211ENSMUST00000177588 Ier5O89113 308 aa13.55□□□□□ -0.24
Lig1-211ENSMUST00000177588 Pcmtd1P59913 357 aa13.55□□□□□ -0.24
Lig1-211ENSMUST00000177588 Nfat5Q9WV30 1534 aa13.55□□□□□ -0.24
Lig1-211ENSMUST00000177588 EzrP26040 586 aaKnown RBP13.55□□□□□ -0.24
Lig1-211ENSMUST00000177588 Cyp2d12Q8BVD2 504 aa13.55□□□□□ -0.24
Lig1-211ENSMUST00000177588 TnrQ8BYI9 1358 aa13.55□□□□□ -0.24
Lig1-211ENSMUST00000177588 Chpf2Q3UU43 768 aa13.55□□□□□ -0.24
Lig1-211ENSMUST00000177588 Gm10471E9Q1C7 252 aa13.54□□□□□ -0.24
Lig1-211ENSMUST00000177588 Add2Q9QYB8 725 aa13.54□□□□□ -0.24
Lig1-211ENSMUST00000177588 Cavin1O54724 392 aa13.54□□□□□ -0.24
Lig1-211ENSMUST00000177588 Cyp2d11P24457 504 aa13.54□□□□□ -0.24
Lig1-211ENSMUST00000177588 Syt1P46096 421 aa13.54□□□□□ -0.24
Lig1-211ENSMUST00000177588 Smc3Q9CW03 1217 aaKnown RBP13.54□□□□□ -0.24
Lig1-211ENSMUST00000177588 Irx6Q9ER75 438 aa13.54□□□□□ -0.24
Lig1-211ENSMUST00000177588 Ahnak2E9PYB0 1738 aaKnown RBP13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 Cfap73J3QPZ5 306 aa13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 EappQ5BU09 281 aa13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 Stk3Q9JI10 497 aa13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 MsnP26041 577 aaKnown RBP13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 Cct4P80315 539 aaKnown RBP13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 Ccdc94Q9D6J3 314 aa13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 Utp3Q9JI13 469 aaKnown RBP13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 BcorQ8CGN4 1759 aa13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 IbspQ61711 324 aa13.53□□□□□ -0.24
Lig1-211ENSMUST00000177588 Gm45140A0A0N4SUM8 220 aa13.52□□□□□ -0.24
Lig1-211ENSMUST00000177588 Mcm3P25206 812 aaKnown RBP13.52□□□□□ -0.24
Lig1-211ENSMUST00000177588 Kdm6aO70546 1401 aa13.52□□□□□ -0.25
Lig1-211ENSMUST00000177588 Siglec1Q62230 1695 aa13.52□□□□□ -0.25
Lig1-211ENSMUST00000177588 Nphp3Q7TNH6 1325 aa13.52□□□□□ -0.25
Lig1-211ENSMUST00000177588 Wdr24Q8CFJ9 790 aa13.52□□□□□ -0.25
Lig1-211ENSMUST00000177588 Wnk3Q80XP9 1757 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Zfp91Q62511 572 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 OptnQ8K3K8 584 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 TkfcQ8VC30 578 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Amotl1Q9D4H4 968 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Mmel1Q9JLI3 765 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Dlg5E9Q9R9 1921 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Tti2Q8BGV4 512 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Cd22P35329 862 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Tlr7P58681 1050 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Ccdc162pQ0VG85 912 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Acsbg1Q99PU5 721 aa13.51□□□□□ -0.25
Lig1-211ENSMUST00000177588 Gli3Q61602 1583 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Klhl34A2AI76 644 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Tnnt1O88346 262 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Card10P58660 1021 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 CoilQ5SU73 570 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Kcnf1Q7TSH7 493 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Brf1Q8CFK2 676 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Rbm42Q91V81 474 aaKnown RBP13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Cnksr1A2A9K7 700 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Zranb3Q6NZP1 1069 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Oxsr1Q6P9R2 527 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 Top1mtQ8R4U6 593 aa13.5□□□□□ -0.25
Lig1-211ENSMUST00000177588 CrklP47941 303 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Slc4a10Q5DTL9 1118 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Ppp1r37Q8BKR5 712 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Chrna2Q91X60 512 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Add3Q9QYB5 706 aaKnown RBP13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Ppfia1B2RXQ2 1266 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 1700006A11RikB9EHI3 544 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Nucb2P81117 420 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Babam1Q3UI43 333 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Irx4Q9QY61 515 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Zbtb22Q9Z0G7 638 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 Spata31d1bE9QA57 1361 aa13.49□□□□□ -0.25
Lig1-211ENSMUST00000177588 F2rP30558 430 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 EspnlQ3UYR4 1005 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Snx13Q6PHS6 957 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Nup88Q8CEC0 753 aaKnown RBP13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Cchcr1Q8K2I2 770 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Sf3a1Q8K4Z5 791 aaKnown RBP13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Serpina10Q8R121 448 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Dhx30Q99PU8 1217 aaKnown RBP13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Usp48Q3V0C5 1052 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Ifit2Q64112 472 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Atg3Q9CPX6 314 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Txnrd1Q9JMH6 613 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Igbp1bQ9QZ29 343 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Kcnb2A6H8H5 907 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Usp25P57080 1055 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 PdcQ9QW08 244 aa13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Mad1l1Q9WTX8 717 aaKnown RBP13.48□□□□□ -0.25
Lig1-211ENSMUST00000177588 Brpf3B2KF05 1204 aaKnown RBP13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Zap70P43404 618 aa13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Bach1P97302 739 aa13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Kank4Q6P9J5 1016 aa13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Q9D9S1 216 aa13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Nid2O88322 1403 aa13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 HdgfP51859 237 aaKnown RBP13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Bend3Q6PAL0 825 aa13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Cdca7lQ922M5 438 aa13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Tceal9Q9DD24 104 aa13.47□□□□□ -0.25
Lig1-211ENSMUST00000177588 Col15a1O35206 1367 aa13.46□□□□□ -0.25
Lig1-211ENSMUST00000177588 Zkscan7E9PVW1 718 aa13.46□□□□□ -0.25
Lig1-211ENSMUST00000177588 Zfp251Q6PCX8 632 aa13.46□□□□□ -0.25
Lig1-211ENSMUST00000177588 Fbxo2Q80UW2 297 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms