RNA–Protein interactions for RNA: ENSMUST00000111454.3

Ccr9-201, Transcript of C-C chemokine receptor type 9, mousemouse

TSL 5 BASIC

Gene Ccr9, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-201ENSMUST00000111454 Ctr9Q62018 1173 aaKnown RBP7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Morc2aQ69ZX6 1030 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Fnbp4Q6ZQ03 1031 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Fam177a1Q8BR63 207 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Bag4Q8CI61 457 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Emilin2Q8K482 1074 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Cluap1Q8R3P7 413 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Rbm42Q91V81 474 aaKnown RBP7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Dnajc10Q9DC23 793 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Cdk12Q14AX6 1484 aaKnown RBP7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Marf1Q8BJ34 1730 aaKnown RBP7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Zfp597E9Q6S0 419 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 MycnP03966 462 aaKnown RBP7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Trim30aP15533 496 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Kif2aP28740 705 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 BcanQ61361 883 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 CtifQ6PEE2 600 aaKnown RBP7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Chaf1aQ9QWF0 911 aa7.98□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Nid2O88322 1403 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Nhsl1Q8CAF4 1587 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Gm10093D3YYI8 482 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Hdac1O09106 482 aaKnown RBP7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Mcm10Q0VBD2 885 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Fchsd2Q3USJ8 740 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Ddx41Q91VN6 622 aaKnown RBP7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Nsfl1cQ9CZ44 370 aaKnown RBP7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Lrp6O88572 1613 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Abca15E9PWH4 1668 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 CemipQ8BI06 1361 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Uhrf1bp1B2KF50 1429 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Fmnl2A2APV2 1086 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Ppp1r15aP17564 657 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Tmco5bQ80X59 307 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Nutm1Q8BHP2 1126 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Psrc1Q9D0P7 329 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Irx5Q9JKQ4 484 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Sh3bp5Q9Z131 463 aa7.97□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Uhrf1bp1lA2RSJ4 1457 aa7.96□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Slit2Q9R1B9 1521 aa7.96□□□□□ -1.13
Ccr9-201ENSMUST00000111454 Gm973E9Q295 1059 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Krtap10-4Q08EG8 221 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Maco1Q7TQE6 664 aaKnown RBP7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Phf20l1Q8CCJ9 1013 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Ulbp1Q8HWA3 334 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Kdm4cQ8VCD7 1054 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Noc3lQ8VI84 807 aaKnown RBP7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Zkscan5Q9Z1D8 819 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Gm11983V9GXS8 105 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 FancaQ9JL70 1439 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Rfx1P48377 963 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 G3bp1P97855 465 aaKnown RBP7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Hvcn1Q3U2S8 269 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Ccdc34Q3UI66 367 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Tmem132eQ6IEE6 982 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Znf771Q8BJ90 317 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 LsrQ99KG5 594 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Iqca1Q9CUL5 857 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 PtprvP70289 1705 aa7.96□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Pnmal2G3X9N3 661 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Card10P58660 1021 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Amotl2Q8K371 772 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Pcdhgc5Q91XW9 944 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Tet3Q8BG87 1668 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Lrriq3Q14DL3 633 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Taf3Q5HZG4 932 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Rsph6aQ8CDR2 708 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Cdc37l1Q9CZP7 335 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Cabp2Q9JLK4 216 aa7.95□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Znf541Q0GGX2 1363 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 TnrQ8BYI9 1358 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Bcl9lQ67FY2 1494 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 EzrP26040 586 aaKnown RBP7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Ercc3P49135 783 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Bach2P97303 839 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 4930548H24RikQ9D496 437 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Ccdc171E9Q1U1 1324 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 AU019823E9PUQ3 292 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Casq1O09165 405 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Hoxb7P09024 217 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Gabpb2P81069 414 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Sf3b2Q3UJB0 878 aaKnown RBP7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Plekhm2Q80TQ5 1018 aa7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 SetQ9EQU5 289 aaKnown RBP7.94□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Nfat5Q9WV30 1534 aa7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Siglec1Q62230 1695 aa7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 InhbeO08717 350 aa7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Nol11Q8BJW5 723 aaKnown RBP7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Cc2d1aQ8K1A6 943 aa7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Bloc1s4Q8VED2 215 aa7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Ubr1O70481 1757 aa7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Saxo1B1AXP3 476 aa7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 U2surpQ6NV83 1029 aaKnown RBP7.93□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Vamp4O70480 141 aa7.92□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Hoxc9P09633 260 aa7.92□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Zcwpw1Q6IR42 630 aa7.92□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Rassf4Q8CB96 322 aa7.92□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Serpina10Q8R121 448 aa7.92□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Gnai1B2RSH2 354 aa7.92□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Nucb2P81117 420 aa7.92□□□□□ -1.14
Ccr9-201ENSMUST00000111454 Q3UPC7 1272 aa7.92□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms