RNA–Protein interactions for RNA: ENSMUST00000111454.3

Ccr9-201, Transcript of C-C chemokine receptor type 9, mousemouse

TSL 5 BASIC

Gene Ccr9, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-201ENSMUST00000111454 Mapk8ip2Q9ERE9 830 aa20.06■□□□□ 0.8
Ccr9-201ENSMUST00000111454 Chic1Q8CBW7 227 aa18■□□□□ 0.47
Ccr9-201ENSMUST00000111454 GapdhsQ64467 440 aa16.31■□□□□ 0.2
Ccr9-201ENSMUST00000111454 Phf23Q8BSN5 401 aa15.88■□□□□ 0.13
Ccr9-201ENSMUST00000111454 Fam163aQ8CAA5 168 aa15.82■□□□□ 0.12
Ccr9-201ENSMUST00000111454 Gab3Q8BSM5 595 aa14.48□□□□□ -0.09
Ccr9-201ENSMUST00000111454 ArsiQ32KI9 573 aa14.07□□□□□ -0.16
Ccr9-201ENSMUST00000111454 Slc34a2Q9DBP0 697 aa14.06□□□□□ -0.16
Ccr9-201ENSMUST00000111454 Senp3Q9EP97 568 aaKnown RBP13.67□□□□□ -0.22
Ccr9-201ENSMUST00000111454 Plppr3Q7TPB0 716 aa13.41□□□□□ -0.26
Ccr9-201ENSMUST00000111454 Hoxd11P23813 323 aa12.89□□□□□ -0.35
Ccr9-201ENSMUST00000111454 Gm35339A0A140LHH9 1649 aa12.88□□□□□ -0.35
Ccr9-201ENSMUST00000111454 NischQ80TM9 1593 aa12.85□□□□□ -0.35
Ccr9-201ENSMUST00000111454 Cacnb1Q8R3Z5 597 aa12.84□□□□□ -0.35
Ccr9-201ENSMUST00000111454 Znf219Q6IQX8 726 aa12.82□□□□□ -0.36
Ccr9-201ENSMUST00000111454 Dnajc5bQ9CQ94 199 aa12.6□□□□□ -0.39
Ccr9-201ENSMUST00000111454 Slc4a5E9Q3M5 1116 aa12.51□□□□□ -0.41
Ccr9-201ENSMUST00000111454 Znf704Q9ERQ3 566 aa12.49□□□□□ -0.41
Ccr9-201ENSMUST00000111454 Abcc9P70170 1546 aa12.41□□□□□ -0.42
Ccr9-201ENSMUST00000111454 Abcc8B2RUS7 1588 aa12.37□□□□□ -0.43
Ccr9-201ENSMUST00000111454 Akt1s1Q9D1F4 257 aa12.27□□□□□ -0.44
Ccr9-201ENSMUST00000111454 Trap1aP19473 224 aa11.98□□□□□ -0.49
Ccr9-201ENSMUST00000111454 Znf703P0CL69 594 aa11.97□□□□□ -0.49
Ccr9-201ENSMUST00000111454 Ildr2B5TVM2 661 aa11.96□□□□□ -0.49
Ccr9-201ENSMUST00000111454 ScribQ80U72 1612 aa11.86□□□□□ -0.51
Ccr9-201ENSMUST00000111454 Rsph4aQ8BYM7 716 aa11.78□□□□□ -0.52
Ccr9-201ENSMUST00000111454 Rimbp2Q80U40 1072 aa11.74□□□□□ -0.53
Ccr9-201ENSMUST00000111454 Chrna2Q91X60 512 aa11.69□□□□□ -0.54
Ccr9-201ENSMUST00000111454 Ube2uB1AUC4 352 aa11.64□□□□□ -0.55
Ccr9-201ENSMUST00000111454 NacadQ5SWP3 1504 aa11.51□□□□□ -0.57
Ccr9-201ENSMUST00000111454 Kdm5dQ62240 1548 aa11.51□□□□□ -0.57
Ccr9-201ENSMUST00000111454 Rpgrip1Q9EPQ2 1331 aa11.51□□□□□ -0.57
Ccr9-201ENSMUST00000111454 Evx2P49749 475 aa11.42□□□□□ -0.58
Ccr9-201ENSMUST00000111454 Dcaf1Q80TR8 1506 aa11.38□□□□□ -0.59
Ccr9-201ENSMUST00000111454 Rhox8Q6VSS7 320 aa11.37□□□□□ -0.59
Ccr9-201ENSMUST00000111454 Prr29B1ARI9 187 aa11.34□□□□□ -0.59
Ccr9-201ENSMUST00000111454 Sycp2Q9CUU3 1500 aa11.28□□□□□ -0.6
Ccr9-201ENSMUST00000111454 Kcnn1Q9EQR3 537 aa11.23□□□□□ -0.61
Ccr9-201ENSMUST00000111454 Rb1cc1Q9ESK9 1588 aa11.21□□□□□ -0.62
Ccr9-201ENSMUST00000111454 Krtap4-1Q3UUY3 169 aa11.14□□□□□ -0.63
Ccr9-201ENSMUST00000111454 BicraF8VPZ9 1578 aa11.1□□□□□ -0.63
Ccr9-201ENSMUST00000111454 Baz1aO88379 1555 aa11.04□□□□□ -0.64
Ccr9-201ENSMUST00000111454 Rtl1Q7M732 1744 aa10.99□□□□□ -0.65
Ccr9-201ENSMUST00000111454 Ccdc180J3QNE4 1664 aa10.97□□□□□ -0.65
Ccr9-201ENSMUST00000111454 Crybg2B7ZCC2 1516 aa10.96□□□□□ -0.66
Ccr9-201ENSMUST00000111454 Zcchc6Q5BLK4 1491 aaKnown RBP10.93□□□□□ -0.66
Ccr9-201ENSMUST00000111454 Pcgf6Q99NA9 353 aa10.88□□□□□ -0.67
Ccr9-201ENSMUST00000111454 Acin1Q9JIX8 1338 aaKnown RBP10.84□□□□□ -0.67
Ccr9-201ENSMUST00000111454 Pds5bQ4VA53 1446 aaKnown RBP10.78□□□□□ -0.68
Ccr9-201ENSMUST00000111454 Myt1Q8CFC2 1127 aa10.75□□□□□ -0.69
Ccr9-201ENSMUST00000111454 Smarca2Q6DIC0 1577 aa10.72□□□□□ -0.69
Ccr9-201ENSMUST00000111454 Ehmt2Q9Z148 1263 aaKnown RBP10.71□□□□□ -0.69
Ccr9-201ENSMUST00000111454 Atad2bE9Q166 1460 aaKnown RBP10.7□□□□□ -0.7
Ccr9-201ENSMUST00000111454 Cecr2E9Q2Z1 1453 aa10.7□□□□□ -0.7
Ccr9-201ENSMUST00000111454 Lhx8O35652 367 aa10.69□□□□□ -0.7
Ccr9-201ENSMUST00000111454 Pip4p2Q9CZX7 257 aa10.69□□□□□ -0.7
Ccr9-201ENSMUST00000111454 A0A1Y7VJH8 109 aa10.68□□□□□ -0.7
Ccr9-201ENSMUST00000111454 Las1lA2BE28 776 aaKnown RBP10.68□□□□□ -0.7
Ccr9-201ENSMUST00000111454 Smarca4Q3TKT4 1613 aaKnown RBP10.64□□□□□ -0.71
Ccr9-201ENSMUST00000111454 Grwd1Q810D6 446 aaKnown RBP10.62□□□□□ -0.71
Ccr9-201ENSMUST00000111454 Thoc2B1AZI6 1594 aaKnown RBP10.62□□□□□ -0.71
Ccr9-201ENSMUST00000111454 Clcn6O35454 870 aa10.6□□□□□ -0.71
Ccr9-201ENSMUST00000111454 Ccdc136Q3TVA9 1136 aa10.6□□□□□ -0.71
Ccr9-201ENSMUST00000111454 Iqgap2Q3UQ44 1575 aa10.58□□□□□ -0.71
Ccr9-201ENSMUST00000111454 DiexfQ8BTT6 772 aaKnown RBP10.57□□□□□ -0.72
Ccr9-201ENSMUST00000111454 Ercc6F8VPZ5 1481 aa10.57□□□□□ -0.72
Ccr9-201ENSMUST00000111454 CenpbP27790 599 aa10.54□□□□□ -0.72
Ccr9-201ENSMUST00000111454 Egfem1Q8C088 590 aa10.54□□□□□ -0.72
Ccr9-201ENSMUST00000111454 Sox12Q04890 314 aa10.52□□□□□ -0.73
Ccr9-201ENSMUST00000111454 Kcna4Q61423 654 aa10.51□□□□□ -0.73
Ccr9-201ENSMUST00000111454 Gm11555B1AQ89 175 aa10.5□□□□□ -0.73
Ccr9-201ENSMUST00000111454 Cc2d2aQ8CFW7 1633 aa10.49□□□□□ -0.73
Ccr9-201ENSMUST00000111454 Foxp4Q9DBY0 795 aaKnown RBP10.49□□□□□ -0.73
Ccr9-201ENSMUST00000111454 Frmpd1A2AKB4 1549 aa10.47□□□□□ -0.73
Ccr9-201ENSMUST00000111454 Brd4Q9ESU6 1400 aaKnown RBP10.47□□□□□ -0.73
Ccr9-201ENSMUST00000111454 Wdr62Q3U3T8 1523 aa10.46□□□□□ -0.73
Ccr9-201ENSMUST00000111454 CftrP26361 1476 aa10.45□□□□□ -0.74
Ccr9-201ENSMUST00000111454 ArntlQ9WTL8 632 aa10.44□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Ttbk1Q6PCN3 1308 aa10.44□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Synj1Q8CHC4 1574 aa10.44□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Neurod1Q60867 357 aa10.44□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Ppargc1bQ8VHJ7 1014 aa10.43□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Cttnbp2B9EJA2 1648 aa10.41□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Fam135aQ6NS59 1506 aa10.4□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Phldb1Q6PDH0 1371 aaKnown RBP10.4□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Trim41Q5NCC3 630 aa10.4□□□□□ -0.74
Ccr9-201ENSMUST00000111454 Esf1Q3V1V3 845 aaKnown RBP10.38□□□□□ -0.75
Ccr9-201ENSMUST00000111454 HrcG5E8J6 738 aa10.37□□□□□ -0.75
Ccr9-201ENSMUST00000111454 Ubl4bQ9CQ84 188 aa10.36□□□□□ -0.75
Ccr9-201ENSMUST00000111454 Kank3Q9Z1P7 791 aa10.34□□□□□ -0.75
Ccr9-201ENSMUST00000111454 Zbtb7aO88939 569 aaKnown RBP10.33□□□□□ -0.76
Ccr9-201ENSMUST00000111454 1700123L14RikQ3V2K7 440 aa10.32□□□□□ -0.76
Ccr9-201ENSMUST00000111454 Supt5hO55201 1082 aaKnown RBP10.31□□□□□ -0.76
Ccr9-201ENSMUST00000111454 Gm11563B1AQ90 168 aa10.3□□□□□ -0.76
Ccr9-201ENSMUST00000111454 Krtap4-7Q9D732 168 aa10.3□□□□□ -0.76
Ccr9-201ENSMUST00000111454 Unc13aQ4KUS2 1712 aa10.29□□□□□ -0.76
Ccr9-201ENSMUST00000111454 Bcl11aQ9QYE3 773 aa10.26□□□□□ -0.77
Ccr9-201ENSMUST00000111454 Krtap28-10A0A1Y7VP58 119 aa10.24□□□□□ -0.77
Ccr9-201ENSMUST00000111454 Baz1bQ9Z277 1479 aa10.24□□□□□ -0.77
Ccr9-201ENSMUST00000111454 ArxO35085 564 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 109.7 ms