RNA–Protein interactions for RNA: ENSMUST00000111046.8

Bdnf-206, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,819 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-206ENSMUST00000111046 Jarid2Q62315 1234 aa10.47□□□□□ -0.73
Bdnf-206ENSMUST00000111046 Pdzd9Q9D9M4 266 aa10.47□□□□□ -0.73
Bdnf-206ENSMUST00000111046 Efcab2Q9CQ46 164 aa10.47□□□□□ -0.73
Bdnf-206ENSMUST00000111046 PnnO35691 725 aaKnown RBP10.46□□□□□ -0.73
Bdnf-206ENSMUST00000111046 Bend3Q6PAL0 825 aa10.46□□□□□ -0.73
Bdnf-206ENSMUST00000111046 Irgm2A0A140LIF8 407 aa10.46□□□□□ -0.73
Bdnf-206ENSMUST00000111046 Gsdma2Q32M21 443 aa10.46□□□□□ -0.73
Bdnf-206ENSMUST00000111046 Cnnm3Q32NY4 713 aa10.46□□□□□ -0.73
Bdnf-206ENSMUST00000111046 Tlr7P58681 1050 aa10.46□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Tubb6Q922F4 447 aa10.46□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Spef2Q8C9J3 1734 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Myd88P22366 296 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Zbtb45Q52KG4 520 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Cyp2d12Q8BVD2 504 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Polr3dQ91WD1 398 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Tns3Q5SSZ5 1440 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Lmtk3Q5XJV6 1424 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Cspp1B2RX88 1205 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Kif2cQ922S8 721 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Erc1Q99MI1 1120 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Dmrtc1Q9D9R7 182 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Card10P58660 1021 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Pdzrn3Q69ZS0 1063 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Phf23Q8BSN5 401 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Cep57l1Q8VDS7 400 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Bcl11bQ99PV8 884 aa10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Rreb1Q3UH06 1700 aaKnown RBP10.45□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Gm973E9Q295 1059 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Pmfbp1Q9WVQ0 1022 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Map2P20357 1828 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Tmem2Q5FWI3 1383 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Camta1A2A891 1682 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Rbm8a2A0A0N4SUH6 174 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Rbm8aQ9CWZ3 174 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 4931400O07RikQ9D4M5 137 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Mlh1Q9JK91 760 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Edc3Q8K2D3 508 aaKnown RBP10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Cwc25Q9DBF7 416 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Stx6Q9JKK1 255 aa10.44□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ppp6r1Q7TSI3 856 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Atf7Q8R0S1 413 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Col1a2Q01149 1372 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Cplx2P84086 134 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Kif20aP97329 887 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Tceanc2Q8R2M0 207 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Antxr1Q9CZ52 562 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 PdcQ9QW08 244 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ccdc173A0JLY1 547 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Rbbp8nlA2ABX0 614 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 F2rP30558 430 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ltv1Q6NSQ7 470 aaKnown RBP10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Samm50Q8BGH2 469 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Txnrd1Q9JMH6 613 aa10.43□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ddx46Q569Z5 1032 aaKnown RBP10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Tgfb1i1Q62219 461 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Asic4Q7TNS7 539 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Pdcl3Q8BVF2 240 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Gm45015A0A140LII9 184 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Gm18336A0A140LIU8 765 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 CrcpO35427 148 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 HellsQ60848 821 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ifit2Q64112 472 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Rapgef3Q8VCC8 918 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ccdc47Q9D024 483 aaKnown RBP10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Zeb2Q9R0G7 1215 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Gadd45bP22339 160 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 EspnlQ3UYR4 1005 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Olfml1Q8BSH2 233 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Golim4Q8BXA1 655 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Tmem119Q8R138 280 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Abcc12Q80WJ6 1366 aa10.42□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Rad50P70388 1312 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Sipa1l2Q80TE4 1722 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Mdm2P23804 489 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Utp18Q5SSI6 552 aaKnown RBP10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Phlpp1Q8CHE4 1687 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 NmiO35309 314 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Il4rP16382 810 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Fez1Q8K0X8 392 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Adam1bQ8R534 806 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Med4Q9CQA5 270 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Cfap99A0A140LIX9 648 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Paxip1Q6NZQ4 1056 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Fsd1Q7TPM6 496 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Tti2Q8BGV4 512 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ppp1r37Q8BKR5 712 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Tmx3Q8BXZ1 456 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Srek1Q8BZX4 494 aaKnown RBP10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Nup88Q8CEC0 753 aaKnown RBP10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Nphp3Q7TNH6 1325 aa10.41□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Robo1O89026 1612 aa10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Hap1O35668 628 aa10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Nlrp3Q8R4B8 1033 aa10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Abcc10Q8R4P9 1501 aa10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Trim34bJ3QNR8 485 aa10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Cplx1P63040 134 aa10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ccnl1Q52KE7 532 aaKnown RBP10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ccdc66Q6NS45 935 aa10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Ak2Q9WTP6 239 aa10.4□□□□□ -0.74
Bdnf-206ENSMUST00000111046 Krt85Q9Z2T6 507 aa10.4□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms