RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 DonsonQ9QXP4 560 aa17.5■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Aldh8a1Q8BH00 487 aa17.5■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Znf287Q9EQB9 759 aa17.5■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Magi1Q6RHR9 1471 aa17.5■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Evi5lH3BKQ3 813 aa17.5■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Ano2Q8CFW1 1002 aa17.5■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Bloc1s4Q8VED2 215 aa17.5■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Nup133Q8R0G9 1155 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Calml4Q91WQ9 153 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Fam135aQ6NS59 1506 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Tubb4bP68372 445 aaKnown RBP17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Ddx46Q569Z5 1032 aaKnown RBP17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Klhl10Q9D5V2 608 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Ercc3P49135 783 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Iffo1Q8BXL9 562 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Tmx3Q8BXZ1 456 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Tyro3P55144 880 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Nlrp3Q8R4B8 1033 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Slx4ipQ9D7Y9 413 aa17.49■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Ppfibp1Q8C8U0 969 aaKnown RBP17.48■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Slc7a3P70423 618 aa17.48■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Rad50P70388 1312 aa17.48■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Traf3ip1Q149C2 625 aa17.48■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Tbc1d2bQ3U0J8 965 aa17.48■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Ddx10Q80Y44 875 aaKnown RBP17.48■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Hip1rQ9JKY5 1068 aa17.48■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Elp1Q7TT37 1333 aaKnown RBP17.48■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Soga3Q6NZL0 945 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Ccdc121E9Q6D3 323 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Irf9Q61179 399 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 IqcgQ80W32 419 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Vps37dQ810I0 261 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Zfp251Q6PCX8 632 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Uchl5Q9WUP7 329 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Nucb1Q02819 459 aaKnown RBP17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Chpf2Q3UU43 768 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Tbc1d7Q9D0K0 293 aa17.47■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Vps37cQ8R105 352 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 NgdnQ9DB96 315 aaKnown RBP17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Mlh3A0A1Y7VMP7 1443 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Metap2O08663 478 aaKnown RBP17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Klhl30Q8C3F7 581 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Nphp3Q7TNH6 1325 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Syt1P46096 421 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Bcl11bQ99PV8 884 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Hdhd2Q3UGR5 259 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Zkscan4Q5SZT6 480 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Arhgef18Q6P9R4 1021 aa17.46■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Igf1rQ60751 1373 aa17.46■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Caskin1Q6P9K8 1431 aa17.46■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Ccdc162pQ0VG85 912 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Gnat3Q3V3I2 354 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Echdc1Q9D9V3 322 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Pde4bB1AWC9 736 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Aplp1Q03157 653 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Rbm8a2A0A0N4SUH6 174 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Zbtb21E9Q444 1094 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Q3UJC8 639 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Rbm8aQ9CWZ3 174 aa17.45■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Sf3b2Q3UJB0 878 aaKnown RBP17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 EappQ5BU09 281 aa17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Cavin2Q63918 418 aaKnown RBP17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Tubb5P99024 444 aaKnown RBP17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 StambpQ9CQ26 424 aa17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Esyt1Q3U7R1 1092 aaKnown RBP17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Ift88Q61371 824 aa17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 U2af1l4Q8BGJ9 220 aa17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Fam107bQ3TGF2 131 aa17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Ccne1Q61457 408 aa17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 4921504E06RikQ8CET2 560 aa17.44■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Nop53Q8BK35 484 aaKnown RBP17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Egfem1Q8C088 590 aa17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Gtpbp4Q99ME9 634 aaKnown RBP17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Nfxl1E9Q8I7 918 aaKnown RBP17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Pip4k2bQ80XI4 416 aa17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Gadd45bP22339 160 aa17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Gm21985Q6P6P5 1106 aa17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Hook3Q8BUK6 718 aa17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Spata24Q6P926 205 aa17.43■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Map3k2Q61083 619 aa17.42■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Clcn1Q64347 994 aa17.42■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Ddx27Q921N6 760 aaKnown RBP17.42■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Olr1Q9EQ09 363 aa17.42■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Fam50bQ9WTJ8 334 aa17.42■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Gzf1Q4VBD9 706 aa17.42■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Ccdc42Q5SV66 316 aa17.42■□□□□ 0.38
Col2a1-201ENSMUST00000023123 ApobrQ8VBT6 942 aa17.42■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Ppp1r10Q80W00 888 aaKnown RBP17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Idi2Q8BFZ6 227 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Shtn1Q8K2Q9 631 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 ZgpatQ8VDM1 511 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Irx4Q9QY61 515 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Il4rP16382 810 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Atp8b2P98199 1209 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Fam177a1Q8BR63 207 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Vps16Q920Q4 839 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Homer1Q9Z2Y3 366 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Zfp853A0A1D5RM95 733 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Ppfibp2O35711 882 aa17.41■□□□□ 0.38
Col2a1-201ENSMUST00000023123 Nf2P46662 596 aa17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms