RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G TY1B-AO13527 1196 aaKnown RBP3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G CHO2P05374 869 aaKnown RBP3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G PDE1P22434 369 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G SFP1P32432 683 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G SPT23P35210 1082 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G LEO1P38439 464 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G CRP1P38845 465 aaKnown RBP3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G RTS1P38903 757 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G IRC8P47046 822 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G FOL1P53848 824 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G YMR206WQ03695 313 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G NSE5Q03718 556 aa3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G SSL1Q04673 461 aaPredicted RBP3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G PDH1Q12428 516 aaKnown RBP3.86□□□□□ -1.79
tC(GCA)GtC(GCA)G CET1O13297 549 aaPredicted RBP3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G SIR1P21691 654 aa3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G UBC1P21734 215 aaKnown RBP3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G RAD27P26793 382 aa3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G POL12P38121 705 aaPredicted RBP3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G KTR3P38130 404 aaPredicted RBP3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G DUG1P43616 481 aaKnown RBP3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G ACF4P47129 309 aa3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G ALT1P52893 592 aa3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G YNL134CP53912 376 aaKnown RBP3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G VPS30Q02948 557 aa3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G CSI1Q04368 295 aa3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G PCD1Q12524 340 aa3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G HRP1Q99383 534 aaKnown RBP3.85□□□□□ -1.79
tC(GCA)GtC(GCA)G NUC1P08466 329 aa3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G COQ1P18900 473 aa3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G SEC15P22224 910 aa3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G CLB5P30283 435 aa3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G SLN1P39928 1220 aaPredicted RBP3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G YER158CP40095 573 aa3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G ALT2P52892 507 aa3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G CSL4P53859 292 aaPredicted RBP3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G JIP5Q06214 492 aaPredicted RBP3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G OPT2Q06593 877 aa3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G PKH2Q12236 1081 aaKnown RBP3.84□□□□□ -1.79
tC(GCA)GtC(GCA)G ADE4P04046 510 aaKnown RBP3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G MAS1P10507 462 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G BUD2P33314 1104 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G TVP38P36164 337 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G PCF11P39081 626 aaPredicted RBP3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G YEL025CP39991 1188 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G ENT3P47160 408 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G YGR130CP53278 816 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G TPO2P53283 614 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G SPO1P53541 631 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G KAR5Q04746 504 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G PLP2Q12017 286 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G CDC53Q12018 815 aaKnown RBP3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G YOR022CQ12204 715 aa3.83□□□□□ -1.8
tC(GCA)GtC(GCA)G SCP160P06105 1222 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
tC(GCA)GtC(GCA)G CIT2P08679 460 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G TEC1P18412 486 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G KIP1P28742 1111 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G UGA4P32837 571 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G GEF1P37020 779 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G YPP1P46951 817 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G KRE33P53914 1056 aaKnown RBP3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G YML083CQ04526 418 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G SVF1Q05515 481 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G HEL2Q05580 639 aaKnown RBP3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G YDL206WQ12424 762 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G OSH2Q12451 1283 aa3.82□□□□□ -1.8
tC(GCA)GtC(GCA)G ADE2P21264 571 aaKnown RBP3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G SPO11P23179 398 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G RIT1P23796 513 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G PGS1P25578 521 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G RME1P32338 300 aaKnown RBP3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G DUG2P38149 878 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G GIP1P38229 639 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G HMF1P40037 129 aaKnown RBP3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G LSB6P42951 607 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G ULI1P43604 169 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G RSM26P47141 266 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G NUT1P53114 1132 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G NMA2P53204 395 aa3.81□□□□□ -1.8
tC(GCA)GtC(GCA)G NAR1P23503 491 aaKnown RBP3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G WBP1P33767 430 aaKnown RBP3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G SSF1P38789 453 aaPredicted RBP3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G YEL023CP39992 682 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G EPS1P40557 701 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G YPS6P40583 537 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G BDP1P46678 594 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G LSB1P53281 241 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G SLG1P54867 378 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G NAM8Q00539 523 aaKnown RBP3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G ERF2Q06551 359 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G YDL129WQ07555 291 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G ESC8Q08119 714 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G MPD2Q99316 277 aa3.8□□□□□ -1.8
tC(GCA)GtC(GCA)G RPS9AO13516 197 aaKnown RBP3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G CIT1P00890 479 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G RAD2P07276 1031 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G RPL43AP0CX25 92 aaKnown RBP3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G RPL43BP0CX26 92 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G STE11P23561 717 aa3.79□□□□□ -1.8
tC(GCA)GtC(GCA)G RSA4P25382 515 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms