RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W HVG1P0CE11 249 aa1.97□□□□□ -2.09
SKI3YPR189W RAD18P10862 487 aa1.97□□□□□ -2.09
SKI3YPR189W VBA3P25594 458 aa1.97□□□□□ -2.09
SKI3YPR189W MTC2P34246 357 aa1.97□□□□□ -2.09
SKI3YPR189W BAP2P38084 609 aa1.97□□□□□ -2.09
SKI3YPR189W PAN5P38787 379 aa1.97□□□□□ -2.09
SKI3YPR189W MTR4P47047 1073 aaKnown RBP1.97□□□□□ -2.09
SKI3YPR189W YNL193WP53870 558 aa1.97□□□□□ -2.09
SKI3YPR189W YML082WQ04533 649 aaKnown RBP1.97□□□□□ -2.09
SKI3YPR189W SPP382Q06411 708 aaPredicted RBP1.97□□□□□ -2.09
SKI3YPR189W IRE1P32361 1115 aa1.96□□□□□ -2.1
SKI3YPR189W PIN4P34217 668 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SKI3YPR189W RER2P35196 286 aa1.96□□□□□ -2.1
SKI3YPR189W MPE1P35728 441 aaKnown RBP1.96□□□□□ -2.1
SKI3YPR189W NCL1P38205 684 aaKnown RBP1.96□□□□□ -2.1
SKI3YPR189W CUS1Q02554 436 aaPredicted RBP1.96□□□□□ -2.1
SKI3YPR189W TAF8Q03750 510 aa1.96□□□□□ -2.1
SKI3YPR189W HDA2Q06629 674 aa1.96□□□□□ -2.1
SKI3YPR189W PHR1P05066 565 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SKI3YPR189W SEC23P15303 768 aaKnown RBP1.96□□□□□ -2.1
SKI3YPR189W TFC4P33339 1025 aa1.96□□□□□ -2.1
SKI3YPR189W TYS1P36421 394 aaKnown RBP1.96□□□□□ -2.1
SKI3YPR189W HST3P53687 447 aa1.96□□□□□ -2.1
SKI3YPR189W SIW14P53965 281 aa1.96□□□□□ -2.1
SKI3YPR189W EMG1Q06287 252 aaKnown RBP1.96□□□□□ -2.1
SKI3YPR189W YPR071WQ12346 211 aa1.96□□□□□ -2.1
SKI3YPR189W NKP1Q12493 238 aa1.96□□□□□ -2.1
SKI3YPR189W TAF13P11747 167 aa1.96□□□□□ -2.1
SKI3YPR189W PRP5P21372 849 aaPredicted RBP1.96□□□□□ -2.1
SKI3YPR189W SYP1P25623 870 aaKnown RBP1.96□□□□□ -2.1
SKI3YPR189W PRP19P32523 503 aaKnown RBP1.96□□□□□ -2.1
SKI3YPR189W BET3P36149 193 aa1.96□□□□□ -2.1
SKI3YPR189W RIM4P38741 713 aa1.96□□□□□ -2.1
SKI3YPR189W YJL171CP46992 396 aa1.96□□□□□ -2.1
SKI3YPR189W YGL140CP53120 1219 aa1.96□□□□□ -2.1
SKI3YPR189W YNR014WP53719 212 aa1.96□□□□□ -2.1
SKI3YPR189W COG4Q06096 861 aa1.96□□□□□ -2.1
SKI3YPR189W AOS1Q06624 347 aa1.96□□□□□ -2.1
SKI3YPR189W RKM4Q12504 494 aa1.96□□□□□ -2.1
SKI3YPR189W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
SKI3YPR189W RAD53P22216 821 aa1.95□□□□□ -2.1
SKI3YPR189W GFD2P25370 566 aaKnown RBP1.95□□□□□ -2.1
SKI3YPR189W MRT4P33201 236 aaKnown RBP1.95□□□□□ -2.1
SKI3YPR189W PTH2P34222 208 aa1.95□□□□□ -2.1
SKI3YPR189W YRO2P38079 344 aa1.95□□□□□ -2.1
SKI3YPR189W DOT6P40059 670 aaKnown RBP1.95□□□□□ -2.1
SKI3YPR189W GIR2Q03768 265 aaPredicted RBP1.95□□□□□ -2.1
SKI3YPR189W MSH6Q03834 1242 aa1.95□□□□□ -2.1
SKI3YPR189W RSC2Q06488 889 aa1.95□□□□□ -2.1
SKI3YPR189W INH1P01097 85 aa1.95□□□□□ -2.1
SKI3YPR189W PDC6P26263 563 aaKnown RBP1.95□□□□□ -2.1
SKI3YPR189W PRE3P38624 215 aa1.95□□□□□ -2.1
SKI3YPR189W PEA2P40091 420 aa1.95□□□□□ -2.1
SKI3YPR189W YIL165CP40446 119 aa1.95□□□□□ -2.1
SKI3YPR189W SAP155P43612 1002 aa1.95□□□□□ -2.1
SKI3YPR189W TIF35Q04067 274 aaKnown RBP1.95□□□□□ -2.1
SKI3YPR189W DUS3Q06053 668 aaKnown RBP1.95□□□□□ -2.1
SKI3YPR189W TY4B-HP0C2J7 1802 aa1.95□□□□□ -2.1
SKI3YPR189W COBP00163 385 aa1.95□□□□□ -2.1
SKI3YPR189W SST2P11972 698 aaKnown RBP1.95□□□□□ -2.1
SKI3YPR189W TOP3P13099 656 aa1.95□□□□□ -2.1
SKI3YPR189W DUR3P33413 735 aa1.95□□□□□ -2.1
SKI3YPR189W YAP1801P38856 637 aa1.95□□□□□ -2.1
SKI3YPR189W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
SKI3YPR189W NFS1P25374 497 aa1.94□□□□□ -2.1
SKI3YPR189W JNM1P36224 373 aa1.94□□□□□ -2.1
SKI3YPR189W XDJ1P39102 459 aa1.94□□□□□ -2.1
SKI3YPR189W POL5P39985 1022 aaKnown RBP1.94□□□□□ -2.1
SKI3YPR189W IES5P40060 125 aa1.94□□□□□ -2.1
SKI3YPR189W VPS27P40343 622 aaKnown RBP1.94□□□□□ -2.1
SKI3YPR189W NEO1P40527 1151 aa1.94□□□□□ -2.1
SKI3YPR189W FET4P40988 552 aa1.94□□□□□ -2.1
SKI3YPR189W PFD1P46988 109 aa1.94□□□□□ -2.1
SKI3YPR189W HNT2P49775 206 aa1.94□□□□□ -2.1
SKI3YPR189W GUD1Q07729 489 aa1.94□□□□□ -2.1
SKI3YPR189W HBN1Q96VH4 193 aa1.94□□□□□ -2.1
SKI3YPR189W GEA1P47102 1408 aaPredicted RBP1.94□□□□□ -2.1
SKI3YPR189W DPS1P04802 557 aaKnown RBP1.94□□□□□ -2.1
SKI3YPR189W PIF1P07271 859 aa1.94□□□□□ -2.1
SKI3YPR189W MEF1P25039 761 aa1.94□□□□□ -2.1
SKI3YPR189W NAB2P32505 525 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SKI3YPR189W AAD14P42884 376 aa1.94□□□□□ -2.1
SKI3YPR189W CNN1P43618 361 aa1.94□□□□□ -2.1
SKI3YPR189W YGR021WP53212 290 aa1.94□□□□□ -2.1
SKI3YPR189W RAT1Q02792 1006 aaKnown RBP1.94□□□□□ -2.1
SKI3YPR189W PSH1Q12161 406 aa1.94□□□□□ -2.1
SKI3YPR189W CFT1Q06632 1357 aaKnown RBP1.94□□□□□ -2.1
SKI3YPR189W PGI1P12709 554 aaKnown RBP1.94□□□□□ -2.1
SKI3YPR189W MSD1P15179 658 aaKnown RBP1.94□□□□□ -2.1
SKI3YPR189W NPR1P22211 790 aa1.94□□□□□ -2.1
SKI3YPR189W ALG2P43636 503 aa1.94□□□□□ -2.1
SKI3YPR189W PTK2P47116 818 aaKnown RBP1.94□□□□□ -2.1
SKI3YPR189W CTR9P89105 1077 aa1.94□□□□□ -2.1
SKI3YPR189W MLS1P30952 554 aa1.94□□□□□ -2.1
SKI3YPR189W YKL222CP35995 705 aa1.94□□□□□ -2.1
SKI3YPR189W SHM1P37292 490 aaPredicted RBP1.94□□□□□ -2.1
SKI3YPR189W IES1P43579 692 aa1.94□□□□□ -2.1
SKI3YPR189W MSN5P52918 1224 aa1.94□□□□□ -2.1
SKI3YPR189W YNL034WP53963 612 aa1.94□□□□□ -2.1
SKI3YPR189W YNL018CP53976 612 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms