RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C CNS1P33313 385 aa6.59□□□□□ -1.35
VPS4YPR173C CTM1P38818 585 aa6.59□□□□□ -1.35
VPS4YPR173C AKR1P39010 764 aa6.59□□□□□ -1.35
VPS4YPR173C YML020WQ03722 664 aa6.59□□□□□ -1.35
VPS4YPR173C HMI1Q12039 706 aa6.59□□□□□ -1.35
VPS4YPR173C WTM2Q12206 467 aa6.59□□□□□ -1.35
VPS4YPR173C RRI2Q12348 645 aa6.59□□□□□ -1.35
VPS4YPR173C ADR1P07248 1323 aa6.58□□□□□ -1.36
VPS4YPR173C SWI5P08153 709 aa6.58□□□□□ -1.36
VPS4YPR173C UBP1P25037 809 aa6.58□□□□□ -1.36
VPS4YPR173C SWI4P25302 1093 aaKnown RBP6.58□□□□□ -1.36
VPS4YPR173C SWE1P32944 819 aa6.58□□□□□ -1.36
VPS4YPR173C YET1P35723 206 aa6.58□□□□□ -1.36
VPS4YPR173C BCD1P38772 366 aa6.58□□□□□ -1.36
VPS4YPR173C CWC15Q03772 175 aaKnown RBP6.58□□□□□ -1.36
VPS4YPR173C KAR5Q04746 504 aa6.58□□□□□ -1.36
VPS4YPR173C YPL225WQ08971 146 aaKnown RBP6.58□□□□□ -1.36
VPS4YPR173C NUR1Q12066 484 aa6.58□□□□□ -1.36
VPS4YPR173C GET3Q12154 354 aaKnown RBP6.58□□□□□ -1.36
VPS4YPR173C YRF1-3P0CX14 1859 aa6.58□□□□□ -1.36
VPS4YPR173C YRF1-7P0CX15 1859 aa6.58□□□□□ -1.36
VPS4YPR173C YRF1-6P53819 1859 aa6.58□□□□□ -1.36
VPS4YPR173C CDC37P06101 506 aaKnown RBP6.57□□□□□ -1.36
VPS4YPR173C CYT1P07143 309 aa6.57□□□□□ -1.36
VPS4YPR173C CDC6P09119 513 aa6.57□□□□□ -1.36
VPS4YPR173C SPO11P23179 398 aa6.57□□□□□ -1.36
VPS4YPR173C SRB4P32569 687 aa6.57□□□□□ -1.36
VPS4YPR173C SPT8P38915 602 aa6.57□□□□□ -1.36
VPS4YPR173C EFM4P40516 257 aa6.57□□□□□ -1.36
VPS4YPR173C ERG5P54781 538 aa6.57□□□□□ -1.36
VPS4YPR173C PUN1Q06991 263 aa6.57□□□□□ -1.36
VPS4YPR173C NOP6Q07623 225 aaKnown RBP6.57□□□□□ -1.36
VPS4YPR173C HAT1Q12341 374 aa6.57□□□□□ -1.36
VPS4YPR173C NBL1Q3E7Y6 73 aa6.57□□□□□ -1.36
VPS4YPR173C MTF2P10849 440 aa6.56□□□□□ -1.36
VPS4YPR173C YKL133CP36066 463 aa6.56□□□□□ -1.36
VPS4YPR173C SMF1P38925 575 aa6.56□□□□□ -1.36
VPS4YPR173C DLD3P39976 496 aaKnown RBP6.56□□□□□ -1.36
VPS4YPR173C SHQ1P40486 507 aaPredicted RBP6.56□□□□□ -1.36
VPS4YPR173C PXA1P41909 870 aa6.56□□□□□ -1.36
VPS4YPR173C YGR237CP50089 785 aa6.56□□□□□ -1.36
VPS4YPR173C VPS72Q03388 795 aa6.56□□□□□ -1.36
VPS4YPR173C UTP5Q04177 643 aaKnown RBP6.56□□□□□ -1.36
VPS4YPR173C SFH1Q06168 426 aa6.56□□□□□ -1.36
VPS4YPR173C MMR1Q06324 491 aa6.56□□□□□ -1.36
VPS4YPR173C PPM2Q08282 695 aa6.56□□□□□ -1.36
VPS4YPR173C NEW1Q08972 1196 aaKnown RBP6.56□□□□□ -1.36
VPS4YPR173C RRP6Q12149 733 aaKnown RBP6.56□□□□□ -1.36
VPS4YPR173C ARG82P07250 355 aa6.55□□□□□ -1.36
VPS4YPR173C ARD1P07347 238 aaPredicted RBP6.55□□□□□ -1.36
VPS4YPR173C SRP54P20424 541 aaKnown RBP6.55□□□□□ -1.36
VPS4YPR173C VPS1P21576 704 aaKnown RBP6.55□□□□□ -1.36
VPS4YPR173C ECM32P32644 1121 aaKnown RBP6.55□□□□□ -1.36
VPS4YPR173C SWH1P35845 1188 aa6.55□□□□□ -1.36
VPS4YPR173C SHM1P37292 490 aaPredicted RBP6.55□□□□□ -1.36
VPS4YPR173C TPS3P38426 1054 aaKnown RBP6.55□□□□□ -1.36
VPS4YPR173C SAP1P39955 897 aaKnown RBP6.55□□□□□ -1.36
VPS4YPR173C AAD14P42884 376 aa6.55□□□□□ -1.36
VPS4YPR173C MIC19P43594 170 aa6.55□□□□□ -1.36
VPS4YPR173C IRC8P47046 822 aa6.55□□□□□ -1.36
VPS4YPR173C YJR079WP47126 109 aa6.55□□□□□ -1.36
VPS4YPR173C ALD2P47771 506 aa6.55□□□□□ -1.36
VPS4YPR173C GDE1Q02979 1223 aa6.55□□□□□ -1.36
VPS4YPR173C PRP3Q03338 469 aaPredicted RBP6.55□□□□□ -1.36
VPS4YPR173C EBS1Q03466 884 aaKnown RBP6.55□□□□□ -1.36
VPS4YPR173C YLR287CQ05881 355 aa6.55□□□□□ -1.36
VPS4YPR173C YOR223WQ12015 292 aa6.55□□□□□ -1.36
VPS4YPR173C RMP1Q12530 201 aa6.55□□□□□ -1.36
VPS4YPR173C POM152P39685 1337 aa6.55□□□□□ -1.36
VPS4YPR173C CDC8P00572 216 aa6.54□□□□□ -1.36
VPS4YPR173C COQ1P18900 473 aa6.54□□□□□ -1.36
VPS4YPR173C FAS2P19097 1887 aaKnown RBP6.54□□□□□ -1.36
VPS4YPR173C CKI1P20485 582 aa6.54□□□□□ -1.36
VPS4YPR173C GRX1P25373 110 aaKnown RBP6.54□□□□□ -1.36
VPS4YPR173C HIR1P32479 840 aa6.54□□□□□ -1.36
VPS4YPR173C SWI3P32591 825 aa6.54□□□□□ -1.36
VPS4YPR173C RRP8P38961 392 aaKnown RBP6.54□□□□□ -1.36
VPS4YPR173C UTP7P40055 554 aaKnown RBP6.54□□□□□ -1.36
VPS4YPR173C IOC3P43596 787 aa6.54□□□□□ -1.36
VPS4YPR173C RTC4P53850 401 aa6.54□□□□□ -1.36
VPS4YPR173C NGL3Q03210 505 aa6.54□□□□□ -1.36
VPS4YPR173C EIS1Q05050 843 aaKnown RBP6.54□□□□□ -1.36
VPS4YPR173C PNP1Q05788 311 aa6.54□□□□□ -1.36
VPS4YPR173C STE23Q06010 1027 aa6.54□□□□□ -1.36
VPS4YPR173C CEX1Q12453 761 aa6.54□□□□□ -1.36
VPS4YPR173C PTC5Q12511 572 aa6.54□□□□□ -1.36
VPS4YPR173C TOP1P04786 769 aa6.53□□□□□ -1.36
VPS4YPR173C RAD1P06777 1100 aa6.53□□□□□ -1.36
VPS4YPR173C SPO12P17123 173 aa6.53□□□□□ -1.36
VPS4YPR173C RAD57P25301 460 aa6.53□□□□□ -1.36
VPS4YPR173C MAL31P38156 614 aa6.53□□□□□ -1.36
VPS4YPR173C YSW1P38280 609 aa6.53□□□□□ -1.36
VPS4YPR173C MIP6P38760 659 aaKnown RBP6.53□□□□□ -1.36
VPS4YPR173C RIO2P40160 425 aaKnown RBP6.53□□□□□ -1.36
VPS4YPR173C PTK2P47116 818 aaKnown RBP6.53□□□□□ -1.36
VPS4YPR173C RPS15Q01855 142 aaKnown RBP6.53□□□□□ -1.36
VPS4YPR173C NGR1P32831 672 aaKnown RBP6.52□□□□□ -1.37
VPS4YPR173C RXT2P38255 430 aa6.52□□□□□ -1.37
VPS4YPR173C SIC1P38634 284 aa6.52□□□□□ -1.37
VPS4YPR173C GLO3P38682 493 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms