RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	NAN1	Q02931	896 aa	Known RBP	7.12	□□□□□ -1.27
TFB4	YPR056W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.12	□□□□□ -1.27	not detected
TFB4	YPR056W	RKM2	Q03942	479 aa		7.12	□□□□□ -1.27
TFB4	YPR056W	LAP2	Q10740	671 aa		7.12	□□□□□ -1.27
TFB4	YPR056W	TMA17	Q12513	150 aa		7.12	□□□□□ -1.27
TFB4	YPR056W	HXK1	P04806	485 aa	Known RBP	7.11	□□□□□ -1.27
TFB4	YPR056W	ATP4	P05626	244 aa		7.11	□□□□□ -1.27
TFB4	YPR056W	ADP1	P25371	1049 aa		7.11	□□□□□ -1.27
TFB4	YPR056W	YAP1801	P38856	637 aa		7.11	□□□□□ -1.27
TFB4	YPR056W	PEX7	P39108	375 aa		7.11	□□□□□ -1.27
TFB4	YPR056W	IES5	P40060	125 aa		7.11	□□□□□ -1.27
TFB4	YPR056W	PUS7	Q08647	676 aa	Known RBP	7.11	□□□□□ -1.27
TFB4	YPR056W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.1	□□□□□ -1.27	not detected
TFB4	YPR056W	YEF3	P16521	1044 aa	Known RBP	7.1	□□□□□ -1.27
TFB4	YPR056W	MUM2	P38236	366 aa		7.1	□□□□□ -1.27
TFB4	YPR056W	XKS1	P42826	600 aa		7.1	□□□□□ -1.27
TFB4	YPR056W	YGL140C	P53120	1219 aa		7.1	□□□□□ -1.27
TFB4	YPR056W	TOS4	Q06266	489 aa		7.1	□□□□□ -1.27
TFB4	YPR056W	TDA5	Q06417	326 aa	Known RBP	7.1	□□□□□ -1.27
TFB4	YPR056W	INH1	P01097	85 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	PIF1	P07271	859 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	MPH2	P0CD99	609 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	RET1	P22276	1149 aa	Known RBP	7.09	□□□□□ -1.27
TFB4	YPR056W	HIR1	P32479	840 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	JNM1	P36224	373 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	ATG14	P38270	344 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	NMD3	P38861	518 aa	Known RBP	7.09	□□□□□ -1.27
TFB4	YPR056W	NIT1	P40447	199 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	FAF1	P40546	346 aa	Predicted RBP	7.09	□□□□□ -1.27
TFB4	YPR056W	SND1	Q04007	877 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	DFG16	Q99234	619 aa		7.09	□□□□□ -1.27
TFB4	YPR056W	FOB1	O13329	566 aa		7.08	□□□□□ -1.28
TFB4	YPR056W	SEC23	P15303	768 aa	Known RBP	7.08	□□□□□ -1.28
TFB4	YPR056W	HSP78	P33416	811 aa		7.08	□□□□□ -1.28
TFB4	YPR056W	YKL222C	P35995	705 aa		7.08	□□□□□ -1.28
TFB4	YPR056W	POL12	P38121	705 aa	Predicted RBP	7.08	□□□□□ -1.28
TFB4	YPR056W	YJR120W	P47157	116 aa		7.08	□□□□□ -1.28
TFB4	YPR056W	YLR257W	Q06146	321 aa	Known RBP	7.08	□□□□□ -1.28
TFB4	YPR056W	HRK1	Q08732	759 aa	Known RBP	7.08	□□□□□ -1.28
TFB4	YPR056W	RRI2	Q12348	645 aa		7.08	□□□□□ -1.28
TFB4	YPR056W	ERR1	P0CX10	437 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	ERR2	P0CX11	437 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	CYC8	P14922	966 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	PRI2	P20457	528 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	LRG1	P35688	1017 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	ADD66	P36040	267 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	YHR020W	P38708	688 aa	Known RBP	7.07	□□□□□ -1.28
TFB4	YPR056W	YGR122W	P53272	402 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	SSY1	Q03770	852 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	TPP1	Q03796	238 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	RSA3	Q05942	220 aa	Known RBP	7.07	□□□□□ -1.28
TFB4	YPR056W	FLC1	Q08967	793 aa		7.07	□□□□□ -1.28
TFB4	YPR056W	CIT1	P00890	479 aa		7.06	□□□□□ -1.28
TFB4	YPR056W	RPL8A	P17076	256 aa	Known RBP	7.06	□□□□□ -1.28
TFB4	YPR056W	SFP1	P32432	683 aa		7.06	□□□□□ -1.28
TFB4	YPR056W	FAA3	P39002	694 aa		7.06	□□□□□ -1.28
TFB4	YPR056W	MCD1	Q12158	566 aa		7.06	□□□□□ -1.28
TFB4	YPR056W	SPF1	P39986	1215 aa	Known RBP	7.05	□□□□□ -1.28
TFB4	YPR056W	VPS53	P47061	822 aa		7.05	□□□□□ -1.28
TFB4	YPR056W	FAA4	P47912	694 aa	Known RBP	7.05	□□□□□ -1.28
TFB4	YPR056W	YGR237C	P50089	785 aa		7.05	□□□□□ -1.28
TFB4	YPR056W	TYW3	P53177	273 aa		7.05	□□□□□ -1.28
TFB4	YPR056W	NTG2	Q08214	380 aa		7.05	□□□□□ -1.28
TFB4	YPR056W	LPX1	Q12405	387 aa	Known RBP	7.05	□□□□□ -1.28
TFB4	YPR056W	HEM13	P11353	328 aa	Known RBP	7.04	□□□□□ -1.28
TFB4	YPR056W	PGI1	P12709	554 aa	Known RBP	7.04	□□□□□ -1.28
TFB4	YPR056W	PRO1	P32264	428 aa		7.04	□□□□□ -1.28
TFB4	YPR056W	SEG2	P34250	1132 aa		7.04	□□□□□ -1.28
TFB4	YPR056W	RSP5	P39940	809 aa	Known RBP	7.04	□□□□□ -1.28
TFB4	YPR056W	PIC2	P40035	300 aa		7.04	□□□□□ -1.28
TFB4	YPR056W	UBX4	P54730	416 aa		7.04	□□□□□ -1.28
TFB4	YPR056W	TLG1	Q03322	224 aa		7.04	□□□□□ -1.28
TFB4	YPR056W	VPS5	Q92331	675 aa		7.04	□□□□□ -1.28
TFB4	YPR056W	SAM35	P14693	329 aa		7.03	□□□□□ -1.28
TFB4	YPR056W	HSC82	P15108	705 aa	Known RBP	7.03	□□□□□ -1.28
TFB4	YPR056W	MDL2	P33311	773 aa		7.03	□□□□□ -1.28
TFB4	YPR056W	QNS1	P38795	714 aa	Known RBP	7.03	□□□□□ -1.28
TFB4	YPR056W	SXM1	Q04175	944 aa	Known RBP	7.03	□□□□□ -1.28
TFB4	YPR056W	OPI10	Q08202	246 aa		7.03	□□□□□ -1.28
TFB4	YPR056W	RTP1	Q12751	981 aa		7.03	□□□□□ -1.28
TFB4	YPR056W	SRO9	P25567	434 aa	Known RBP	7.02	□□□□□ -1.29
TFB4	YPR056W	MSH2	P25847	964 aa		7.02	□□□□□ -1.29
TFB4	YPR056W	SSH4	P32343	579 aa		7.02	□□□□□ -1.29
TFB4	YPR056W	MRS6	P32864	603 aa	Known RBP	7.02	□□□□□ -1.29
TFB4	YPR056W	YHL012W	P38709	493 aa		7.02	□□□□□ -1.29
TFB4	YPR056W	PTC7	P38797	343 aa		7.02	□□□□□ -1.29
TFB4	YPR056W	GPP1	P41277	250 aa	Known RBP	7.02	□□□□□ -1.29
TFB4	YPR056W	MRPS18	P42847	217 aa		7.02	□□□□□ -1.29
TFB4	YPR056W	EST2	Q06163	884 aa		7.02	□□□□□ -1.29
TFB4	YPR056W	ATG13	Q06628	738 aa		7.02	□□□□□ -1.29
TFB4	YPR056W	PRE9	P23638	258 aa	Known RBP	7.01	□□□□□ -1.29
TFB4	YPR056W	ENT3	P47160	408 aa		7.01	□□□□□ -1.29
TFB4	YPR056W	HLJ1	P48353	224 aa		7.01	□□□□□ -1.29
TFB4	YPR056W	GRC3	Q07845	632 aa		7.01	□□□□□ -1.29
TFB4	YPR056W	NUP145	P49687	1317 aa		7.01	□□□□□ -1.29
TFB4	YPR056W	GFD2	P25370	566 aa	Known RBP	7	□□□□□ -1.29
TFB4	YPR056W	APL2	P36000	726 aa	Predicted RBP	7	□□□□□ -1.29
TFB4	YPR056W	PRP43	P53131	767 aa	Known RBP	7	□□□□□ -1.29
TFB4	YPR056W	SPC105	P53148	917 aa		7	□□□□□ -1.29
TFB4	YPR056W	YGR125W	P53273	1036 aa		7	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms