RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	GEM1	P39722	662 aa		2.45	□□□□□ -2.02
RLM1	YPL089C	VAC8	P39968	578 aa		2.45	□□□□□ -2.02
RLM1	YPL089C	MAD1	P40957	749 aa		2.45	□□□□□ -2.02
RLM1	YPL089C	VPS16	Q03308	798 aa		2.45	□□□□□ -2.02
RLM1	YPL089C	ATG13	Q06628	738 aa		2.45	□□□□□ -2.02
RLM1	YPL089C	RKM4	Q12504	494 aa		2.45	□□□□□ -2.02
RLM1	YPL089C	BAS1	P22035	811 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	MOT2	P34909	587 aa	Known RBP	2.44	□□□□□ -2.02
RLM1	YPL089C	RFC5	P38251	354 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	FAA4	P47912	694 aa	Known RBP	2.44	□□□□□ -2.02
RLM1	YPL089C	ALD6	P54115	500 aa	Known RBP	2.44	□□□□□ -2.02
RLM1	YPL089C	YLR225C	Q05948	407 aa	Known RBP	2.44	□□□□□ -2.02
RLM1	YPL089C	ACM1	Q08981	209 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	YPL066W	Q12194	479 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	SLA2	P33338	968 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	UGA2	P38067	497 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	SIP5	P40210	489 aa	Known RBP	2.44	□□□□□ -2.02
RLM1	YPL089C	ATF1	P40353	525 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	YGL176C	P46945	554 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	SUN4	P53616	420 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	GDE1	Q02979	1223 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	RSM24	Q03976	319 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	SPO20	Q04359	397 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	SGD1	Q06132	899 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	SPP382	Q06411	708 aa	Predicted RBP	2.44	□□□□□ -2.02
RLM1	YPL089C	SVS1	Q12254	260 aa		2.44	□□□□□ -2.02
RLM1	YPL089C	CYC1	P00044	109 aa	Predicted RBP	2.43	□□□□□ -2.02
RLM1	YPL089C	ACE2	P21192	770 aa		2.43	□□□□□ -2.02
RLM1	YPL089C	SRM1	P21827	482 aa		2.43	□□□□□ -2.02
RLM1	YPL089C	YKL107W	P34251	309 aa		2.43	□□□□□ -2.02
RLM1	YPL089C	LAM1	P38851	1228 aa		2.43	□□□□□ -2.02
RLM1	YPL089C	MEF2	P39677	819 aa		2.43	□□□□□ -2.02
RLM1	YPL089C	PLB2	Q03674	706 aa		2.43	□□□□□ -2.02
RLM1	YPL089C	YDR132C	Q03900	495 aa		2.43	□□□□□ -2.02
RLM1	YPL089C	RIB2	Q12362	591 aa	Known RBP	2.43	□□□□□ -2.02
RLM1	YPL089C	YOL098C	Q12496	1037 aa		2.43	□□□□□ -2.02
RLM1	YPL089C	BI4	P03879	638 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	THS1	P04801	734 aa	Known RBP	2.42	□□□□□ -2.02
RLM1	YPL089C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.42	□□□□□ -2.02	not detected
RLM1	YPL089C	RRT14	P40470	206 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	AIM21	P40563	679 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	MTC3	P53077	123 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.42	□□□□□ -2.02	not detected
RLM1	YPL089C	SIZ1	Q04195	904 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	FPR4	Q06205	392 aa	Predicted RBP	2.42	□□□□□ -2.02
RLM1	YPL089C	KIN2	P13186	1147 aa	Known RBP	2.42	□□□□□ -2.02
RLM1	YPL089C	CMP2	P14747	604 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	AGP1	P25376	633 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	ABD1	P32783	436 aa	Predicted RBP	2.42	□□□□□ -2.02
RLM1	YPL089C	SNF7	P39929	240 aa	Known RBP	2.42	□□□□□ -2.02
RLM1	YPL089C	CWC24	P53769	259 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	DUS4	Q06063	367 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	ESC2	Q06340	456 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	OPI10	Q08202	246 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	YOR352W	Q08816	343 aa		2.42	□□□□□ -2.02
RLM1	YPL089C	WRS1	Q12109	432 aa	Known RBP	2.42	□□□□□ -2.02
RLM1	YPL089C	GAL10	P04397	699 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	APL1	P27351	700 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	SBA1	P28707	216 aa	Known RBP	2.41	□□□□□ -2.02
RLM1	YPL089C	SRP40	P32583	406 aa	Predicted RBP	2.41	□□□□□ -2.02
RLM1	YPL089C	YKL151C	P36059	337 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	KRI1	P42846	591 aa	Known RBP	2.41	□□□□□ -2.02
RLM1	YPL089C	GCN5	Q03330	439 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	MSC2	Q03455	724 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	ROT1	Q03691	256 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	SHE9	Q04172	456 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	BRN1	P38170	754 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	SPT20	P50875	604 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	HFM1	P51979	1187 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	HRQ1	Q05549	1077 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	FAL1	Q12099	399 aa	Known RBP	2.41	□□□□□ -2.02
RLM1	YPL089C	SSF2	Q12153	453 aa	Predicted RBP	2.41	□□□□□ -2.02
RLM1	YPL089C	YLL058W	Q12198	575 aa		2.41	□□□□□ -2.02
RLM1	YPL089C	CDC6	P09119	513 aa		2.4	□□□□□ -2.03
RLM1	YPL089C	DOM34	P33309	386 aa		2.4	□□□□□ -2.03
RLM1	YPL089C	YKL069W	P36088	180 aa		2.4	□□□□□ -2.03
RLM1	YPL089C	VBA5	P36172	582 aa		2.4	□□□□□ -2.03
RLM1	YPL089C	MBP1	P39678	833 aa		2.4	□□□□□ -2.03
RLM1	YPL089C	IOC3	P43596	787 aa		2.4	□□□□□ -2.03
RLM1	YPL089C	RNH70	P53331	553 aa		2.4	□□□□□ -2.03
RLM1	YPL089C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.4	□□□□□ -2.03	not detected
RLM1	YPL089C	HCM1	P25364	564 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	SPC42	P36094	363 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	NMD2	P38798	1089 aa	Known RBP	2.39	□□□□□ -2.03
RLM1	YPL089C	PBP1	P53297	722 aa	Known RBP	2.39	□□□□□ -2.03
RLM1	YPL089C	IOC4	Q04213	475 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	MDM38	Q08179	573 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	PRI2	P20457	528 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	GRX1	P25373	110 aa	Known RBP	2.39	□□□□□ -2.03
RLM1	YPL089C	CDC20	P26309	610 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	YKL091C	P33324	310 aa	Known RBP	2.39	□□□□□ -2.03
RLM1	YPL089C	YJL049W	P47048	450 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	DOS2	P54858	310 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	LGE1	Q02796	332 aa	Known RBP	2.39	□□□□□ -2.03
RLM1	YPL089C	NSE3	Q05541	303 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	RXT3	Q07458	294 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	XYL2	Q07993	356 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	GPB1	Q08886	897 aa		2.39	□□□□□ -2.03
RLM1	YPL089C	CIT2	P08679	460 aa		2.38	□□□□□ -2.03
RLM1	YPL089C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.38	□□□□□ -2.03	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 163.6 ms