RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE4	YOR035C	CDC53	Q12018	815 aa	Known RBP	4.21	□□□□□ -1.74
SHE4	YOR035C	PPH3	P32345	308 aa		4.2	□□□□□ -1.74
SHE4	YOR035C	RFC5	P38251	354 aa		4.2	□□□□□ -1.74
SHE4	YOR035C	OCA5	P38738	679 aa		4.2	□□□□□ -1.74
SHE4	YOR035C	ALR2	P43553	858 aa		4.2	□□□□□ -1.74
SHE4	YOR035C	HRQ1	Q05549	1077 aa		4.2	□□□□□ -1.74
SHE4	YOR035C	DFG16	Q99234	619 aa		4.2	□□□□□ -1.74
SHE4	YOR035C	RPL8B	P29453	256 aa	Known RBP	4.2	□□□□□ -1.74
SHE4	YOR035C	AAR2	P32357	355 aa	Predicted RBP	4.2	□□□□□ -1.74
SHE4	YOR035C	ORC3	P54790	616 aa		4.2	□□□□□ -1.74
SHE4	YOR035C	SRP1	Q02821	542 aa	Known RBP	4.2	□□□□□ -1.74
SHE4	YOR035C	ARE1	P25628	610 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	SRP40	P32583	406 aa	Predicted RBP	4.19	□□□□□ -1.74
SHE4	YOR035C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SHE4	YOR035C	HUL5	P53119	910 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	ERP6	P53198	216 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	RSM24	Q03976	319 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	NSE3	Q05541	303 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	EAF1	Q06337	982 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	APL1	P27351	700 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	LRG1	P35688	1017 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	IOC3	P43596	787 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	ENV11	P53246	860 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	UBX5	Q06682	500 aa		4.19	□□□□□ -1.74
SHE4	YOR035C	KIN2	P13186	1147 aa	Known RBP	4.18	□□□□□ -1.74
SHE4	YOR035C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SHE4	YOR035C	YKL091C	P33324	310 aa	Known RBP	4.18	□□□□□ -1.74
SHE4	YOR035C	RRT14	P40470	206 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	PFD1	P46988	109 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	YGR125W	P53273	1036 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	ATG13	Q06628	738 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	BDF2	Q07442	638 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	YOR352W	Q08816	343 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	YOR131C	Q12486	218 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	HSP60	P19882	572 aa	Known RBP	4.18	□□□□□ -1.74
SHE4	YOR035C	ACE2	P21192	770 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	CDC12	P32468	407 aa	Known RBP	4.18	□□□□□ -1.74
SHE4	YOR035C	YKL151C	P36059	337 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	ABZ1	P37254	787 aa	Predicted RBP	4.18	□□□□□ -1.74
SHE4	YOR035C	CCC2	P38995	1004 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	ECL1	P48235	211 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	HFM1	P51979	1187 aa		4.18	□□□□□ -1.74
SHE4	YOR035C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SHE4	YOR035C	CIT1	P00890	479 aa		4.17	□□□□□ -1.74
SHE4	YOR035C	MDM38	Q08179	573 aa		4.17	□□□□□ -1.74
SHE4	YOR035C	CMP2	P14747	604 aa		4.17	□□□□□ -1.74
SHE4	YOR035C	YRO2	P38079	344 aa		4.17	□□□□□ -1.74
SHE4	YOR035C	UTP8	P53276	713 aa	Known RBP	4.17	□□□□□ -1.74
SHE4	YOR035C	OSW2	Q12202	724 aa		4.17	□□□□□ -1.74
SHE4	YOR035C	YDL177C	Q12257	170 aa		4.17	□□□□□ -1.74
SHE4	YOR035C	ADE8	P04161	214 aa		4.16	□□□□□ -1.74
SHE4	YOR035C	FLC1	Q08967	793 aa		4.16	□□□□□ -1.74
SHE4	YOR035C	YLL058W	Q12198	575 aa		4.16	□□□□□ -1.74
SHE4	YOR035C	CDC11	P32458	415 aa		4.16	□□□□□ -1.74
SHE4	YOR035C	SEG2	P34250	1132 aa		4.16	□□□□□ -1.74
SHE4	YOR035C	MTC3	P53077	123 aa		4.16	□□□□□ -1.74
SHE4	YOR035C	YTA7	P40340	1379 aa		4.15	□□□□□ -1.74
SHE4	YOR035C	CYC1	P00044	109 aa	Predicted RBP	4.15	□□□□□ -1.75
SHE4	YOR035C	YBR284W	P38150	797 aa		4.15	□□□□□ -1.75
SHE4	YOR035C	SNO2	P53823	222 aa		4.15	□□□□□ -1.75
SHE4	YOR035C	YDL124W	Q07551	312 aa	Known RBP	4.15	□□□□□ -1.75
SHE4	YOR035C	GAL11	P19659	1081 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	HBS1	P32769	611 aa	Known RBP	4.14	□□□□□ -1.75
SHE4	YOR035C	YHR020W	P38708	688 aa	Known RBP	4.14	□□□□□ -1.75
SHE4	YOR035C	GIC1	P38785	314 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	HUL4	P40985	892 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	SRT1	Q03175	343 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SHE4	YOR035C	RIB2	Q12362	591 aa	Known RBP	4.14	□□□□□ -1.75
SHE4	YOR035C	GAL10	P04397	699 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	GAS1	P22146	559 aa	Known RBP	4.14	□□□□□ -1.75
SHE4	YOR035C	FUN30	P31380	1131 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	SCT1	P32784	759 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	RSP5	P39940	809 aa	Known RBP	4.14	□□□□□ -1.75
SHE4	YOR035C	YER158C	P40095	573 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	MRPL22	P53881	309 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	XYL2	Q07993	356 aa		4.14	□□□□□ -1.75
SHE4	YOR035C	AVT1	P47082	602 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	GYP7	P48365	746 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	SGD1	Q06132	899 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	YPR196W	Q06595	470 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	YPR071W	Q12346	211 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	HBN1	Q96VH4	193 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	GGA2	P38817	585 aa	Known RBP	4.13	□□□□□ -1.75
SHE4	YOR035C	SIT1	P39980	628 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	SFB2	P53953	876 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SHE4	YOR035C	ROT1	Q03691	256 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	SIZ1	Q04195	904 aa		4.13	□□□□□ -1.75
SHE4	YOR035C	ENA1	P13587	1091 aa		4.12	□□□□□ -1.75
SHE4	YOR035C	NPP1	P25353	742 aa		4.12	□□□□□ -1.75
SHE4	YOR035C	YAP1801	P38856	637 aa		4.12	□□□□□ -1.75
SHE4	YOR035C	NPP2	P39997	493 aa		4.12	□□□□□ -1.75
SHE4	YOR035C	PRP43	P53131	767 aa	Known RBP	4.12	□□□□□ -1.75
SHE4	YOR035C	ENA2	Q01896	1091 aa		4.12	□□□□□ -1.75
SHE4	YOR035C	GLT1	Q12680	2145 aa	Known RBP	4.12	□□□□□ -1.75
SHE4	YOR035C	ENA5	Q12691	1091 aa		4.12	□□□□□ -1.75
SHE4	YOR035C	ERT1	P38140	529 aa		4.12	□□□□□ -1.75
SHE4	YOR035C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SHE4	YOR035C	MSC2	Q03455	724 aa		4.12	□□□□□ -1.75

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