RNA–Protein interactions for RNA: YOL071W

SDH5, Transcript of Protein required for flavinylation of Sdh1p, yeast

Gene SDH5, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH5	YOL071W	SMC5	Q08204	1093 aa		10.88	□□□□□ -0.67
SDH5	YOL071W	AHC1	Q12433	566 aa		10.88	□□□□□ -0.67
SDH5	YOL071W	SMC6	Q12749	1114 aa		10.88	□□□□□ -0.67
SDH5	YOL071W	SRD1	P09007	221 aa		10.87	□□□□□ -0.67
SDH5	YOL071W	IRE1	P32361	1115 aa		10.87	□□□□□ -0.67
SDH5	YOL071W	ORC6	P38826	435 aa		10.87	□□□□□ -0.67
SDH5	YOL071W	FYV10	P40492	516 aa		10.87	□□□□□ -0.67
SDH5	YOL071W	SVF1	Q05515	481 aa		10.87	□□□□□ -0.67
SDH5	YOL071W	HFI1	Q12060	488 aa		10.87	□□□□□ -0.67
SDH5	YOL071W	SWI6	P09959	803 aa		10.86	□□□□□ -0.67
SDH5	YOL071W	TCP1	P12612	559 aa	Known RBP	10.86	□□□□□ -0.67
SDH5	YOL071W	RSC8	P43609	557 aa	Known RBP	10.86	□□□□□ -0.67
SDH5	YOL071W	SPO74	P45819	413 aa		10.86	□□□□□ -0.67
SDH5	YOL071W	SKY1	Q03656	742 aa		10.86	□□□□□ -0.67
SDH5	YOL071W	VPS20	Q04272	221 aa		10.86	□□□□□ -0.67
SDH5	YOL071W	HIF1	Q12373	385 aa		10.86	□□□□□ -0.67
SDH5	YOL071W	SUP45	P12385	437 aa	Known RBP	10.85	□□□□□ -0.67
SDH5	YOL071W	TVP23	P38962	199 aa		10.85	□□□□□ -0.67
SDH5	YOL071W	JHD1	P40034	492 aa		10.85	□□□□□ -0.67
SDH5	YOL071W	NUP82	P40368	713 aa		10.85	□□□□□ -0.67
SDH5	YOL071W	DAK2	P43550	591 aa		10.85	□□□□□ -0.67
SDH5	YOL071W	JJJ3	P47138	172 aa		10.85	□□□□□ -0.67
SDH5	YOL071W	PIL1	P53252	339 aa	Known RBP	10.85	□□□□□ -0.67
SDH5	YOL071W	ROD1	Q02805	837 aa		10.85	□□□□□ -0.67
SDH5	YOL071W	COQ9	Q05779	260 aa		10.85	□□□□□ -0.67
SDH5	YOL071W	RLF2	Q12495	606 aa		10.85	□□□□□ -0.67
SDH5	YOL071W	PRX1	P34227	261 aa	Known RBP	10.84	□□□□□ -0.67
SDH5	YOL071W	THI6	P41835	540 aa		10.84	□□□□□ -0.67
SDH5	YOL071W	PEX14	P53112	341 aa		10.84	□□□□□ -0.67
SDH5	YOL071W	DIP5	P53388	608 aa		10.84	□□□□□ -0.67
SDH5	YOL071W	YLH47	Q06493	454 aa		10.84	□□□□□ -0.67
SDH5	YOL071W	PTC5	Q12511	572 aa		10.84	□□□□□ -0.67
SDH5	YOL071W	FOB1	O13329	566 aa		10.83	□□□□□ -0.68
SDH5	YOL071W	TIF1	P10081	395 aa	Known RBP	10.83	□□□□□ -0.68
SDH5	YOL071W	MAL33	P38157	468 aa		10.83	□□□□□ -0.68
SDH5	YOL071W	SDA1	P53313	767 aa	Known RBP	10.83	□□□□□ -0.68
SDH5	YOL071W	CBK1	P53894	756 aa		10.83	□□□□□ -0.68
SDH5	YOL071W	NPA3	P47122	385 aa		10.82	□□□□□ -0.68
SDH5	YOL071W	ENT3	P47160	408 aa		10.82	□□□□□ -0.68
SDH5	YOL071W	MCM6	P53091	1017 aa	Known RBP	10.82	□□□□□ -0.68
SDH5	YOL071W	PGA2	P53903	129 aa		10.82	□□□□□ -0.68
SDH5	YOL071W	YNL115C	P53925	644 aa		10.82	□□□□□ -0.68
SDH5	YOL071W	DED1	P06634	604 aa	Known RBP	10.81	□□□□□ -0.68
SDH5	YOL071W	HIP1	P06775	603 aa		10.81	□□□□□ -0.68
SDH5	YOL071W	YAP1801	P38856	637 aa		10.81	□□□□□ -0.68
SDH5	YOL071W	SNF7	P39929	240 aa	Known RBP	10.81	□□□□□ -0.68
SDH5	YOL071W	EIS1	Q05050	843 aa	Known RBP	10.81	□□□□□ -0.68
SDH5	YOL071W	YEL076C-A	P0CX16	216 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	YLR464W	P0CX17	216 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	POL3	P15436	1097 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	CDC48	P25694	835 aa	Known RBP	10.8	□□□□□ -0.68
SDH5	YOL071W	URA1	P28272	314 aa	Predicted RBP	10.8	□□□□□ -0.68
SDH5	YOL071W	DPH2	P32461	534 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	SIP3	P38717	1229 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	YEL076C	P39971	216 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	EAF5	P39995	279 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	CUE3	P53137	624 aa	Known RBP	10.8	□□□□□ -0.68
SDH5	YOL071W	SEC5	P89102	971 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	MMR1	Q06324	491 aa		10.8	□□□□□ -0.68
SDH5	YOL071W	TUF1	P02992	437 aa	Known RBP	10.79	□□□□□ -0.68
SDH5	YOL071W	FRS2	P15625	503 aa	Known RBP	10.79	□□□□□ -0.68
SDH5	YOL071W	RFT1	P38206	574 aa	Predicted RBP	10.79	□□□□□ -0.68
SDH5	YOL071W	RPN3	P40016	523 aa	Known RBP	10.79	□□□□□ -0.68
SDH5	YOL071W	CAF130	P53280	1122 aa	Predicted RBP	10.79	□□□□□ -0.68
SDH5	YOL071W	MUK1	Q02866	612 aa		10.79	□□□□□ -0.68
SDH5	YOL071W	CUR1	Q06469	252 aa		10.79	□□□□□ -0.68
SDH5	YOL071W	HXK1	P04806	485 aa	Known RBP	10.78	□□□□□ -0.68
SDH5	YOL071W	BIK1	P11709	440 aa		10.78	□□□□□ -0.68
SDH5	YOL071W	WHI2	P12611	486 aa		10.78	□□□□□ -0.68
SDH5	YOL071W	COT1	P32798	439 aa		10.78	□□□□□ -0.68
SDH5	YOL071W	VPS35	P34110	944 aa		10.78	□□□□□ -0.68
SDH5	YOL071W	ATG19	P35193	415 aa		10.78	□□□□□ -0.68
SDH5	YOL071W	DID4	P36108	232 aa		10.78	□□□□□ -0.68
SDH5	YOL071W	INP51	P40559	946 aa	Known RBP	10.78	□□□□□ -0.68
SDH5	YOL071W	NCS2	P53923	493 aa	Predicted RBP	10.78	□□□□□ -0.68
SDH5	YOL071W	HIS4	P00815	799 aa	Known RBP	10.77	□□□□□ -0.69
SDH5	YOL071W	RPL22A	P05749	121 aa	Known RBP	10.77	□□□□□ -0.69
SDH5	YOL071W	MSD1	P15179	658 aa	Known RBP	10.77	□□□□□ -0.69
SDH5	YOL071W	RGP1	P16664	663 aa		10.77	□□□□□ -0.69
SDH5	YOL071W	RPC53	P25441	422 aa		10.77	□□□□□ -0.69
SDH5	YOL071W	BMH1	P29311	267 aa	Known RBP	10.77	□□□□□ -0.69
SDH5	YOL071W	ACF4	P47129	309 aa		10.77	□□□□□ -0.69
SDH5	YOL071W	UBA2	P52488	636 aa		10.77	□□□□□ -0.69
SDH5	YOL071W	YLR422W	Q06409	1932 aa		10.76	□□□□□ -0.69
SDH5	YOL071W	ADE2	P21264	571 aa	Known RBP	10.76	□□□□□ -0.69
SDH5	YOL071W	ISY1	P21374	235 aa	Predicted RBP	10.76	□□□□□ -0.69
SDH5	YOL071W	RDS1	P25611	832 aa		10.76	□□□□□ -0.69
SDH5	YOL071W	TMT1	P32643	299 aa		10.76	□□□□□ -0.69
SDH5	YOL071W	VTC2	P43585	828 aa		10.76	□□□□□ -0.69
SDH5	YOL071W	GCV2	P49095	1034 aa		10.76	□□□□□ -0.69
SDH5	YOL071W	ADY4	Q05955	493 aa		10.76	□□□□□ -0.69
SDH5	YOL071W	YPR117W	Q06116	2489 aa		10.75	□□□□□ -0.69
SDH5	YOL071W	PCT1	P13259	424 aa		10.75	□□□□□ -0.69
SDH5	YOL071W	IDI1	P15496	288 aa		10.75	□□□□□ -0.69
SDH5	YOL071W	PFK1	P16861	987 aa	Known RBP	10.75	□□□□□ -0.69
SDH5	YOL071W	CAD1	P24813	409 aa	Known RBP	10.75	□□□□□ -0.69
SDH5	YOL071W	BIO2	P32451	375 aa		10.75	□□□□□ -0.69
SDH5	YOL071W	DRE2	P36152	348 aa		10.75	□□□□□ -0.69
SDH5	YOL071W	SLX1	P38324	304 aa		10.75	□□□□□ -0.69
SDH5	YOL071W	BUD16	P39988	312 aa		10.75	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms