RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS27	YNR006W	UTP22	P53254	1237 aa	Predicted RBP	4.66	□□□□□ -1.66
VPS27	YNR006W	MET14	Q02196	202 aa		4.66	□□□□□ -1.66
VPS27	YNR006W	GIS4	Q04233	774 aa		4.66	□□□□□ -1.66
VPS27	YNR006W	RGA2	Q06407	1009 aa		4.66	□□□□□ -1.66
VPS27	YNR006W	TFC4	P33339	1025 aa		4.65	□□□□□ -1.66
VPS27	YNR006W	BAP2	P38084	609 aa		4.65	□□□□□ -1.66
VPS27	YNR006W	CCC2	P38995	1004 aa		4.65	□□□□□ -1.66
VPS27	YNR006W	HOS4	P40480	1083 aa		4.65	□□□□□ -1.66
VPS27	YNR006W	SLS1	P42900	643 aa		4.65	□□□□□ -1.66
VPS27	YNR006W	TIF35	Q04067	274 aa	Known RBP	4.65	□□□□□ -1.66
VPS27	YNR006W	GAL1	P04385	528 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	TRZ1	P36159	838 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS27	YNR006W	PAN5	P38787	379 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	JJJ3	P47138	172 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	ENT3	P47160	408 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	MTQ2	Q03920	221 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS27	YNR006W	TRE2	Q08693	809 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	VBA3	P25594	458 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	EXO84	P38261	753 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	DSS1	P39112	969 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	TED1	P40533	473 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	UTP5	Q04177	643 aa	Known RBP	4.64	□□□□□ -1.67
VPS27	YNR006W	SLP1	Q12232	587 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	RRI2	Q12348	645 aa		4.64	□□□□□ -1.67
VPS27	YNR006W	HSP78	P33416	811 aa		4.63	□□□□□ -1.67
VPS27	YNR006W	PGM2	P37012	569 aa	Known RBP	4.63	□□□□□ -1.67
VPS27	YNR006W	RRP8	P38961	392 aa	Known RBP	4.63	□□□□□ -1.67
VPS27	YNR006W	SPO71	Q03868	1245 aa		4.63	□□□□□ -1.67
VPS27	YNR006W	HFD1	Q04458	532 aa		4.63	□□□□□ -1.67
VPS27	YNR006W	ERP4	Q12450	207 aa		4.63	□□□□□ -1.67
VPS27	YNR006W	RKM4	Q12504	494 aa		4.63	□□□□□ -1.67
VPS27	YNR006W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	RIP-Chip
VPS27	YNR006W	TOM70	P07213	617 aa	Known RBP	4.62	□□□□□ -1.67
VPS27	YNR006W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
VPS27	YNR006W	ARL1	P38116	183 aa	Known RBP	4.62	□□□□□ -1.67
VPS27	YNR006W	ALG14	P38242	237 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	YGL176C	P46945	554 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	GCV1	P48015	400 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	MEC3	Q02574	474 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	HPF1	Q05164	967 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	EST2	Q06163	884 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	TY4B-P	A0A0B7P3V8	1104 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	APA1	P16550	321 aa	Known RBP	4.62	□□□□□ -1.67
VPS27	YNR006W	UBP6	P43593	499 aa	Known RBP	4.62	□□□□□ -1.67
VPS27	YNR006W	MET13	P53128	600 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	MDM1	Q01846	1127 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	TY4A-H	Q6Q5P6	413 aa		4.62	□□□□□ -1.67
VPS27	YNR006W	CDC9	P04819	755 aa		4.61	□□□□□ -1.67
VPS27	YNR006W	DED1	P06634	604 aa	Known RBP	4.61	□□□□□ -1.67
VPS27	YNR006W	TOA1	P32773	286 aa		4.61	□□□□□ -1.67
VPS27	YNR006W	YKL107W	P34251	309 aa		4.61	□□□□□ -1.67
VPS27	YNR006W	ADD66	P36040	267 aa		4.61	□□□□□ -1.67
VPS27	YNR006W	YBR284W	P38150	797 aa		4.61	□□□□□ -1.67
VPS27	YNR006W	SIP5	P40210	489 aa	Known RBP	4.61	□□□□□ -1.67
VPS27	YNR006W	RAT1	Q02792	1006 aa	Known RBP	4.61	□□□□□ -1.67
VPS27	YNR006W	AOS1	Q06624	347 aa		4.61	□□□□□ -1.67
VPS27	YNR006W	RRP6	Q12149	733 aa	Known RBP	4.61	□□□□□ -1.67
VPS27	YNR006W	DPH6	Q12429	685 aa		4.61	□□□□□ -1.67
VPS27	YNR006W	MSD1	P15179	658 aa	Known RBP	4.6	□□□□□ -1.67
VPS27	YNR006W	ERS1	P17261	260 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	RAD53	P22216	821 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	PCL2	P25693	308 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	PTP2	P29461	750 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	MRS6	P32864	603 aa	Known RBP	4.6	□□□□□ -1.67
VPS27	YNR006W	IES1	P43579	692 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	RSC8	P43609	557 aa	Known RBP	4.6	□□□□□ -1.67
VPS27	YNR006W	YJR096W	P47137	282 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	ELG1	Q12050	791 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	SRD1	P09007	221 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	SYP1	P25623	870 aa	Known RBP	4.6	□□□□□ -1.67
VPS27	YNR006W	SSH4	P32343	579 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	AFG2	P32794	780 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	REI1	P38344	393 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS27	YNR006W	NIT2	P47016	307 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	NHA1	Q99271	985 aa		4.6	□□□□□ -1.67
VPS27	YNR006W	HSC82	P15108	705 aa	Known RBP	4.59	□□□□□ -1.67
VPS27	YNR006W	SAC7	P17121	654 aa		4.59	□□□□□ -1.67
VPS27	YNR006W	DBP5	P20449	482 aa	Known RBP	4.59	□□□□□ -1.67
VPS27	YNR006W	GSY1	P23337	708 aa		4.59	□□□□□ -1.67
VPS27	YNR006W	NIC96	P34077	839 aa		4.59	□□□□□ -1.67
VPS27	YNR006W	MNN4	P36044	1178 aa		4.59	□□□□□ -1.67
VPS27	YNR006W	PET10	P36139	283 aa		4.59	□□□□□ -1.67
VPS27	YNR006W	YAP1801	P38856	637 aa		4.59	□□□□□ -1.67
VPS27	YNR006W	SPO74	P45819	413 aa		4.59	□□□□□ -1.67
VPS27	YNR006W	PBP1	P53297	722 aa	Known RBP	4.59	□□□□□ -1.67
VPS27	YNR006W	RKM2	Q03942	479 aa		4.59	□□□□□ -1.67
VPS27	YNR006W	RAD18	P10862	487 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	DOM34	P33309	386 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	KTR4	P38131	464 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	SAH1	P39954	449 aa	Known RBP	4.58	□□□□□ -1.68
VPS27	YNR006W	DUG1	P43616	481 aa	Known RBP	4.58	□□□□□ -1.68
VPS27	YNR006W	YML131W	Q03102	365 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	ALG6	Q12001	544 aa	Known RBP	4.58	□□□□□ -1.68
VPS27	YNR006W	YOL087C	Q99247	1116 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	SFL1	P20134	766 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	KCC4	P25389	1037 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	YHL041W	P38730	149 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	GPP2	P40106	250 aa	Known RBP	4.58	□□□□□ -1.68
VPS27	YNR006W	MPH1	P40562	993 aa		4.58	□□□□□ -1.68
VPS27	YNR006W	CNN1	P43618	361 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms