RNA–Protein interactions for RNA: YMR293C

HER2, Transcript of Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex, yeastyeast

Gene HER2, Length 1,395 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER2YMR293C RTA1P53047 317 aa7.02□□□□□ -1.29
HER2YMR293C CDC12P32468 407 aaKnown RBP7.01□□□□□ -1.29
HER2YMR293C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29 RIP-Chip
HER2YMR293C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
HER2YMR293C HBN1Q96VH4 193 aa7.01□□□□□ -1.29
HER2YMR293C CHS2P14180 963 aa7□□□□□ -1.29
HER2YMR293C PPG1P32838 368 aa7□□□□□ -1.29
HER2YMR293C BET3P36149 193 aa7□□□□□ -1.29
HER2YMR293C HUL4P40985 892 aa7□□□□□ -1.29
HER2YMR293C CCT8P47079 568 aaKnown RBP7□□□□□ -1.29
HER2YMR293C HRQ1Q05549 1077 aa7□□□□□ -1.29
HER2YMR293C DUS3Q06053 668 aaKnown RBP7□□□□□ -1.29
HER2YMR293C YDR306CQ06640 478 aa7□□□□□ -1.29
HER2YMR293C ERR1P0CX10 437 aa6.99□□□□□ -1.29
HER2YMR293C ERR2P0CX11 437 aa6.99□□□□□ -1.29
HER2YMR293C PRO1P32264 428 aa6.99□□□□□ -1.29
HER2YMR293C KAE1P36132 386 aa6.99□□□□□ -1.29
HER2YMR293C UGA2P38067 497 aa6.99□□□□□ -1.29
HER2YMR293C ATG13Q06628 738 aa6.99□□□□□ -1.29
HER2YMR293C YLR125WQ12138 136 aa6.99□□□□□ -1.29
HER2YMR293C THS1P04801 734 aaKnown RBP6.98□□□□□ -1.29
HER2YMR293C PHO8P11491 566 aa6.98□□□□□ -1.29
HER2YMR293C SCT1P32784 759 aa6.98□□□□□ -1.29
HER2YMR293C SPC42P36094 363 aa6.98□□□□□ -1.29
HER2YMR293C BRN1P38170 754 aa6.98□□□□□ -1.29
HER2YMR293C CCZ1P38273 704 aa6.98□□□□□ -1.29
HER2YMR293C CCC2P38995 1004 aa6.98□□□□□ -1.29
HER2YMR293C MTC3P53077 123 aa6.98□□□□□ -1.29
HER2YMR293C TPO2P53283 614 aa6.98□□□□□ -1.29
HER2YMR293C RSC58Q07979 502 aa6.98□□□□□ -1.29
HER2YMR293C TRE1Q08919 783 aa6.98□□□□□ -1.29
HER2YMR293C YLL058WQ12198 575 aa6.98□□□□□ -1.29
HER2YMR293C AAR2P32357 355 aaPredicted RBP6.97□□□□□ -1.29
HER2YMR293C CDC11P32458 415 aa6.97□□□□□ -1.29
HER2YMR293C SRP1Q02821 542 aaKnown RBP6.97□□□□□ -1.29
HER2YMR293C BUL2Q03758 920 aaKnown RBP6.97□□□□□ -1.29
HER2YMR293C YDL124WQ07551 312 aaKnown RBP6.97□□□□□ -1.29
HER2YMR293C BI4P03879 638 aa6.96□□□□□ -1.29
HER2YMR293C AFR1P33304 620 aa6.96□□□□□ -1.29
HER2YMR293C TOP3P13099 656 aa6.95□□□□□ -1.3
HER2YMR293C PET10P36139 283 aa6.95□□□□□ -1.3
HER2YMR293C GCD1P09032 578 aaPredicted RBP6.95□□□□□ -1.3
HER2YMR293C YBR284WP38150 797 aa6.95□□□□□ -1.3
HER2YMR293C SAH1P39954 449 aaKnown RBP6.95□□□□□ -1.3
HER2YMR293C MDM38Q08179 573 aa6.95□□□□□ -1.3
HER2YMR293C NBA1Q08229 501 aaKnown RBP6.95□□□□□ -1.3
HER2YMR293C ADE8P04161 214 aa6.94□□□□□ -1.3
HER2YMR293C MET6P05694 767 aaKnown RBP6.94□□□□□ -1.3
HER2YMR293C MSD1P15179 658 aaKnown RBP6.94□□□□□ -1.3
HER2YMR293C PPH3P32345 308 aa6.94□□□□□ -1.3
HER2YMR293C RRT14P40470 206 aa6.94□□□□□ -1.3
HER2YMR293C UBP6P43593 499 aaKnown RBP6.94□□□□□ -1.3
HER2YMR293C YGR130CP53278 816 aa6.94□□□□□ -1.3
HER2YMR293C NSI1Q12457 570 aa6.94□□□□□ -1.3
HER2YMR293C ACE2P21192 770 aa6.93□□□□□ -1.3
HER2YMR293C NPP1P25353 742 aa6.93□□□□□ -1.3
HER2YMR293C MAL11P53048 616 aa6.93□□□□□ -1.3
HER2YMR293C SSY1Q03770 852 aa6.93□□□□□ -1.3
HER2YMR293C LCD1Q04377 747 aa6.93□□□□□ -1.3
HER2YMR293C TRP3P00937 484 aa6.92□□□□□ -1.3
HER2YMR293C MSH2P25847 964 aa6.92□□□□□ -1.3
HER2YMR293C THI4P32318 326 aa6.92□□□□□ -1.3
HER2YMR293C DOM34P33309 386 aa6.92□□□□□ -1.3
HER2YMR293C YKR078WP36158 585 aaKnown RBP6.92□□□□□ -1.3
HER2YMR293C YRO2P38079 344 aa6.92□□□□□ -1.3
HER2YMR293C GIC1P38785 314 aa6.92□□□□□ -1.3
HER2YMR293C PTC7P38797 343 aa6.92□□□□□ -1.3
HER2YMR293C GDH3P39708 457 aa6.92□□□□□ -1.3
HER2YMR293C NPP2P39997 493 aa6.92□□□□□ -1.3
HER2YMR293C GTS1P40956 396 aa6.92□□□□□ -1.3
HER2YMR293C GYP7P48365 746 aa6.92□□□□□ -1.3
HER2YMR293C RSB1Q08417 382 aa6.92□□□□□ -1.3
HER2YMR293C YPR071WQ12346 211 aa6.92□□□□□ -1.3
HER2YMR293C CYC7P00045 113 aa6.91□□□□□ -1.3
HER2YMR293C ABZ1P37254 787 aaPredicted RBP6.91□□□□□ -1.3
HER2YMR293C FPR3P38911 411 aaKnown RBP6.91□□□□□ -1.3
HER2YMR293C POB3Q04636 552 aaKnown RBP6.91□□□□□ -1.3
HER2YMR293C ADP1P25371 1049 aa6.9□□□□□ -1.31
HER2YMR293C YBR238CP38330 731 aaKnown RBP6.9□□□□□ -1.31
HER2YMR293C TSL1P38427 1098 aaKnown RBP6.9□□□□□ -1.31
HER2YMR293C TOK1P40310 691 aa6.9□□□□□ -1.31
HER2YMR293C HFM1P51979 1187 aa6.9□□□□□ -1.31
HER2YMR293C YKE2P52553 114 aa6.9□□□□□ -1.31
HER2YMR293C ORC3P54790 616 aa6.9□□□□□ -1.31
HER2YMR293C SRT1Q03175 343 aa6.9□□□□□ -1.31
HER2YMR293C SVS1Q12254 260 aa6.9□□□□□ -1.31
HER2YMR293C LPX1Q12405 387 aaKnown RBP6.9□□□□□ -1.31
HER2YMR293C TOM70P07213 617 aaKnown RBP6.89□□□□□ -1.31
HER2YMR293C FUN30P31380 1131 aa6.89□□□□□ -1.31
HER2YMR293C YKR073CP36153 106 aa6.89□□□□□ -1.31
HER2YMR293C ERT1P38140 529 aa6.89□□□□□ -1.31
HER2YMR293C SEC26P41810 973 aaKnown RBP6.89□□□□□ -1.31
HER2YMR293C MED7Q08278 222 aa6.89□□□□□ -1.31
HER2YMR293C AIM26P32858 118 aa6.88□□□□□ -1.31
HER2YMR293C MNN1P39106 762 aa6.88□□□□□ -1.31
HER2YMR293C CCM1P48237 864 aaPredicted RBP6.88□□□□□ -1.31
HER2YMR293C HSV2P50079 448 aaPredicted RBP6.88□□□□□ -1.31
HER2YMR293C SPS1P08458 490 aa6.87□□□□□ -1.31
HER2YMR293C LSB3P43603 459 aaKnown RBP6.87□□□□□ -1.31
HER2YMR293C SDH1Q00711 640 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms