RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W RPN10P38886 268 aaKnown RBP5.77□□□□□ -1.49
SPG4YMR107W STM1P39015 273 aaKnown RBP5.77□□□□□ -1.49
SPG4YMR107W VID27P40157 782 aa5.77□□□□□ -1.49
SPG4YMR107W HOS4P40480 1083 aa5.77□□□□□ -1.49
SPG4YMR107W TDA10P42938 290 aa5.77□□□□□ -1.49
SPG4YMR107W TAD1P53065 400 aa5.77□□□□□ -1.49
SPG4YMR107W BTN2P53286 410 aa5.77□□□□□ -1.49
SPG4YMR107W KAR5Q04746 504 aa5.77□□□□□ -1.49
SPG4YMR107W SOV1Q04748 898 aa5.77□□□□□ -1.49
SPG4YMR107W RSA3Q05942 220 aaKnown RBP5.77□□□□□ -1.49
SPG4YMR107W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
SPG4YMR107W YOL075CQ08234 1294 aa5.77□□□□□ -1.49
SPG4YMR107W MET7Q08645 548 aa5.77□□□□□ -1.49
SPG4YMR107W YPR204WQ08995 1032 aa5.77□□□□□ -1.49
SPG4YMR107W TY1A-DR4O74302 440 aa5.76□□□□□ -1.49
SPG4YMR107W CDC8P00572 216 aa5.76□□□□□ -1.49
SPG4YMR107W TOM70P07213 617 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W TY1A-HP0C2I4 478 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W TY1A-AP0CX57 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-PR1P0CX58 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-ORP0CX59 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-PR2P0CX60 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-DR5P0CX65 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-ER2P0CX66 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-GR3P0CX67 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-LR1P0CX68 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-MR2P0CX69 440 aa5.76□□□□□ -1.49
SPG4YMR107W ERG11P10614 530 aa5.76□□□□□ -1.49
SPG4YMR107W PDC6P26263 563 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W MVD1P32377 396 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W HIR1P32479 840 aa5.76□□□□□ -1.49
SPG4YMR107W GCD11P32481 527 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W KAR9P32526 644 aa5.76□□□□□ -1.49
SPG4YMR107W LOS1P33418 1100 aaPredicted RBP5.76□□□□□ -1.49
SPG4YMR107W RRP14P36080 434 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W LIN1P38852 340 aaPredicted RBP5.76□□□□□ -1.49
SPG4YMR107W SUM1P46676 1062 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-JR2P47099 440 aa5.76□□□□□ -1.49
SPG4YMR107W SNU71P53207 620 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W ATF2P53296 535 aa5.76□□□□□ -1.49
SPG4YMR107W UME1Q03010 460 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-DR1Q03856 440 aa5.76□□□□□ -1.49
SPG4YMR107W SAS4Q04003 481 aa5.76□□□□□ -1.49
SPG4YMR107W YKU80Q04437 629 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-ML1Q04706 440 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W TDA5Q06417 326 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W MLH2Q07980 695 aa5.76□□□□□ -1.49
SPG4YMR107W GPN2Q08726 347 aaPredicted RBP5.76□□□□□ -1.49
SPG4YMR107W CWC2Q12046 339 aaPredicted RBP5.76□□□□□ -1.49
SPG4YMR107W TY1A-BRQ12217 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-NL2Q12470 440 aa5.76□□□□□ -1.49
SPG4YMR107W TY1A-GR2Q12485 440 aa5.76□□□□□ -1.49
SPG4YMR107W FAS2P19097 1887 aaKnown RBP5.76□□□□□ -1.49
SPG4YMR107W SEC18P18759 758 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W PRP9P19736 530 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W BUD2P33314 1104 aa5.75□□□□□ -1.49
SPG4YMR107W SEC66P33754 206 aa5.75□□□□□ -1.49
SPG4YMR107W TFC3P34111 1160 aa5.75□□□□□ -1.49
SPG4YMR107W LHS1P36016 881 aa5.75□□□□□ -1.49
SPG4YMR107W HEK2P38199 381 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SPG4YMR107W YBR032WP38223 100 aa5.75□□□□□ -1.49
SPG4YMR107W FZO1P38297 855 aa5.75□□□□□ -1.49
SPG4YMR107W ERG7P38604 731 aa5.75□□□□□ -1.49
SPG4YMR107W OSH3P38713 996 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W AKR1P39010 764 aa5.75□□□□□ -1.49
SPG4YMR107W POL31P46957 487 aa5.75□□□□□ -1.49
SPG4YMR107W YJR039WP47107 1121 aa5.75□□□□□ -1.49
SPG4YMR107W TEL2P53038 688 aa5.75□□□□□ -1.49
SPG4YMR107W SHE10P53075 577 aa5.75□□□□□ -1.49
SPG4YMR107W FAR11P53917 953 aa5.75□□□□□ -1.49
SPG4YMR107W HDA1P53973 706 aa5.75□□□□□ -1.49
SPG4YMR107W ADE16P54113 591 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W DIG1Q03063 452 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W URH1Q04179 340 aa5.75□□□□□ -1.49
SPG4YMR107W HCR1Q05775 265 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W YSH1Q06224 779 aaPredicted RBP5.75□□□□□ -1.49
SPG4YMR107W SLK19Q08581 821 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W TAF10Q12030 206 aa5.75□□□□□ -1.49
SPG4YMR107W RRP6Q12149 733 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W GET3Q12154 354 aaKnown RBP5.75□□□□□ -1.49
SPG4YMR107W CLF1Q12309 687 aaPredicted RBP5.75□□□□□ -1.49
SPG4YMR107W NCA2Q12374 616 aa5.75□□□□□ -1.49
SPG4YMR107W RGP1P16664 663 aa5.74□□□□□ -1.49
SPG4YMR107W SEC2P17065 759 aa5.74□□□□□ -1.49
SPG4YMR107W PHO87P25360 923 aa5.74□□□□□ -1.49
SPG4YMR107W CDC48P25694 835 aaKnown RBP5.74□□□□□ -1.49
SPG4YMR107W IMP2'P32351 346 aa5.74□□□□□ -1.49
SPG4YMR107W NUF2P33895 451 aa5.74□□□□□ -1.49
SPG4YMR107W AMN1P38285 549 aaPredicted RBP5.74□□□□□ -1.49
SPG4YMR107W SCS2P40075 244 aaKnown RBP5.74□□□□□ -1.49
SPG4YMR107W SMX2P40204 77 aaKnown RBP5.74□□□□□ -1.49
SPG4YMR107W PTK2P47116 818 aaKnown RBP5.74□□□□□ -1.49
SPG4YMR107W VID30P53076 958 aa5.74□□□□□ -1.49
SPG4YMR107W HUL5P53119 910 aa5.74□□□□□ -1.49
SPG4YMR107W MDR1P53258 950 aa5.74□□□□□ -1.49
SPG4YMR107W ZPR1P53303 486 aaKnown RBP5.74□□□□□ -1.49
SPG4YMR107W NIS1P53939 407 aa5.74□□□□□ -1.49
SPG4YMR107W PPM1Q04081 328 aa5.74□□□□□ -1.49
SPG4YMR107W TRS120Q04183 1289 aa5.74□□□□□ -1.49
SPG4YMR107W MMR1Q06324 491 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms