RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI6	YLR182W	SEG2	P34250	1132 aa		2.68	□□□□□ -1.98
SWI6	YLR182W	PIK1	P39104	1066 aa		2.68	□□□□□ -1.98
SWI6	YLR182W	HFM1	P51979	1187 aa		2.68	□□□□□ -1.98
SWI6	YLR182W	TNA1	P53322	534 aa		2.68	□□□□□ -1.98
SWI6	YLR182W	NSE3	Q05541	303 aa		2.68	□□□□□ -1.98
SWI6	YLR182W	SPP382	Q06411	708 aa	Predicted RBP	2.68	□□□□□ -1.98
SWI6	YLR182W	YOL098C	Q12496	1037 aa		2.68	□□□□□ -1.98
SWI6	YLR182W	LIP5	P32875	414 aa		2.67	□□□□□ -1.98
SWI6	YLR182W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
SWI6	YLR182W	FLC1	Q08967	793 aa		2.67	□□□□□ -1.98
SWI6	YLR182W	CDC12	P32468	407 aa	Known RBP	2.67	□□□□□ -1.98
SWI6	YLR182W	GIC1	P38785	314 aa		2.67	□□□□□ -1.98
SWI6	YLR182W	GEM1	P39722	662 aa		2.67	□□□□□ -1.98
SWI6	YLR182W	RTA1	P53047	317 aa		2.67	□□□□□ -1.98
SWI6	YLR182W	TAF8	Q03750	510 aa		2.67	□□□□□ -1.98
SWI6	YLR182W	MRP8	P35719	219 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	POL12	P38121	705 aa	Predicted RBP	2.66	□□□□□ -1.98
SWI6	YLR182W	YBR284W	P38150	797 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	PBY1	P38254	753 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	SFB2	P53953	876 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	ATG13	Q06628	738 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	MDM38	Q08179	573 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	SVS1	Q12254	260 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	HBN1	Q96VH4	193 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	DFG16	Q99234	619 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	ERR1	P0CX10	437 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	ERR2	P0CX11	437 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	TSL1	P38427	1098 aa	Known RBP	2.66	□□□□□ -1.98
SWI6	YLR182W	RSP5	P39940	809 aa	Known RBP	2.66	□□□□□ -1.98
SWI6	YLR182W	TIM54	P47045	478 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	MAL11	P53048	616 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	UTP8	P53276	713 aa	Known RBP	2.66	□□□□□ -1.98
SWI6	YLR182W	EAF1	Q06337	982 aa		2.66	□□□□□ -1.98
SWI6	YLR182W	COQ4	O13525	335 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	CYC1	P00044	109 aa	Predicted RBP	2.65	□□□□□ -1.99
SWI6	YLR182W	CAN1	P04817	590 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	SPS1	P08458	490 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	CIT2	P08679	460 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	CDC6	P09119	513 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	RNQ1	P25367	405 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	SEC26	P41810	973 aa	Known RBP	2.65	□□□□□ -1.99
SWI6	YLR182W	ALR2	P43553	858 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	NAN1	Q02931	896 aa	Known RBP	2.65	□□□□□ -1.99
SWI6	YLR182W	SRT1	Q03175	343 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	RPN4	Q03465	531 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	DUS3	Q06053	668 aa	Known RBP	2.65	□□□□□ -1.99
SWI6	YLR182W	CDA2	Q06703	312 aa		2.65	□□□□□ -1.99
SWI6	YLR182W	MAC1	P35192	417 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
SWI6	YLR182W	CCZ1	P38273	704 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	SIT1	P39980	628 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	NNF1	P47149	201 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	YGR125W	P53273	1036 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	RIP-Chip
SWI6	YLR182W	MSC2	Q03455	724 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	YDR306C	Q06640	478 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	CDC53	Q12018	815 aa	Known RBP	2.64	□□□□□ -1.99
SWI6	YLR182W	TIM23	P32897	222 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	THI80	P35202	319 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	RFC5	P38251	354 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	TY4A-J	P47023	414 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	GCV2	P49095	1034 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	YKE2	P52553	114 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
SWI6	YLR182W	YPR071W	Q12346	211 aa		2.64	□□□□□ -1.99
SWI6	YLR182W	MSD1	P15179	658 aa	Known RBP	2.63	□□□□□ -1.99
SWI6	YLR182W	YAP1801	P38856	637 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	MRPL22	P53881	309 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	DUS4	Q06063	367 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	YTA7	P40340	1379 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	CIT1	P00890	479 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	GAL10	P04397	699 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	ECM21	P38167	1117 aa	Known RBP	2.63	□□□□□ -1.99
SWI6	YLR182W	TOK1	P40310	691 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	YJL049W	P47048	450 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	ROT1	Q03691	256 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	SIZ1	Q04195	904 aa		2.63	□□□□□ -1.99
SWI6	YLR182W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
SWI6	YLR182W	SAH1	P39954	449 aa	Known RBP	2.62	□□□□□ -1.99
SWI6	YLR182W	NBA1	Q08229	501 aa	Known RBP	2.62	□□□□□ -1.99
SWI6	YLR182W	RSB1	Q08417	382 aa		2.62	□□□□□ -1.99
SWI6	YLR182W	CMP2	P14747	604 aa		2.62	□□□□□ -1.99
SWI6	YLR182W	HSP60	P19882	572 aa	Known RBP	2.62	□□□□□ -1.99
SWI6	YLR182W	ARE1	P25628	610 aa		2.62	□□□□□ -1.99
SWI6	YLR182W	SRP40	P32583	406 aa	Predicted RBP	2.62	□□□□□ -1.99
SWI6	YLR182W	RRT14	P40470	206 aa		2.62	□□□□□ -1.99
SWI6	YLR182W	AVT1	P47082	602 aa		2.62	□□□□□ -1.99
SWI6	YLR182W	YDR132C	Q03900	495 aa		2.62	□□□□□ -1.99
SWI6	YLR182W	YLL058W	Q12198	575 aa		2.62	□□□□□ -1.99
SWI6	YLR182W	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
SWI6	YLR182W	APL1	P27351	700 aa		2.61	□□□□□ -1.99
SWI6	YLR182W	YKL091C	P33324	310 aa	Known RBP	2.61	□□□□□ -1.99
SWI6	YLR182W	CCC2	P38995	1004 aa		2.61	□□□□□ -1.99
SWI6	YLR182W	GYP8	P43570	497 aa		2.61	□□□□□ -1.99
SWI6	YLR182W	ERP6	P53198	216 aa		2.61	□□□□□ -1.99
SWI6	YLR182W	CDA1	Q06702	301 aa		2.61	□□□□□ -1.99
SWI6	YLR182W	SPO75	Q07798	868 aa		2.61	□□□□□ -1.99
SWI6	YLR182W	GAS1	P22146	559 aa	Known RBP	2.61	□□□□□ -1.99
SWI6	YLR182W	AAR2	P32357	355 aa	Predicted RBP	2.61	□□□□□ -1.99
SWI6	YLR182W	PET10	P36139	283 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 99.2 ms