RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C ATG1P53104 897 aa10.99□□□□□ -0.65
POM34YLR018C LSC2P53312 427 aa10.99□□□□□ -0.65
POM34YLR018C WAR1Q03631 944 aa10.99□□□□□ -0.65
POM34YLR018C HCR1Q05775 265 aaKnown RBP10.99□□□□□ -0.65
POM34YLR018C YLR225CQ05948 407 aaKnown RBP10.99□□□□□ -0.65
POM34YLR018C YPL216WQ08964 1102 aa10.99□□□□□ -0.65
POM34YLR018C PFK1P16861 987 aaKnown RBP10.98□□□□□ -0.65
POM34YLR018C PSO2P30620 661 aa10.98□□□□□ -0.65
POM34YLR018C SEC8P32855 1065 aa10.98□□□□□ -0.65
POM34YLR018C DBP7P36120 742 aaKnown RBP10.98□□□□□ -0.65
POM34YLR018C NUP82P40368 713 aa10.98□□□□□ -0.65
POM34YLR018C ZPR1P53303 486 aaKnown RBP10.98□□□□□ -0.65
POM34YLR018C GFD1Q04839 188 aaKnown RBP10.98□□□□□ -0.65
POM34YLR018C SPP382Q06411 708 aaPredicted RBP10.98□□□□□ -0.65
POM34YLR018C TMA16Q08687 178 aa10.98□□□□□ -0.65
POM34YLR018C MSC6Q08818 692 aaKnown RBP10.98□□□□□ -0.65
POM34YLR018C CDC37P06101 506 aaKnown RBP10.97□□□□□ -0.65
POM34YLR018C CDC48P25694 835 aaKnown RBP10.97□□□□□ -0.65
POM34YLR018C YKL091CP33324 310 aaKnown RBP10.97□□□□□ -0.65
POM34YLR018C TFC4P33339 1025 aa10.97□□□□□ -0.65
POM34YLR018C BCD1P38772 366 aa10.97□□□□□ -0.65
POM34YLR018C RPN3P40016 523 aaKnown RBP10.97□□□□□ -0.65
POM34YLR018C YMR321CQ04898 105 aa10.97□□□□□ -0.65
POM34YLR018C YOL075CQ08234 1294 aa10.97□□□□□ -0.65
POM34YLR018C TOM1Q03280 3268 aa10.97□□□□□ -0.65
POM34YLR018C FIS1P40515 155 aa10.96□□□□□ -0.65
POM34YLR018C TFG2P41896 400 aaPredicted RBP10.96□□□□□ -0.65
POM34YLR018C PRP22P24384 1145 aaKnown RBP10.95□□□□□ -0.66
POM34YLR018C YUR1P26725 428 aa10.95□□□□□ -0.66
POM34YLR018C MCM2P29469 868 aa10.95□□□□□ -0.66
POM34YLR018C HMF1P40037 129 aaKnown RBP10.95□□□□□ -0.66
POM34YLR018C MGA2P40578 1113 aa10.95□□□□□ -0.66
POM34YLR018C DUS1P53759 423 aaKnown RBP10.95□□□□□ -0.66
POM34YLR018C EBS1Q03466 884 aaKnown RBP10.95□□□□□ -0.66
POM34YLR018C NCR1Q12200 1170 aa10.95□□□□□ -0.66
POM34YLR018C MRC1P25588 1096 aa10.94□□□□□ -0.66
POM34YLR018C YET1P35723 206 aa10.94□□□□□ -0.66
POM34YLR018C TVP38P36164 337 aa10.94□□□□□ -0.66
POM34YLR018C TOF1P53840 1238 aa10.94□□□□□ -0.66
POM34YLR018C YDL057WQ07379 328 aa10.94□□□□□ -0.66
POM34YLR018C TRM11Q12463 433 aa10.94□□□□□ -0.66
POM34YLR018C OM45P16547 393 aa10.93□□□□□ -0.66
POM34YLR018C PRE10P21242 288 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
POM34YLR018C DAL7P21826 554 aa10.93□□□□□ -0.66
POM34YLR018C RGT1P32862 1170 aa10.93□□□□□ -0.66
POM34YLR018C MPE1P35728 441 aaKnown RBP10.93□□□□□ -0.66
POM34YLR018C MXR1P40029 184 aa10.93□□□□□ -0.66
POM34YLR018C YFL034WP43564 1073 aa10.93□□□□□ -0.66
POM34YLR018C AIP1P46680 615 aaKnown RBP10.93□□□□□ -0.66
POM34YLR018C VPS53P47061 822 aa10.93□□□□□ -0.66
POM34YLR018C RPS7BP48164 190 aaKnown RBP10.93□□□□□ -0.66
POM34YLR018C SCS3P53012 380 aa10.93□□□□□ -0.66
POM34YLR018C NCS2P53923 493 aaPredicted RBP10.93□□□□□ -0.66
POM34YLR018C ARK1P53974 638 aa10.93□□□□□ -0.66
POM34YLR018C MET7Q08645 548 aa10.93□□□□□ -0.66
POM34YLR018C MSH3P25336 1018 aa10.92□□□□□ -0.66
POM34YLR018C ATG19P35193 415 aa10.92□□□□□ -0.66
POM34YLR018C PGM2P37012 569 aaKnown RBP10.92□□□□□ -0.66
POM34YLR018C SPT8P38915 602 aa10.92□□□□□ -0.66
POM34YLR018C BIM1P40013 344 aa10.92□□□□□ -0.66
POM34YLR018C TOS3P43637 560 aa10.92□□□□□ -0.66
POM34YLR018C SEC5P89102 971 aa10.92□□□□□ -0.66
POM34YLR018C GPI13Q07830 1017 aa10.92□□□□□ -0.66
POM34YLR018C YPL277CQ08989 487 aa10.92□□□□□ -0.66
POM34YLR018C YLL058WQ12198 575 aa10.92□□□□□ -0.66
POM34YLR018C SRF1Q12516 437 aa10.92□□□□□ -0.66
POM34YLR018C TCP1P12612 559 aaKnown RBP10.91□□□□□ -0.66
POM34YLR018C DBP5P20449 482 aaKnown RBP10.91□□□□□ -0.66
POM34YLR018C YEL025CP39991 1188 aa10.91□□□□□ -0.66
POM34YLR018C HUL4P40985 892 aa10.91□□□□□ -0.66
POM34YLR018C NBP1P52919 319 aaPredicted RBP10.91□□□□□ -0.66
POM34YLR018C NOC3Q07896 663 aaPredicted RBP10.91□□□□□ -0.66
POM34YLR018C SAP190P36123 1033 aa10.9□□□□□ -0.66
POM34YLR018C PDC1P06169 563 aaKnown RBP10.89□□□□□ -0.67
POM34YLR018C DED1P06634 604 aaKnown RBP10.89□□□□□ -0.67
POM34YLR018C TRK2P28584 889 aa10.89□□□□□ -0.67
POM34YLR018C SEC65P29478 273 aa10.89□□□□□ -0.67
POM34YLR018C MRF1P30775 413 aaPredicted RBP10.89□□□□□ -0.67
POM34YLR018C RPC25P35718 212 aa10.89□□□□□ -0.67
POM34YLR018C UBP13P38187 747 aa10.89□□□□□ -0.67
POM34YLR018C ERC1P38767 581 aa10.89□□□□□ -0.67
POM34YLR018C NCS6P53088 359 aa10.89□□□□□ -0.67
POM34YLR018C YAP7Q08182 245 aa10.89□□□□□ -0.67
POM34YLR018C SMC5Q08204 1093 aa10.89□□□□□ -0.67
POM34YLR018C TCO89Q08921 799 aa10.89□□□□□ -0.67
POM34YLR018C SCP160P06105 1222 aaKnown RBP RIP-Chip data10.88□□□□□ -0.67 RIP-Chip
POM34YLR018C PCK1P10963 549 aa10.88□□□□□ -0.67
POM34YLR018C YEL1P34225 687 aa10.88□□□□□ -0.67
POM34YLR018C FLR1P38124 548 aa10.88□□□□□ -0.67
POM34YLR018C FKS1P38631 1876 aaKnown RBP10.88□□□□□ -0.67
POM34YLR018C CTM1P38818 585 aa10.88□□□□□ -0.67
POM34YLR018C CCM1P48237 864 aaPredicted RBP10.88□□□□□ -0.67
POM34YLR018C RPS6AP0CX37 236 aaKnown RBP10.87□□□□□ -0.67
POM34YLR018C RPS6BP0CX38 236 aaPredicted RBP10.87□□□□□ -0.67
POM34YLR018C POX1P13711 748 aa10.87□□□□□ -0.67
POM34YLR018C EBP2P36049 427 aaKnown RBP10.87□□□□□ -0.67
POM34YLR018C MIP6P38760 659 aaKnown RBP10.87□□□□□ -0.67
POM34YLR018C PSF2P40359 213 aa10.87□□□□□ -0.67
POM34YLR018C FYV8P46949 817 aaKnown RBP10.87□□□□□ -0.67
POM34YLR018C AVT1P47082 602 aa10.87□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms