RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT3	YKL146W	MPE1	P35728	441 aa	Known RBP	5.69	□□□□□ -1.5
AVT3	YKL146W	EBP2	P36049	427 aa	Known RBP	5.69	□□□□□ -1.5
AVT3	YKL146W	YEL076C	P39971	216 aa		5.69	□□□□□ -1.5
AVT3	YKL146W	PTA1	Q01329	785 aa	Predicted RBP	5.69	□□□□□ -1.5
AVT3	YKL146W	WHI4	Q07655	649 aa	Known RBP	5.69	□□□□□ -1.5
AVT3	YKL146W	CDC37	P06101	506 aa	Known RBP	5.68	□□□□□ -1.5
AVT3	YKL146W	MCM2	P29469	868 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	PSY4	P38193	441 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	ERG7	P38604	731 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	SIP3	P38717	1229 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	PIH1	P38768	344 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	BCD1	P38772	366 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	YGR237C	P50089	785 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	YGR125W	P53273	1036 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	SPP382	Q06411	708 aa	Predicted RBP	5.68	□□□□□ -1.5
AVT3	YKL146W	ISA1	Q07821	250 aa	Predicted RBP	5.68	□□□□□ -1.5
AVT3	YKL146W	PGK1	P00560	416 aa	Known RBP	5.68	□□□□□ -1.5
AVT3	YKL146W	CLN3	P13365	580 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	ESS1	P22696	170 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	CLB5	P30283	435 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	CDC3	P32457	520 aa	Known RBP	5.68	□□□□□ -1.5
AVT3	YKL146W	ASH1	P34233	588 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	UBP11	P36026	717 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	APE3	P37302	537 aa	Known RBP	5.68	□□□□□ -1.5
AVT3	YKL146W	RSC30	P38781	883 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	NUP82	P40368	713 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	SPR3	P41901	512 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	GUP1	P53154	560 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	RTS3	P53289	263 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	DIP5	P53388	608 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	SLD5	Q03406	294 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	SVF1	Q05515	481 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	PHM6	Q05637	104 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	FUS2	Q05670	677 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	NOB1	Q08444	459 aa	Known RBP	5.68	□□□□□ -1.5
AVT3	YKL146W	TMA16	Q08687	178 aa		5.68	□□□□□ -1.5
AVT3	YKL146W	SUP45	P12385	437 aa	Known RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	PFK1	P16861	987 aa	Known RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	COQ8	P27697	501 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	PSO2	P30620	661 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	SUV3	P32580	737 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	YKL091C	P33324	310 aa	Known RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	PPS1	P38148	807 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	REG2	P38232	338 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	GPD2	P41911	440 aa	Known RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	BRE2	P43132	505 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	LSC2	P53312	427 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	CRD1	Q07560	283 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	ERP3	Q12403	225 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	SRD1	P09007	221 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	OM45	P16547	393 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	TKL1	P23254	680 aa	Known RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	MRC1	P25588	1096 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	SAP190	P36123	1033 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	ULP2	P40537	1034 aa	Predicted RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	CTR1	P49573	406 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	UBP15	P50101	1230 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	YGL039W	P53183	348 aa	Known RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	TPO2	P53283	614 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	ATF2	P53296	535 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	ZPR1	P53303	486 aa	Known RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	SEC5	P89102	971 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	EBS1	Q03466	884 aa	Known RBP	5.67	□□□□□ -1.5
AVT3	YKL146W	YPL216W	Q08964	1102 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	TY3A-G	Q12173	290 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	TY3A-I	Q99219	290 aa		5.67	□□□□□ -1.5
AVT3	YKL146W	MSH3	P25336	1018 aa		5.66	□□□□□ -1.5
AVT3	YKL146W	SEC8	P32855	1065 aa		5.66	□□□□□ -1.5
AVT3	YKL146W	YET1	P35723	206 aa		5.66	□□□□□ -1.5
AVT3	YKL146W	VPS29	P38759	282 aa		5.66	□□□□□ -1.5
AVT3	YKL146W	SPT8	P38915	602 aa		5.66	□□□□□ -1.5
AVT3	YKL146W	RPN3	P40016	523 aa	Known RBP	5.66	□□□□□ -1.5
AVT3	YKL146W	REF2	P42073	533 aa	Predicted RBP	5.66	□□□□□ -1.5
AVT3	YKL146W	DUS4	Q06063	367 aa		5.66	□□□□□ -1.5
AVT3	YKL146W	CYC8	P14922	966 aa		5.65	□□□□□ -1.5
AVT3	YKL146W	FIS1	P40515	155 aa		5.65	□□□□□ -1.5
AVT3	YKL146W	YFL034W	P43564	1073 aa		5.65	□□□□□ -1.5
AVT3	YKL146W	AIP1	P46680	615 aa	Known RBP	5.65	□□□□□ -1.5
AVT3	YKL146W	SUB1	P54000	292 aa	Known RBP	5.65	□□□□□ -1.5
AVT3	YKL146W	YOL075C	Q08234	1294 aa		5.65	□□□□□ -1.5
AVT3	YKL146W	PRP22	P24384	1145 aa	Known RBP	5.65	□□□□□ -1.51
AVT3	YKL146W	CDC48	P25694	835 aa	Known RBP	5.65	□□□□□ -1.51
AVT3	YKL146W	TFC4	P33339	1025 aa		5.65	□□□□□ -1.51
AVT3	YKL146W	CTM1	P38818	585 aa		5.65	□□□□□ -1.51
AVT3	YKL146W	HMF1	P40037	129 aa	Known RBP	5.65	□□□□□ -1.51
AVT3	YKL146W	FYV8	P46949	817 aa	Known RBP	5.65	□□□□□ -1.51
AVT3	YKL146W	VPS75	P53853	264 aa		5.65	□□□□□ -1.51
AVT3	YKL146W	MSC6	Q08818	692 aa	Known RBP	5.65	□□□□□ -1.51
AVT3	YKL146W	ECM29	P38737	1868 aa		5.64	□□□□□ -1.51
AVT3	YKL146W	PDC1	P06169	563 aa	Known RBP	5.64	□□□□□ -1.51
AVT3	YKL146W	MOT2	P34909	587 aa	Known RBP	5.64	□□□□□ -1.51
AVT3	YKL146W	ATG19	P35193	415 aa		5.64	□□□□□ -1.51
AVT3	YKL146W	TVP38	P36164	337 aa		5.64	□□□□□ -1.51
AVT3	YKL146W	TOS3	P43637	560 aa		5.64	□□□□□ -1.51
AVT3	YKL146W	ATG1	P53104	897 aa		5.64	□□□□□ -1.51
AVT3	YKL146W	TOF1	P53840	1238 aa		5.64	□□□□□ -1.51
AVT3	YKL146W	NCS2	P53923	493 aa	Predicted RBP	5.64	□□□□□ -1.51
AVT3	YKL146W	YPL277C	Q08989	487 aa		5.64	□□□□□ -1.51
AVT3	YKL146W	TIF6	Q12522	245 aa	Known RBP	5.64	□□□□□ -1.51
AVT3	YKL146W	TIF1	P10081	395 aa	Known RBP	5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms