RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	YSC84	P32793	468 aa		4.27	□□□□□ -1.73
NDC80	YIL144W	FPR3	P38911	411 aa	Known RBP	4.27	□□□□□ -1.73
NDC80	YIL144W	CCC2	P38995	1004 aa		4.27	□□□□□ -1.73
NDC80	YIL144W	SIT1	P39980	628 aa		4.27	□□□□□ -1.73
NDC80	YIL144W	MTC3	P53077	123 aa		4.27	□□□□□ -1.73
NDC80	YIL144W	DNM1	P54861	757 aa		4.27	□□□□□ -1.73
NDC80	YIL144W	HRQ1	Q05549	1077 aa		4.27	□□□□□ -1.73
NDC80	YIL144W	YDR215C	Q12240	137 aa		4.27	□□□□□ -1.73
NDC80	YIL144W	SAM35	P14693	329 aa		4.26	□□□□□ -1.73
NDC80	YIL144W	MSD1	P15179	658 aa	Known RBP	4.26	□□□□□ -1.73
NDC80	YIL144W	MSH2	P25847	964 aa		4.26	□□□□□ -1.73
NDC80	YIL144W	HSV2	P50079	448 aa	Predicted RBP	4.26	□□□□□ -1.73
NDC80	YIL144W	SUB1	P54000	292 aa	Known RBP	4.26	□□□□□ -1.73
NDC80	YIL144W	TPP1	Q03796	238 aa		4.26	□□□□□ -1.73
NDC80	YIL144W	NTG2	Q08214	380 aa		4.26	□□□□□ -1.73
NDC80	YIL144W	YPR071W	Q12346	211 aa		4.26	□□□□□ -1.73
NDC80	YIL144W	GDH3	P39708	457 aa		4.26	□□□□□ -1.73
NDC80	YIL144W	RPN3	P40016	523 aa	Known RBP	4.26	□□□□□ -1.73
NDC80	YIL144W	UBP6	P43593	499 aa	Known RBP	4.26	□□□□□ -1.73
NDC80	YIL144W	ARI1	P53111	347 aa	Known RBP	4.26	□□□□□ -1.73
NDC80	YIL144W	HOS3	Q02959	697 aa	Known RBP	4.26	□□□□□ -1.73
NDC80	YIL144W	DUS3	Q06053	668 aa	Known RBP	4.26	□□□□□ -1.73
NDC80	YIL144W	GIC2	Q06648	383 aa		4.26	□□□□□ -1.73
NDC80	YIL144W	MEF1	P25039	761 aa		4.25	□□□□□ -1.73
NDC80	YIL144W	CDC12	P32468	407 aa	Known RBP	4.25	□□□□□ -1.73
NDC80	YIL144W	UGA2	P38067	497 aa		4.25	□□□□□ -1.73
NDC80	YIL144W	NPP2	P39997	493 aa		4.25	□□□□□ -1.73
NDC80	YIL144W	POB3	Q04636	552 aa	Known RBP	4.25	□□□□□ -1.73
NDC80	YIL144W	YVC1	Q12324	675 aa		4.25	□□□□□ -1.73
NDC80	YIL144W	RPL8A	P17076	256 aa	Known RBP	4.25	□□□□□ -1.73
NDC80	YIL144W	PET10	P36139	283 aa		4.25	□□□□□ -1.73
NDC80	YIL144W	SNF7	P39929	240 aa	Known RBP	4.25	□□□□□ -1.73
NDC80	YIL144W	TPO2	P53283	614 aa		4.25	□□□□□ -1.73
NDC80	YIL144W	VPS72	Q03388	795 aa		4.25	□□□□□ -1.73
NDC80	YIL144W	YDL124W	Q07551	312 aa	Known RBP	4.25	□□□□□ -1.73
NDC80	YIL144W	ACM1	Q08981	209 aa		4.25	□□□□□ -1.73
NDC80	YIL144W	NOP14	Q99207	810 aa	Known RBP	4.25	□□□□□ -1.73
NDC80	YIL144W	RSC6	P25632	483 aa		4.24	□□□□□ -1.73
NDC80	YIL144W	AAR2	P32357	355 aa	Predicted RBP	4.24	□□□□□ -1.73
NDC80	YIL144W	GRX4	P32642	244 aa		4.24	□□□□□ -1.73
NDC80	YIL144W	GEM1	P39722	662 aa		4.24	□□□□□ -1.73
NDC80	YIL144W	MCA1	Q08601	432 aa		4.24	□□□□□ -1.73
NDC80	YIL144W	BI4	P03879	638 aa		4.23	□□□□□ -1.73
NDC80	YIL144W	WHI3	P34761	661 aa	Known RBP	4.23	□□□□□ -1.73
NDC80	YIL144W	TY4A-J	P47023	414 aa		4.23	□□□□□ -1.73
NDC80	YIL144W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
NDC80	YIL144W	ZDS1	P50111	915 aa	Known RBP	4.23	□□□□□ -1.73
NDC80	YIL144W	HRK1	Q08732	759 aa	Known RBP	4.23	□□□□□ -1.73
NDC80	YIL144W	GIN4	Q12263	1142 aa		4.23	□□□□□ -1.73
NDC80	YIL144W	PRO1	P32264	428 aa		4.23	□□□□□ -1.73
NDC80	YIL144W	PGM1	P33401	570 aa	Known RBP	4.23	□□□□□ -1.73
NDC80	YIL144W	AKR1	P39010	764 aa		4.23	□□□□□ -1.73
NDC80	YIL144W	IRC24	P40580	263 aa		4.23	□□□□□ -1.73
NDC80	YIL144W	MDM12	Q92328	271 aa		4.23	□□□□□ -1.73
NDC80	YIL144W	TOK1	P40310	691 aa		4.22	□□□□□ -1.73
NDC80	YIL144W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
NDC80	YIL144W	TOM70	P07213	617 aa	Known RBP	4.22	□□□□□ -1.73
NDC80	YIL144W	TSR4	P25040	408 aa		4.22	□□□□□ -1.73
NDC80	YIL144W	CDC11	P32458	415 aa		4.22	□□□□□ -1.73
NDC80	YIL144W	TSL1	P38427	1098 aa	Known RBP	4.22	□□□□□ -1.73
NDC80	YIL144W	OYE3	P41816	400 aa	Predicted RBP	4.22	□□□□□ -1.73
NDC80	YIL144W	MDG1	P53885	366 aa		4.22	□□□□□ -1.73
NDC80	YIL144W	UGO1	Q03327	502 aa		4.22	□□□□□ -1.73
NDC80	YIL144W	YGR161W-C	Q3E744	92 aa		4.22	□□□□□ -1.73
NDC80	YIL144W	PPH3	P32345	308 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	ABZ1	P37254	787 aa	Predicted RBP	4.21	□□□□□ -1.74
NDC80	YIL144W	YRO2	P38079	344 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	PEX7	P39108	375 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	UBP12	P39538	1254 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	MMM1	P41800	426 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	GYP8	P43570	497 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	TNA1	P53322	534 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	YNR029C	P53729	429 aa	Known RBP	4.21	□□□□□ -1.74
NDC80	YIL144W	LCD1	Q04377	747 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	MDM38	Q08179	573 aa		4.21	□□□□□ -1.74
NDC80	YIL144W	BUD21	Q08492	214 aa	Predicted RBP	4.21	□□□□□ -1.74
NDC80	YIL144W	ADR1	P07248	1323 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	DOM34	P33309	386 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	PEX6	P33760	1030 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	GIC1	P38785	314 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	SAH1	P39954	449 aa	Known RBP	4.2	□□□□□ -1.74
NDC80	YIL144W	GLT1	Q12680	2145 aa	Known RBP	4.2	□□□□□ -1.74
NDC80	YIL144W	ADE8	P04161	214 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	ACE2	P21192	770 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	SRM1	P21827	482 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	MAC1	P35192	417 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	SEC26	P41810	973 aa	Known RBP	4.2	□□□□□ -1.74
NDC80	YIL144W	YKE2	P52553	114 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	TFB2	Q02939	513 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	UTP14	Q04500	899 aa	Known RBP	4.2	□□□□□ -1.74
NDC80	YIL144W	YLR001C	Q07895	862 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	XYL2	Q07993	356 aa		4.2	□□□□□ -1.74
NDC80	YIL144W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
NDC80	YIL144W	SPC29	P33419	253 aa		4.19	□□□□□ -1.74
NDC80	YIL144W	SAF1	P38352	637 aa		4.19	□□□□□ -1.74
NDC80	YIL144W	YHL012W	P38709	493 aa		4.19	□□□□□ -1.74
NDC80	YIL144W	PIK1	P39104	1066 aa		4.19	□□□□□ -1.74
NDC80	YIL144W	SFB2	P53953	876 aa		4.19	□□□□□ -1.74
NDC80	YIL144W	SRP1	Q02821	542 aa	Known RBP	4.19	□□□□□ -1.74
NDC80	YIL144W	SRT1	Q03175	343 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms