RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C PXA1P41909 870 aa9.42□□□□□ -0.9
SSL2YIL143C YNL320WP42840 284 aa9.42□□□□□ -0.9
SSL2YIL143C YFL034WP43564 1073 aa9.42□□□□□ -0.9
SSL2YIL143C YFH7P43591 353 aa9.42□□□□□ -0.9
SSL2YIL143C ZPR1P53303 486 aaKnown RBP9.42□□□□□ -0.9
SSL2YIL143C ERG11P10614 530 aa9.42□□□□□ -0.9
SSL2YIL143C SRP54P20424 541 aaKnown RBP9.42□□□□□ -0.9
SSL2YIL143C NIP100P33420 868 aa9.42□□□□□ -0.9
SSL2YIL143C NSG2P53898 299 aa9.42□□□□□ -0.9
SSL2YIL143C PMD1P32634 1753 aa9.42□□□□□ -0.9
SSL2YIL143C CAF20P12962 161 aaKnown RBP9.41□□□□□ -0.9
SSL2YIL143C ISY1P21374 235 aaPredicted RBP9.41□□□□□ -0.9
SSL2YIL143C PDB1P32473 366 aaKnown RBP9.41□□□□□ -0.9
SSL2YIL143C SAS3P34218 831 aa9.41□□□□□ -0.9
SSL2YIL143C ASE1P50275 885 aa9.41□□□□□ -0.9
SSL2YIL143C ADA2Q02336 434 aa9.41□□□□□ -0.9
SSL2YIL143C SYF1Q04048 859 aaPredicted RBP9.41□□□□□ -0.9
SSL2YIL143C DSE3Q08729 430 aa9.41□□□□□ -0.9
SSL2YIL143C FRD1P32614 470 aaKnown RBP9.41□□□□□ -0.9
SSL2YIL143C OAF3P36023 863 aa9.41□□□□□ -0.9
SSL2YIL143C YKR018CP36114 725 aa9.41□□□□□ -0.9
SSL2YIL143C TOF1P53840 1238 aa9.41□□□□□ -0.9
SSL2YIL143C ARD1P07347 238 aaPredicted RBP9.4□□□□□ -0.9
SSL2YIL143C PPS1P38148 807 aa9.4□□□□□ -0.9
SSL2YIL143C RPC17P47076 161 aa9.4□□□□□ -0.9
SSL2YIL143C CBK1P53894 756 aa9.4□□□□□ -0.9
SSL2YIL143C UTP14Q04500 899 aaKnown RBP9.4□□□□□ -0.9
SSL2YIL143C MLH2Q07980 695 aa9.4□□□□□ -0.9
SSL2YIL143C PRI1P10363 409 aa9.4□□□□□ -0.91
SSL2YIL143C PYC1P11154 1178 aaKnown RBP9.4□□□□□ -0.91
SSL2YIL143C TOM71P38825 639 aaKnown RBP9.4□□□□□ -0.91
SSL2YIL143C YJR142WP47173 342 aa9.4□□□□□ -0.91
SSL2YIL143C KAP114P53067 1004 aa9.4□□□□□ -0.91
SSL2YIL143C BNI5P53890 448 aaKnown RBP9.4□□□□□ -0.91
SSL2YIL143C ECI1Q05871 280 aa9.4□□□□□ -0.91
SSL2YIL143C YPR078CQ06813 372 aa9.4□□□□□ -0.91
SSL2YIL143C SEC39Q12745 709 aa9.4□□□□□ -0.91
SSL2YIL143C SNF3P10870 884 aa9.39□□□□□ -0.91
SSL2YIL143C UBC6P33296 250 aaPredicted RBP9.39□□□□□ -0.91
SSL2YIL143C EMP47P43555 445 aa9.39□□□□□ -0.91
SSL2YIL143C MDM1Q01846 1127 aa9.39□□□□□ -0.91
SSL2YIL143C PIG1Q06216 648 aa9.39□□□□□ -0.91
SSL2YIL143C BDF2Q07442 638 aa9.39□□□□□ -0.91
SSL2YIL143C SMC6Q12749 1114 aa9.39□□□□□ -0.91
SSL2YIL143C ARG82P07250 355 aa9.39□□□□□ -0.91
SSL2YIL143C GAL11P19659 1081 aa9.39□□□□□ -0.91
SSL2YIL143C APL1P27351 700 aa9.39□□□□□ -0.91
SSL2YIL143C OCA5P38738 679 aa9.39□□□□□ -0.91
SSL2YIL143C CCT3P39077 534 aaKnown RBP9.39□□□□□ -0.91
SSL2YIL143C USA1Q03714 838 aa9.39□□□□□ -0.91
SSL2YIL143C CDC10P25342 322 aaKnown RBP9.38□□□□□ -0.91
SSL2YIL143C ORC6P38826 435 aa9.38□□□□□ -0.91
SSL2YIL143C BIM1P40013 344 aa9.38□□□□□ -0.91
SSL2YIL143C YEL076C-AP0CX16 216 aa9.38□□□□□ -0.91
SSL2YIL143C YLR464WP0CX17 216 aa9.38□□□□□ -0.91
SSL2YIL143C KRS1P15180 591 aaKnown RBP9.38□□□□□ -0.91
SSL2YIL143C PRP9P19736 530 aaKnown RBP9.38□□□□□ -0.91
SSL2YIL143C KRE2P27809 442 aa9.38□□□□□ -0.91
SSL2YIL143C UBP5P39944 805 aa9.38□□□□□ -0.91
SSL2YIL143C YEL076CP39971 216 aa9.38□□□□□ -0.91
SSL2YIL143C RIO2P40160 425 aaKnown RBP9.38□□□□□ -0.91
SSL2YIL143C JJJ2P46997 583 aa9.38□□□□□ -0.91
SSL2YIL143C YJR039WP47107 1121 aa9.38□□□□□ -0.91
SSL2YIL143C SGM1P47166 707 aa9.38□□□□□ -0.91
SSL2YIL143C VPS30Q02948 557 aa9.38□□□□□ -0.91
SSL2YIL143C CSM3Q04659 317 aa9.38□□□□□ -0.91
SSL2YIL143C YLH47Q06493 454 aa9.38□□□□□ -0.91
SSL2YIL143C RAM2P29703 316 aa9.37□□□□□ -0.91
SSL2YIL143C LOS1P33418 1100 aaPredicted RBP9.37□□□□□ -0.91
SSL2YIL143C RPN11P43588 306 aaKnown RBP9.37□□□□□ -0.91
SSL2YIL143C YJL181WP46987 611 aa9.37□□□□□ -0.91
SSL2YIL143C SAS4Q04003 481 aa9.37□□□□□ -0.91
SSL2YIL143C DIB1Q06819 143 aaPredicted RBP9.37□□□□□ -0.91
SSL2YIL143C SWI3P32591 825 aa9.37□□□□□ -0.91
SSL2YIL143C TAF9Q05027 157 aa9.37□□□□□ -0.91
SSL2YIL143C GSY1P23337 708 aa9.36□□□□□ -0.91
SSL2YIL143C YGR273CP53329 174 aa9.36□□□□□ -0.91
SSL2YIL143C GRX3Q03835 250 aa9.36□□□□□ -0.91
SSL2YIL143C AIM33Q04516 312 aa9.36□□□□□ -0.91
SSL2YIL143C PNP1Q05788 311 aa9.36□□□□□ -0.91
SSL2YIL143C YAH1Q12184 172 aaKnown RBP9.36□□□□□ -0.91
SSL2YIL143C RIO1Q12196 484 aaKnown RBP9.36□□□□□ -0.91
SSL2YIL143C YBR062CP38239 180 aa9.36□□□□□ -0.91
SSL2YIL143C NMD5P46970 1048 aa9.36□□□□□ -0.91
SSL2YIL143C URB2P47108 1174 aa9.36□□□□□ -0.91
SSL2YIL143C GUP1P53154 560 aa9.36□□□□□ -0.91
SSL2YIL143C BUG1Q12191 341 aa9.36□□□□□ -0.91
SSL2YIL143C HKR1P41809 1802 aa9.35□□□□□ -0.91
SSL2YIL143C SCP160P06105 1222 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91 RIP-Chip
SSL2YIL143C MAK16P10962 306 aaPredicted RBP9.35□□□□□ -0.91
SSL2YIL143C PRP4P20053 465 aaKnown RBP9.35□□□□□ -0.91
SSL2YIL143C SQT1P35184 431 aa9.35□□□□□ -0.91
SSL2YIL143C NCS2P53923 493 aaPredicted RBP9.35□□□□□ -0.91
SSL2YIL143C YPL109CQ02981 657 aa9.35□□□□□ -0.91
SSL2YIL143C RIX7Q07844 837 aaKnown RBP9.35□□□□□ -0.91
SSL2YIL143C KEL3Q08979 651 aaPredicted RBP9.35□□□□□ -0.91
SSL2YIL143C CKA2P19454 339 aa9.35□□□□□ -0.91
SSL2YIL143C SMX2P40204 77 aaKnown RBP9.35□□□□□ -0.91
SSL2YIL143C AIM21P40563 679 aa9.35□□□□□ -0.91
SSL2YIL143C ILM1P47155 203 aa9.35□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms