RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W PCT1P13259 424 aa5.11□□□□□ -1.59
PRE9YGR135W PGM1P33401 570 aaKnown RBP5.11□□□□□ -1.59
PRE9YGR135W MRP8P35719 219 aa5.11□□□□□ -1.59
PRE9YGR135W RVS167P39743 482 aaKnown RBP5.11□□□□□ -1.59
PRE9YGR135W INP51P40559 946 aaKnown RBP5.11□□□□□ -1.59
PRE9YGR135W LEM3P42838 414 aa5.11□□□□□ -1.59
PRE9YGR135W HLJ1P48353 224 aa5.11□□□□□ -1.59
PRE9YGR135W ZDS1P50111 915 aaKnown RBP5.11□□□□□ -1.59
PRE9YGR135W NUT1P53114 1132 aa5.11□□□□□ -1.59
PRE9YGR135W FMP25Q08023 583 aa5.11□□□□□ -1.59
PRE9YGR135W NTG2Q08214 380 aa5.11□□□□□ -1.59
PRE9YGR135W TY4A-HQ6Q5P6 413 aa5.11□□□□□ -1.59
PRE9YGR135W RPA190P10964 1664 aaKnown RBP5.1□□□□□ -1.59
PRE9YGR135W FUS1P11710 512 aa5.1□□□□□ -1.59
PRE9YGR135W KAR1P11927 433 aa5.1□□□□□ -1.59
PRE9YGR135W RPL8AP17076 256 aaKnown RBP5.1□□□□□ -1.59
PRE9YGR135W MRC1P25588 1096 aa5.1□□□□□ -1.59
PRE9YGR135W RSC6P25632 483 aa5.1□□□□□ -1.59
PRE9YGR135W ABD1P32783 436 aaPredicted RBP5.1□□□□□ -1.59
PRE9YGR135W ESL2P36168 1195 aa5.1□□□□□ -1.59
PRE9YGR135W GUP1P53154 560 aa5.1□□□□□ -1.59
PRE9YGR135W ERP6P53198 216 aa5.1□□□□□ -1.59
PRE9YGR135W DSE4P53753 1117 aa5.1□□□□□ -1.59
PRE9YGR135W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
PRE9YGR135W AGP1P25376 633 aa5.09□□□□□ -1.59
PRE9YGR135W MSH2P25847 964 aa5.09□□□□□ -1.59
PRE9YGR135W VBA5P36172 582 aa5.09□□□□□ -1.59
PRE9YGR135W IRR1P40541 1150 aa5.09□□□□□ -1.59
PRE9YGR135W DJP1P40564 432 aa5.09□□□□□ -1.59
PRE9YGR135W BIO5P53744 561 aaKnown RBP5.09□□□□□ -1.59
PRE9YGR135W PEX13P80667 386 aa5.09□□□□□ -1.59
PRE9YGR135W SOG2Q08817 791 aa5.09□□□□□ -1.59
PRE9YGR135W SPO14P36126 1683 aa5.08□□□□□ -1.6
PRE9YGR135W DNF2Q12675 1612 aa5.08□□□□□ -1.6
PRE9YGR135W TRP2P00899 507 aaKnown RBP5.08□□□□□ -1.6
PRE9YGR135W YEF3P16521 1044 aaKnown RBP5.08□□□□□ -1.6
PRE9YGR135W SBA1P28707 216 aaKnown RBP5.08□□□□□ -1.6
PRE9YGR135W COQ2P32378 372 aa5.08□□□□□ -1.6
PRE9YGR135W PEX28P38848 579 aa5.08□□□□□ -1.6
PRE9YGR135W GEM1P39722 662 aa5.08□□□□□ -1.6
PRE9YGR135W CTR9P89105 1077 aa5.08□□□□□ -1.6
PRE9YGR135W TFB2Q02939 513 aa5.08□□□□□ -1.6
PRE9YGR135W YLR225CQ05948 407 aaKnown RBP5.08□□□□□ -1.6
PRE9YGR135W ESC2Q06340 456 aa5.08□□□□□ -1.6
PRE9YGR135W TY1A-NL1Q12391 440 aaKnown RBP5.08□□□□□ -1.6
PRE9YGR135W EDE1P34216 1381 aa5.07□□□□□ -1.6
PRE9YGR135W NUP145P49687 1317 aa5.07□□□□□ -1.6
PRE9YGR135W COBP00163 385 aa5.07□□□□□ -1.6
PRE9YGR135W SPE2P21182 396 aa5.07□□□□□ -1.6
PRE9YGR135W MSP1P28737 362 aa5.07□□□□□ -1.6
PRE9YGR135W PYC2P32327 1180 aaKnown RBP5.07□□□□□ -1.6
PRE9YGR135W LYP1P32487 611 aa5.07□□□□□ -1.6
PRE9YGR135W SCT1P32784 759 aa5.07□□□□□ -1.6
PRE9YGR135W MAC1P35192 417 aa5.07□□□□□ -1.6
PRE9YGR135W SEA4P38164 1038 aa5.07□□□□□ -1.6
PRE9YGR135W ALR2P43553 858 aa5.07□□□□□ -1.6
PRE9YGR135W MPP10P47083 593 aaKnown RBP5.07□□□□□ -1.6
PRE9YGR135W YGR237CP50089 785 aa5.07□□□□□ -1.6
PRE9YGR135W RTA1P53047 317 aa5.07□□□□□ -1.6
PRE9YGR135W SHE9Q04172 456 aa5.07□□□□□ -1.6
PRE9YGR135W PMT7Q06644 662 aa5.07□□□□□ -1.6
PRE9YGR135W YDL124WQ07551 312 aaKnown RBP5.07□□□□□ -1.6
PRE9YGR135W GIN4Q12263 1142 aa5.07□□□□□ -1.6
PRE9YGR135W TMA17Q12513 150 aa5.07□□□□□ -1.6
PRE9YGR135W BNR1P40450 1375 aa5.06□□□□□ -1.6
PRE9YGR135W DUR3P33413 735 aa5.06□□□□□ -1.6
PRE9YGR135W VPS24P36095 224 aaKnown RBP5.06□□□□□ -1.6
PRE9YGR135W TFA2P36145 328 aa5.06□□□□□ -1.6
PRE9YGR135W PBY1P38254 753 aa5.06□□□□□ -1.6
PRE9YGR135W PAN5P38787 379 aa5.06□□□□□ -1.6
PRE9YGR135W HSV2P50079 448 aaPredicted RBP5.06□□□□□ -1.6
PRE9YGR135W PEX8P53248 589 aa5.06□□□□□ -1.6
PRE9YGR135W ATG13Q06628 738 aa5.06□□□□□ -1.6
PRE9YGR135W CHC1P22137 1653 aaKnown RBP5.05□□□□□ -1.6
PRE9YGR135W VMR1P38735 1592 aa5.05□□□□□ -1.6
PRE9YGR135W NOT3P06102 836 aaKnown RBP5.05□□□□□ -1.6
PRE9YGR135W PEX6P33760 1030 aa5.05□□□□□ -1.6
PRE9YGR135W MOT2P34909 587 aaKnown RBP5.05□□□□□ -1.6
PRE9YGR135W RER2P35196 286 aa5.05□□□□□ -1.6
PRE9YGR135W KAE1P36132 386 aa5.05□□□□□ -1.6
PRE9YGR135W NIT1P40447 199 aa5.05□□□□□ -1.6
PRE9YGR135W PFD1P46988 109 aa5.05□□□□□ -1.6
PRE9YGR135W DAS1P47005 663 aa5.05□□□□□ -1.6
PRE9YGR135W PMT3P47190 753 aa5.05□□□□□ -1.6
PRE9YGR135W ALO1P54783 526 aaKnown RBP5.05□□□□□ -1.6
PRE9YGR135W TAF8Q03750 510 aa5.05□□□□□ -1.6
PRE9YGR135W MSH6Q03834 1242 aa5.05□□□□□ -1.6
PRE9YGR135W VMS1Q04311 632 aaKnown RBP5.05□□□□□ -1.6
PRE9YGR135W HDA2Q06629 674 aa5.05□□□□□ -1.6
PRE9YGR135W YDL121CQ07541 149 aa5.05□□□□□ -1.6
PRE9YGR135W SLX4Q12098 748 aa5.05□□□□□ -1.6
PRE9YGR135W NYV1Q12255 253 aa5.05□□□□□ -1.6
PRE9YGR135W DOP1Q03921 1698 aa5.05□□□□□ -1.6
PRE9YGR135W TRM3Q07527 1436 aa5.05□□□□□ -1.6
PRE9YGR135W PRP9P19736 530 aaKnown RBP5.04□□□□□ -1.6
PRE9YGR135W OMA1P36163 345 aa5.04□□□□□ -1.6
PRE9YGR135W GNP1P48813 663 aa5.04□□□□□ -1.6
PRE9YGR135W YGL140CP53120 1219 aa5.04□□□□□ -1.6
PRE9YGR135W UTP8P53276 713 aaKnown RBP5.04□□□□□ -1.6
PRE9YGR135W UGO1Q03327 502 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms