RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A YKL222CP35995 705 aa5.08□□□□□ -1.6
YGR109W-AYGR109W-A SIP5P40210 489 aaKnown RBP5.08□□□□□ -1.6
YGR109W-AYGR109W-A MAD1P40957 749 aa5.08□□□□□ -1.6
YGR109W-AYGR109W-A SPT20P50875 604 aa5.08□□□□□ -1.6
YGR109W-AYGR109W-A ESC2Q06340 456 aa5.08□□□□□ -1.6
YGR109W-AYGR109W-A GIP4P39732 760 aa5.07□□□□□ -1.6
YGR109W-AYGR109W-A VPS16Q03308 798 aa5.07□□□□□ -1.6
YGR109W-AYGR109W-A SVF1Q05515 481 aa5.07□□□□□ -1.6
YGR109W-AYGR109W-A JIP5Q06214 492 aaPredicted RBP5.07□□□□□ -1.6
YGR109W-AYGR109W-A VTS1Q08831 523 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
YGR109W-AYGR109W-A PIN2Q12057 282 aa5.07□□□□□ -1.6
YGR109W-AYGR109W-A PRE10P21242 288 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
YGR109W-AYGR109W-A NAP1P25293 417 aaKnown RBP5.06□□□□□ -1.6
YGR109W-AYGR109W-A ABD1P32783 436 aaPredicted RBP5.06□□□□□ -1.6
YGR109W-AYGR109W-A RRT14P40470 206 aa5.06□□□□□ -1.6
YGR109W-AYGR109W-A HFM1P51979 1187 aa5.06□□□□□ -1.6
YGR109W-AYGR109W-A CWC24P53769 259 aa5.06□□□□□ -1.6
YGR109W-AYGR109W-A SIZ1Q04195 904 aa5.06□□□□□ -1.6
YGR109W-AYGR109W-A DUS4Q06063 367 aa5.06□□□□□ -1.6
YGR109W-AYGR109W-A THS1P04801 734 aaKnown RBP5.05□□□□□ -1.6
YGR109W-AYGR109W-A MTC3P53077 123 aa5.05□□□□□ -1.6
YGR109W-AYGR109W-A MSC2Q03455 724 aa5.05□□□□□ -1.6
YGR109W-AYGR109W-A YLR358CO13565 187 aa5.04□□□□□ -1.6
YGR109W-AYGR109W-A PIN4P34217 668 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
YGR109W-AYGR109W-A FAL1Q12099 399 aaKnown RBP5.04□□□□□ -1.6
YGR109W-AYGR109W-A YKL151CP36059 337 aa5.03□□□□□ -1.6
YGR109W-AYGR109W-A SNF7P39929 240 aaKnown RBP5.03□□□□□ -1.6
YGR109W-AYGR109W-A SNU71P53207 620 aaKnown RBP5.03□□□□□ -1.6
YGR109W-AYGR109W-A CLU1Q03690 1277 aaKnown RBP5.03□□□□□ -1.6
YGR109W-AYGR109W-A RXT3Q07458 294 aa5.03□□□□□ -1.6
YGR109W-AYGR109W-A GPB1Q08886 897 aa5.03□□□□□ -1.6
YGR109W-AYGR109W-A CDC6P09119 513 aa5.02□□□□□ -1.61
YGR109W-AYGR109W-A DOM34P33309 386 aa5.02□□□□□ -1.61
YGR109W-AYGR109W-A GTF1P53260 183 aaPredicted RBP5.02□□□□□ -1.61
YGR109W-AYGR109W-A PBP1P53297 722 aaKnown RBP5.02□□□□□ -1.61
YGR109W-AYGR109W-A HRQ1Q05549 1077 aa5.02□□□□□ -1.61
YGR109W-AYGR109W-A AGP1P25376 633 aa5.01□□□□□ -1.61
YGR109W-AYGR109W-A CDC20P26309 610 aa5.01□□□□□ -1.61
YGR109W-AYGR109W-A SBA1P28707 216 aaKnown RBP5.01□□□□□ -1.61
YGR109W-AYGR109W-A TAT2P38967 592 aa5.01□□□□□ -1.61
YGR109W-AYGR109W-A MBP1P39678 833 aa5.01□□□□□ -1.61
YGR109W-AYGR109W-A KRI1P42846 591 aaKnown RBP5.01□□□□□ -1.61
YGR109W-AYGR109W-A ACK1Q07622 623 aaPredicted RBP5.01□□□□□ -1.61
YGR109W-AYGR109W-A XYL2Q07993 356 aa5.01□□□□□ -1.61
YGR109W-AYGR109W-A OPI10Q08202 246 aa5.01□□□□□ -1.61
YGR109W-AYGR109W-A PRI2P20457 528 aa5□□□□□ -1.61
YGR109W-AYGR109W-A GCV2P49095 1034 aa5□□□□□ -1.61
YGR109W-AYGR109W-A VPS62P53285 467 aa5□□□□□ -1.61
YGR109W-AYGR109W-A MDM38Q08179 573 aa5□□□□□ -1.61
YGR109W-AYGR109W-A OSW2Q12202 724 aa5□□□□□ -1.61
YGR109W-AYGR109W-A CTS1P29029 562 aa4.99□□□□□ -1.61
YGR109W-AYGR109W-A YKL069WP36088 180 aa4.99□□□□□ -1.61
YGR109W-AYGR109W-A VBA5P36172 582 aa4.99□□□□□ -1.61
YGR109W-AYGR109W-A SHM2P37291 469 aaKnown RBP4.99□□□□□ -1.61
YGR109W-AYGR109W-A YAP1801P38856 637 aa4.99□□□□□ -1.61
YGR109W-AYGR109W-A MPT5P39016 859 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
YGR109W-AYGR109W-A VAC8P39968 578 aa4.99□□□□□ -1.61
YGR109W-AYGR109W-A MND2P40577 368 aa4.99□□□□□ -1.61
YGR109W-AYGR109W-A ALD6P54115 500 aaKnown RBP4.99□□□□□ -1.61
YGR109W-AYGR109W-A YLL058WQ12198 575 aa4.99□□□□□ -1.61
YGR109W-AYGR109W-A SAH1P39954 449 aaKnown RBP4.98□□□□□ -1.61
YGR109W-AYGR109W-A YAP6Q03935 383 aa4.98□□□□□ -1.61
YGR109W-AYGR109W-A HMI1Q12039 706 aa4.98□□□□□ -1.61
YGR109W-AYGR109W-A ENA1P13587 1091 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A EMC1P25574 760 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A PAM1P37304 830 aaKnown RBP4.97□□□□□ -1.61
YGR109W-AYGR109W-A GIC1P38785 314 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A ZRG8P40021 1076 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A ENA2Q01896 1091 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A SRT1Q03175 343 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A SHE9Q04172 456 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A TPO1Q07824 586 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A ENA5Q12691 1091 aa4.97□□□□□ -1.61
YGR109W-AYGR109W-A CDC12P32468 407 aaKnown RBP4.96□□□□□ -1.62
YGR109W-AYGR109W-A LST4P34239 828 aa4.96□□□□□ -1.62
YGR109W-AYGR109W-A FUN30P31380 1131 aa4.95□□□□□ -1.62
YGR109W-AYGR109W-A ECM21P38167 1117 aaKnown RBP4.95□□□□□ -1.62
YGR109W-AYGR109W-A POA1P38218 177 aa4.95□□□□□ -1.62
YGR109W-AYGR109W-A NPP2P39997 493 aa4.95□□□□□ -1.62
YGR109W-AYGR109W-A SRP1Q02821 542 aaKnown RBP4.95□□□□□ -1.62
YGR109W-AYGR109W-A YLR224WQ05947 369 aa4.95□□□□□ -1.62
YGR109W-AYGR109W-A DUS3Q06053 668 aaKnown RBP4.95□□□□□ -1.62
YGR109W-AYGR109W-A TMA10Q06177 86 aa4.95□□□□□ -1.62
YGR109W-AYGR109W-A MCM6P53091 1017 aaKnown RBP4.94□□□□□ -1.62
YGR109W-AYGR109W-A YGR012WP53206 393 aa4.94□□□□□ -1.62
YGR109W-AYGR109W-A ADY3Q07732 790 aa4.94□□□□□ -1.62
YGR109W-AYGR109W-A NOP12Q08208 459 aaKnown RBP4.94□□□□□ -1.62
YGR109W-AYGR109W-A STE11P23561 717 aa4.93□□□□□ -1.62
YGR109W-AYGR109W-A SRP101P32916 621 aa4.93□□□□□ -1.62
YGR109W-AYGR109W-A SPF1P39986 1215 aaKnown RBP4.93□□□□□ -1.62
YGR109W-AYGR109W-A MET12P46151 657 aa4.93□□□□□ -1.62
YGR109W-AYGR109W-A GUS1P46655 708 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
YGR109W-AYGR109W-A MNN10P50108 393 aaKnown RBP4.93□□□□□ -1.62
YGR109W-AYGR109W-A CDA1Q06702 301 aa4.93□□□□□ -1.62
YGR109W-AYGR109W-A HIS5P07172 385 aa4.92□□□□□ -1.62
YGR109W-AYGR109W-A MRP8P35719 219 aa4.92□□□□□ -1.62
YGR109W-AYGR109W-A PLB1P39105 664 aa4.92□□□□□ -1.62
YGR109W-AYGR109W-A SFB2P53953 876 aa4.92□□□□□ -1.62
YGR109W-AYGR109W-A TDA5Q06417 326 aaKnown RBP4.92□□□□□ -1.62
YGR109W-AYGR109W-A YDR306CQ06640 478 aa4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms