RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B NUF2P33895 451 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B TEF4P36008 412 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B VPS51P36116 164 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B ARL1P38116 183 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B GLO3P38682 493 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B YMR147WP40218 223 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B YFL034WP43564 1073 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B HOS2P53096 452 aaPredicted RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B CWC24P53769 259 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B YNL260CP53846 198 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B PDR16P53860 351 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B TFB2Q02939 513 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B SGT1Q08446 395 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B LSO1Q3E827 93 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B HMG2P12684 1045 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B PFK2P16862 959 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
YGR038C-BYGR038C-B DPH2P32461 534 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B GCG1P32656 232 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B TFC3P34111 1160 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B EAF5P39995 279 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B UTP25P40498 721 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B YFH7P43591 353 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B MFB1Q04922 465 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B YLR297WQ05899 129 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B CSR1Q06705 408 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B COS7Q07788 383 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B OPI10Q08202 246 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B PSY3Q12318 242 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B RPO41P13433 1351 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B BIO2P32451 375 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B PGM1P33401 570 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B NTR2P36118 322 aaPredicted RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B YGL036WP53185 909 aaPredicted RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B YNR014WP53719 212 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B YNL247WP53852 767 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B NAF1P53919 492 aaKnown RBP2.85□□□□□ -1.95
YGR038C-BYGR038C-B MDM1Q01846 1127 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B YPR078CQ06813 372 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B AAD15Q08361 143 aa2.85□□□□□ -1.95
YGR038C-BYGR038C-B CNS1P33313 385 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B MAL31P38156 614 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B YHL041WP38730 149 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B ETP1P38748 585 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B SAE2P46946 345 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B ART5P53244 586 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B SEC5P89102 971 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B TIF35Q04067 274 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B RRP36Q12481 300 aaPredicted RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B QCR6P00127 147 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B TOM70P07213 617 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B PMS1P14242 873 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B VMA1P17255 1071 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B OSM1P21375 501 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B PDE1P22434 369 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B RDS1P25611 832 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B ELM1P32801 640 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B TYE7P33122 291 aaPredicted RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B MET1P36150 593 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B SAW1P39735 261 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B BST1P43571 1029 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B UTP8P53276 713 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B RKM2Q03942 479 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B TYW1Q08960 810 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B RUP1Q12242 671 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B SPO24Q3E752 67 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B TUS1Q06412 1307 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B WHI2P12611 486 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B SWC3P31376 625 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B PET309P32522 965 aaPredicted RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B SLD2P34252 453 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B RPN10P38886 268 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B VPS41P38959 992 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B SNF7P39929 240 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B CCM1P48237 864 aaPredicted RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B MAL11P53048 616 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B SPP1Q03012 353 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B NHP10Q03435 203 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B RPN9Q04062 393 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B VIP1Q06685 1146 aaKnown RBP2.84□□□□□ -1.95
YGR038C-BYGR038C-B NTO1Q12311 748 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B YSP2Q06681 1438 aa2.84□□□□□ -1.95
YGR038C-BYGR038C-B PRP16P15938 1071 aaPredicted RBP2.84□□□□□ -1.96
YGR038C-BYGR038C-B RPB4P20433 221 aaPredicted RBP2.84□□□□□ -1.96
YGR038C-BYGR038C-B IXR1P33417 597 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B TFA2P36145 328 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B IML2P47031 731 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B NUP84P52891 726 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B YNR061CP53747 219 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B INP2Q03824 705 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B RRN11Q04712 507 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B BNA5Q05979 453 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B SNF1P06782 633 aaKnown RBP2.84□□□□□ -1.96
YGR038C-BYGR038C-B INO1P11986 533 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B URK1P27515 501 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B PSY4P38193 441 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B RCR1P38212 213 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B EXO84P38261 753 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B MTG2P38860 518 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B MOB1P40484 314 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B MAF1P41910 395 aa2.84□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms