RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC55	YGL190C	RSM24	Q03976	319 aa		4.19	□□□□□ -1.74
CDC55	YGL190C	RKM4	Q12504	494 aa		4.19	□□□□□ -1.74
CDC55	YGL190C	HFM1	P51979	1187 aa		4.18	□□□□□ -1.74
CDC55	YGL190C	VPS16	Q03308	798 aa		4.18	□□□□□ -1.74
CDC55	YGL190C	SPP382	Q06411	708 aa	Predicted RBP	4.18	□□□□□ -1.74
CDC55	YGL190C	XYL2	Q07993	356 aa		4.18	□□□□□ -1.74
CDC55	YGL190C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
CDC55	YGL190C	ABD1	P32783	436 aa	Predicted RBP	4.17	□□□□□ -1.74
CDC55	YGL190C	YKL107W	P34251	309 aa		4.17	□□□□□ -1.74
CDC55	YGL190C	GEM1	P39722	662 aa		4.17	□□□□□ -1.74
CDC55	YGL190C	SPT20	P50875	604 aa		4.17	□□□□□ -1.74
CDC55	YGL190C	GDE1	Q02979	1223 aa		4.17	□□□□□ -1.74
CDC55	YGL190C	MSC2	Q03455	724 aa		4.17	□□□□□ -1.74
CDC55	YGL190C	CLU1	Q03690	1277 aa	Known RBP	4.17	□□□□□ -1.74
CDC55	YGL190C	PIN2	Q12057	282 aa		4.17	□□□□□ -1.74
CDC55	YGL190C	APL1	P27351	700 aa		4.16	□□□□□ -1.74
CDC55	YGL190C	HRQ1	Q05549	1077 aa		4.16	□□□□□ -1.74
CDC55	YGL190C	CTS1	P29029	562 aa		4.15	□□□□□ -1.74
CDC55	YGL190C	YKL069W	P36088	180 aa		4.15	□□□□□ -1.74
CDC55	YGL190C	RRT14	P40470	206 aa		4.15	□□□□□ -1.74
CDC55	YGL190C	CDC20	P26309	610 aa		4.14	□□□□□ -1.75
CDC55	YGL190C	DOM34	P33309	386 aa		4.14	□□□□□ -1.75
CDC55	YGL190C	SPO20	Q04359	397 aa		4.14	□□□□□ -1.75
CDC55	YGL190C	KIN2	P13186	1147 aa	Known RBP	4.14	□□□□□ -1.75
CDC55	YGL190C	NPP2	P39997	493 aa		4.14	□□□□□ -1.75
CDC55	YGL190C	GCV2	P49095	1034 aa		4.14	□□□□□ -1.75
CDC55	YGL190C	NOP7	P53261	605 aa	Known RBP	4.14	□□□□□ -1.75
CDC55	YGL190C	VPS62	P53285	467 aa		4.14	□□□□□ -1.75
CDC55	YGL190C	ORC1	P54784	914 aa	Predicted RBP	4.14	□□□□□ -1.75
CDC55	YGL190C	JIP5	Q06214	492 aa	Predicted RBP	4.14	□□□□□ -1.75
CDC55	YGL190C	YLR358C	O13565	187 aa		4.13	□□□□□ -1.75
CDC55	YGL190C	LST4	P34239	828 aa		4.13	□□□□□ -1.75
CDC55	YGL190C	TAT2	P38967	592 aa		4.13	□□□□□ -1.75
CDC55	YGL190C	MBP1	P39678	833 aa		4.13	□□□□□ -1.75
CDC55	YGL190C	GTF1	P53260	183 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC55	YGL190C	YAP6	Q03935	383 aa		4.13	□□□□□ -1.75
CDC55	YGL190C	ACK1	Q07622	623 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC55	YGL190C	YOR352W	Q08816	343 aa		4.13	□□□□□ -1.75
CDC55	YGL190C	GPB1	Q08886	897 aa		4.13	□□□□□ -1.75
CDC55	YGL190C	HMI1	Q12039	706 aa		4.13	□□□□□ -1.75
CDC55	YGL190C	AGP1	P25376	633 aa		4.12	□□□□□ -1.75
CDC55	YGL190C	SHM2	P37291	469 aa	Known RBP	4.12	□□□□□ -1.75
CDC55	YGL190C	GIC1	P38785	314 aa		4.12	□□□□□ -1.75
CDC55	YGL190C	MDM38	Q08179	573 aa		4.12	□□□□□ -1.75
CDC55	YGL190C	FAL1	Q12099	399 aa	Known RBP	4.12	□□□□□ -1.75
CDC55	YGL190C	CLN2	P20438	545 aa		4.11	□□□□□ -1.75
CDC55	YGL190C	YAP1801	P38856	637 aa		4.11	□□□□□ -1.75
CDC55	YGL190C	MND2	P40577	368 aa		4.11	□□□□□ -1.75
CDC55	YGL190C	MAD1	P40957	749 aa		4.11	□□□□□ -1.75
CDC55	YGL190C	SVF1	Q05515	481 aa		4.11	□□□□□ -1.75
CDC55	YGL190C	OPI10	Q08202	246 aa		4.11	□□□□□ -1.75
CDC55	YGL190C	PRI2	P20457	528 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	EMC1	P25574	760 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	SBA1	P28707	216 aa	Known RBP	4.1	□□□□□ -1.75
CDC55	YGL190C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
CDC55	YGL190C	VBA5	P36172	582 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	SRT1	Q03175	343 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	TMA10	Q06177	86 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	RXT3	Q07458	294 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	ADY3	Q07732	790 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	YLL058W	Q12198	575 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	THS1	P04801	734 aa	Known RBP	4.1	□□□□□ -1.75
CDC55	YGL190C	CDC12	P32468	407 aa	Known RBP	4.1	□□□□□ -1.75
CDC55	YGL190C	PAM1	P37304	830 aa	Known RBP	4.1	□□□□□ -1.75
CDC55	YGL190C	YLR224W	Q05947	369 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	TPO1	Q07824	586 aa		4.1	□□□□□ -1.75
CDC55	YGL190C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
CDC55	YGL190C	SNU71	P53207	620 aa	Known RBP	4.09	□□□□□ -1.75
CDC55	YGL190C	CWC24	P53769	259 aa		4.09	□□□□□ -1.75
CDC55	YGL190C	ALD6	P54115	500 aa	Known RBP	4.09	□□□□□ -1.75
CDC55	YGL190C	CDA1	Q06702	301 aa		4.09	□□□□□ -1.75
CDC55	YGL190C	FUN30	P31380	1131 aa		4.08	□□□□□ -1.76
CDC55	YGL190C	ZRG8	P40021	1076 aa		4.08	□□□□□ -1.76
CDC55	YGL190C	PBP1	P53297	722 aa	Known RBP	4.08	□□□□□ -1.76
CDC55	YGL190C	SRP101	P32916	621 aa		4.07	□□□□□ -1.76
CDC55	YGL190C	STE5	P32917	917 aa		4.07	□□□□□ -1.76
CDC55	YGL190C	AFR1	P33304	620 aa		4.07	□□□□□ -1.76
CDC55	YGL190C	ECM21	P38167	1117 aa	Known RBP	4.07	□□□□□ -1.76
CDC55	YGL190C	VAC8	P39968	578 aa		4.07	□□□□□ -1.76
CDC55	YGL190C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
CDC55	YGL190C	SFB2	P53953	876 aa		4.07	□□□□□ -1.76
CDC55	YGL190C	SHE9	Q04172	456 aa		4.07	□□□□□ -1.76
CDC55	YGL190C	NOP12	Q08208	459 aa	Known RBP	4.07	□□□□□ -1.76
CDC55	YGL190C	OSW2	Q12202	724 aa		4.07	□□□□□ -1.76
CDC55	YGL190C	STE11	P23561	717 aa		4.06	□□□□□ -1.76
CDC55	YGL190C	NAP1	P25293	417 aa	Known RBP	4.06	□□□□□ -1.76
CDC55	YGL190C	SAH1	P39954	449 aa	Known RBP	4.06	□□□□□ -1.76
CDC55	YGL190C	MET12	P46151	657 aa		4.06	□□□□□ -1.76
CDC55	YGL190C	URN1	Q06525	465 aa	Known RBP	4.06	□□□□□ -1.76
CDC55	YGL190C	ENA1	P13587	1091 aa		4.06	□□□□□ -1.76
CDC55	YGL190C	NPP1	P25353	742 aa		4.06	□□□□□ -1.76
CDC55	YGL190C	MNN10	P50108	393 aa	Known RBP	4.06	□□□□□ -1.76
CDC55	YGL190C	MCM6	P53091	1017 aa	Known RBP	4.06	□□□□□ -1.76
CDC55	YGL190C	YGR012W	P53206	393 aa		4.06	□□□□□ -1.76
CDC55	YGL190C	ENA2	Q01896	1091 aa		4.06	□□□□□ -1.76
CDC55	YGL190C	DUS3	Q06053	668 aa	Known RBP	4.06	□□□□□ -1.76
CDC55	YGL190C	ENA5	Q12691	1091 aa		4.06	□□□□□ -1.76
CDC55	YGL190C	POA1	P38218	177 aa		4.05	□□□□□ -1.76
CDC55	YGL190C	TSL1	P38427	1098 aa	Known RBP	4.05	□□□□□ -1.76
CDC55	YGL190C	PLB1	P39105	664 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms