RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W SFB3P38810 929 aa6.47□□□□□ -1.37
SPT3YDR392W FMP10P40098 244 aa6.47□□□□□ -1.37
SPT3YDR392W INP52P50942 1183 aa6.47□□□□□ -1.37
SPT3YDR392W CTF4Q01454 927 aa6.47□□□□□ -1.37
SPT3YDR392W TRA1P38811 3744 aa6.46□□□□□ -1.37
SPT3YDR392W RAD53P22216 821 aa6.46□□□□□ -1.38
SPT3YDR392W POT1P27796 417 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
SPT3YDR392W PGM1P33401 570 aaKnown RBP6.46□□□□□ -1.38
SPT3YDR392W GIP1P38229 639 aa6.46□□□□□ -1.38
SPT3YDR392W NOP7P53261 605 aaKnown RBP6.46□□□□□ -1.38
SPT3YDR392W LCD1Q04377 747 aa6.46□□□□□ -1.38
SPT3YDR392W RSC2Q06488 889 aa6.46□□□□□ -1.38
SPT3YDR392W MRP10O75012 95 aa6.45□□□□□ -1.38
SPT3YDR392W CAD1P24813 409 aaKnown RBP6.45□□□□□ -1.38
SPT3YDR392W OMA1P36163 345 aa6.45□□□□□ -1.38
SPT3YDR392W YBR197CP38306 217 aa6.45□□□□□ -1.38
SPT3YDR392W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SPT3YDR392W PUF6Q04373 656 aaKnown RBP6.45□□□□□ -1.38
SPT3YDR392W EMI2Q04409 500 aaKnown RBP6.45□□□□□ -1.38
SPT3YDR392W CCH1P50077 2039 aa6.44□□□□□ -1.38
SPT3YDR392W TY4B-PA0A0B7P3V8 1104 aa6.44□□□□□ -1.38
SPT3YDR392W EUG1P32474 517 aa6.44□□□□□ -1.38
SPT3YDR392W ISW1P38144 1129 aa6.44□□□□□ -1.38
SPT3YDR392W YBR287WP38355 427 aa6.44□□□□□ -1.38
SPT3YDR392W FAA3P39002 694 aa6.44□□□□□ -1.38
SPT3YDR392W NOC2P39744 710 aaKnown RBP6.44□□□□□ -1.38
SPT3YDR392W RPT4P53549 437 aaKnown RBP6.44□□□□□ -1.38
SPT3YDR392W ALE1Q08548 619 aa6.44□□□□□ -1.38
SPT3YDR392W TY4A-HQ6Q5P6 413 aa6.44□□□□□ -1.38
SPT3YDR392W BEM2P39960 2167 aaKnown RBP6.43□□□□□ -1.38
SPT3YDR392W RSC6P25632 483 aa6.43□□□□□ -1.38
SPT3YDR392W GIP2P40036 548 aa6.43□□□□□ -1.38
SPT3YDR392W DMA2P53924 522 aa6.43□□□□□ -1.38
SPT3YDR392W YMR206WQ03695 313 aa6.43□□□□□ -1.38
SPT3YDR392W YUR1P26725 428 aa6.42□□□□□ -1.38
SPT3YDR392W COQ2P32378 372 aa6.42□□□□□ -1.38
SPT3YDR392W PEX2P32800 271 aa6.42□□□□□ -1.38
SPT3YDR392W POA1P38218 177 aa6.42□□□□□ -1.38
SPT3YDR392W RTR1P40084 226 aaPredicted RBP6.42□□□□□ -1.38
SPT3YDR392W MET13P53128 600 aa6.42□□□□□ -1.38
SPT3YDR392W FKS1P38631 1876 aaKnown RBP6.42□□□□□ -1.38
SPT3YDR392W KIP3P53086 805 aaKnown RBP6.41□□□□□ -1.38
SPT3YDR392W DSE4P53753 1117 aa6.41□□□□□ -1.38
SPT3YDR392W HCR1Q05775 265 aaKnown RBP6.41□□□□□ -1.38
SPT3YDR392W BET2P20133 325 aa6.4□□□□□ -1.38
SPT3YDR392W KAE1P36132 386 aa6.4□□□□□ -1.38
SPT3YDR392W ACA1P39970 489 aa6.4□□□□□ -1.38
SPT3YDR392W SKP2P42843 763 aa6.4□□□□□ -1.38
SPT3YDR392W PUN1Q06991 263 aa6.4□□□□□ -1.38
SPT3YDR392W PUP1P25043 261 aa6.39□□□□□ -1.39
SPT3YDR392W ISC10P32645 267 aa6.39□□□□□ -1.39
SPT3YDR392W SPL2P38839 148 aa6.39□□□□□ -1.39
SPT3YDR392W YIL165CP40446 119 aa6.39□□□□□ -1.39
SPT3YDR392W TED1P40533 473 aa6.39□□□□□ -1.39
SPT3YDR392W ENV11P53246 860 aa6.39□□□□□ -1.39
SPT3YDR392W SOK2P53438 785 aaPredicted RBP6.39□□□□□ -1.39
SPT3YDR392W MED7Q08278 222 aa6.39□□□□□ -1.39
SPT3YDR392W PMA1P05030 918 aaKnown RBP6.38□□□□□ -1.39
SPT3YDR392W PUP3P25451 205 aaKnown RBP6.38□□□□□ -1.39
SPT3YDR392W GRX4P32642 244 aa6.38□□□□□ -1.39
SPT3YDR392W TOS4Q06266 489 aa6.38□□□□□ -1.39
SPT3YDR392W MEC1P38111 2368 aa6.38□□□□□ -1.39
SPT3YDR392W MSN1P22148 382 aa6.37□□□□□ -1.39
SPT3YDR392W LEM3P42838 414 aa6.37□□□□□ -1.39
SPT3YDR392W PPT1P53043 513 aa6.37□□□□□ -1.39
SPT3YDR392W YML053CQ04978 212 aa6.37□□□□□ -1.39
SPT3YDR392W PEX19Q07418 342 aa6.37□□□□□ -1.39
SPT3YDR392W KCC4P25389 1037 aa6.36□□□□□ -1.39
SPT3YDR392W SEG2P34250 1132 aa6.36□□□□□ -1.39
SPT3YDR392W TY1A-NL1Q12391 440 aaKnown RBP6.36□□□□□ -1.39
SPT3YDR392W SWI6P09959 803 aa6.35□□□□□ -1.39
SPT3YDR392W MBR1P23493 339 aa6.35□□□□□ -1.39
SPT3YDR392W YKR018CP36114 725 aa6.35□□□□□ -1.39
SPT3YDR392W SAF1P38352 637 aa6.35□□□□□ -1.39
SPT3YDR392W IRC24P40580 263 aa6.35□□□□□ -1.39
SPT3YDR392W SGM1P47166 707 aa6.35□□□□□ -1.39
SPT3YDR392W GUP1P53154 560 aa6.35□□□□□ -1.39
SPT3YDR392W SPO71Q03868 1245 aa6.35□□□□□ -1.39
SPT3YDR392W GYL1Q04322 720 aa6.35□□□□□ -1.39
SPT3YDR392W YLR122CQ12312 125 aa6.35□□□□□ -1.39
SPT3YDR392W RTP1Q12751 981 aa6.35□□□□□ -1.39
SPT3YDR392W STB5P38699 743 aa6.34□□□□□ -1.39
SPT3YDR392W YPT35P38815 214 aaKnown RBP6.34□□□□□ -1.39
SPT3YDR392W INP51P40559 946 aaKnown RBP6.34□□□□□ -1.39
SPT3YDR392W DSD1P53095 428 aa6.34□□□□□ -1.39
SPT3YDR392W MOT1P32333 1867 aa6.34□□□□□ -1.39
SPT3YDR392W SWI1P09547 1314 aa6.33□□□□□ -1.4
SPT3YDR392W TRP3P00937 484 aa6.33□□□□□ -1.4
SPT3YDR392W CHS2P14180 963 aa6.33□□□□□ -1.4
SPT3YDR392W VMA2P16140 517 aaKnown RBP6.33□□□□□ -1.4
SPT3YDR392W ADP1P25371 1049 aa6.33□□□□□ -1.4
SPT3YDR392W HXT8P40886 569 aa6.33□□□□□ -1.4
SPT3YDR392W YGR130CP53278 816 aa6.33□□□□□ -1.4
SPT3YDR392W YGR266WP53326 701 aa6.33□□□□□ -1.4
SPT3YDR392W YAF9P53930 226 aa6.33□□□□□ -1.4
SPT3YDR392W DUS4Q06063 367 aa6.33□□□□□ -1.4
SPT3YDR392W EMG1Q06287 252 aaKnown RBP6.33□□□□□ -1.4
SPT3YDR392W WRS1Q12109 432 aaKnown RBP6.33□□□□□ -1.4
SPT3YDR392W PUF4P25339 888 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
SPT3YDR392W RRN6P32786 894 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms