RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W NUP188P52593 1655 aaKnown RBP1.65□□□□□ -2.15
MSN5YDR335W PHR1P05066 565 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
MSN5YDR335W MPH2P0CD99 609 aa1.64□□□□□ -2.15
MSN5YDR335W SST2P11972 698 aaKnown RBP1.64□□□□□ -2.15
MSN5YDR335W IDI1P15496 288 aa1.64□□□□□ -2.15
MSN5YDR335W RPC31P17890 251 aa1.64□□□□□ -2.15
MSN5YDR335W MRC1P25588 1096 aa1.64□□□□□ -2.15
MSN5YDR335W PRP19P32523 503 aaKnown RBP1.64□□□□□ -2.15
MSN5YDR335W SLN1P39928 1220 aaPredicted RBP1.64□□□□□ -2.15
MSN5YDR335W POL5P39985 1022 aaKnown RBP1.64□□□□□ -2.15
MSN5YDR335W MSN5P52918 1224 aa1.64□□□□□ -2.15
MSN5YDR335W PPT1P53043 513 aa1.64□□□□□ -2.15
MSN5YDR335W YNL034WP53963 612 aa1.64□□□□□ -2.15
MSN5YDR335W YNL018CP53976 612 aa1.64□□□□□ -2.15
MSN5YDR335W UME1Q03010 460 aa1.64□□□□□ -2.15
MSN5YDR335W UTP13Q05946 817 aaKnown RBP1.64□□□□□ -2.15
MSN5YDR335W TRE2Q08693 809 aa1.64□□□□□ -2.15
MSN5YDR335W LSO1Q3E827 93 aa1.64□□□□□ -2.15
MSN5YDR335W STU1P38198 1513 aa1.64□□□□□ -2.15
MSN5YDR335W PGI1P12709 554 aaKnown RBP1.64□□□□□ -2.15
MSN5YDR335W APA1P16550 321 aaKnown RBP1.64□□□□□ -2.15
MSN5YDR335W VBA3P25594 458 aa1.64□□□□□ -2.15
MSN5YDR335W DAL1P32375 460 aa1.64□□□□□ -2.15
MSN5YDR335W TED1P40533 473 aa1.64□□□□□ -2.15
MSN5YDR335W ATP22P50273 684 aaPredicted RBP1.64□□□□□ -2.15
MSN5YDR335W YGR021WP53212 290 aa1.64□□□□□ -2.15
MSN5YDR335W YNR063WP53749 607 aa1.64□□□□□ -2.15
MSN5YDR335W YNL011CP53980 444 aa1.64□□□□□ -2.15
MSN5YDR335W RMD1Q03441 430 aa1.64□□□□□ -2.15
MSN5YDR335W GRC3Q07845 632 aa1.64□□□□□ -2.15
MSN5YDR335W SNU66Q12420 587 aaPredicted RBP1.64□□□□□ -2.15
MSN5YDR335W YPR053CQ6Q5F3 151 aa1.64□□□□□ -2.15
MSN5YDR335W PDR10P51533 1564 aa1.64□□□□□ -2.15
MSN5YDR335W MMS1Q06211 1407 aa1.64□□□□□ -2.15
MSN5YDR335W SPS1P08458 490 aa1.64□□□□□ -2.15
MSN5YDR335W UBP1P25037 809 aa1.64□□□□□ -2.15
MSN5YDR335W PTH2P34222 208 aa1.64□□□□□ -2.15
MSN5YDR335W APL2P36000 726 aaPredicted RBP1.64□□□□□ -2.15
MSN5YDR335W YBR287WP38355 427 aa1.64□□□□□ -2.15
MSN5YDR335W GGA2P38817 585 aaKnown RBP1.64□□□□□ -2.15
MSN5YDR335W RAD55P38953 406 aa1.64□□□□□ -2.15
MSN5YDR335W MNT3P40549 630 aa1.64□□□□□ -2.15
MSN5YDR335W TAF1P46677 1066 aa1.64□□□□□ -2.15
MSN5YDR335W PMT3P47190 753 aa1.64□□□□□ -2.15
MSN5YDR335W SPC105P53148 917 aa1.64□□□□□ -2.15
MSN5YDR335W RSC1P53236 928 aa1.64□□□□□ -2.15
MSN5YDR335W BSC2Q05611 235 aa1.64□□□□□ -2.15
MSN5YDR335W PHM6Q05637 104 aa1.64□□□□□ -2.15
MSN5YDR335W YPR071WQ12346 211 aa1.64□□□□□ -2.15
MSN5YDR335W GLT1Q12680 2145 aaKnown RBP1.64□□□□□ -2.15
MSN5YDR335W GCR1P07261 785 aa1.63□□□□□ -2.15
MSN5YDR335W RGP1P16664 663 aa1.63□□□□□ -2.15
MSN5YDR335W SEC18P18759 758 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W PRP40P33203 583 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W PXA2P34230 853 aa1.63□□□□□ -2.15
MSN5YDR335W YKL133CP36066 463 aa1.63□□□□□ -2.15
MSN5YDR335W KTR4P38131 464 aa1.63□□□□□ -2.15
MSN5YDR335W HIS6P40545 261 aa1.63□□□□□ -2.15
MSN5YDR335W RTA1P53047 317 aa1.63□□□□□ -2.15
MSN5YDR335W ERP6P53198 216 aa1.63□□□□□ -2.15
MSN5YDR335W ESF2P53743 316 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W YDR306CQ06640 478 aa1.63□□□□□ -2.15
MSN5YDR335W TSR2Q06672 205 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W PSK2Q08217 1101 aa1.63□□□□□ -2.15
MSN5YDR335W STF1P01098 86 aa1.63□□□□□ -2.15
MSN5YDR335W HOM3P10869 527 aa1.63□□□□□ -2.15
MSN5YDR335W CDC34P14682 295 aa1.63□□□□□ -2.15
MSN5YDR335W FUR1P18562 216 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W LIP5P32875 414 aa1.63□□□□□ -2.15
MSN5YDR335W STE5P32917 917 aa1.63□□□□□ -2.15
MSN5YDR335W SEA4P38164 1038 aa1.63□□□□□ -2.15
MSN5YDR335W EXO84P38261 753 aa1.63□□□□□ -2.15
MSN5YDR335W VTC2P43585 828 aa1.63□□□□□ -2.15
MSN5YDR335W YFR016CP43597 1233 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W MET14Q02196 202 aa1.63□□□□□ -2.15
MSN5YDR335W VPS30Q02948 557 aa1.63□□□□□ -2.15
MSN5YDR335W SPC19Q03954 165 aa1.63□□□□□ -2.15
MSN5YDR335W HFD1Q04458 532 aa1.63□□□□□ -2.15
MSN5YDR335W ISA1Q07821 250 aaPredicted RBP1.63□□□□□ -2.15
MSN5YDR335W APC11Q12157 165 aa1.63□□□□□ -2.15
MSN5YDR335W KAR2P16474 682 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W NPR1P22211 790 aa1.63□□□□□ -2.15
MSN5YDR335W RPL8BP29453 256 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W CHS3P29465 1165 aa1.63□□□□□ -2.15
MSN5YDR335W VBA5P36172 582 aa1.63□□□□□ -2.15
MSN5YDR335W PAN5P38787 379 aa1.63□□□□□ -2.15
MSN5YDR335W AIM46P38885 310 aa1.63□□□□□ -2.15
MSN5YDR335W MBP1P39678 833 aa1.63□□□□□ -2.15
MSN5YDR335W TMA108P40462 946 aa1.63□□□□□ -2.15
MSN5YDR335W YFL066CP43538 392 aa1.63□□□□□ -2.15
MSN5YDR335W YFL054CP43549 646 aa1.63□□□□□ -2.15
MSN5YDR335W MTR4P47047 1073 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W NCE103P53615 221 aa1.63□□□□□ -2.15
MSN5YDR335W TY1A-DR2Q03964 440 aaKnown RBP1.63□□□□□ -2.15
MSN5YDR335W YCS4Q06156 1176 aa1.63□□□□□ -2.15
MSN5YDR335W NHA1Q99271 985 aa1.63□□□□□ -2.15
MSN5YDR335W FUN30P31380 1131 aa1.62□□□□□ -2.15
MSN5YDR335W AAR2P32357 355 aaPredicted RBP1.62□□□□□ -2.15
MSN5YDR335W DAL3P32459 195 aa1.62□□□□□ -2.15
MSN5YDR335W PGM2P37012 569 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms