RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C HSP60P19882 572 aaKnown RBP6.06□□□□□ -1.44
NUP42YDR192C RET1P22276 1149 aaKnown RBP6.06□□□□□ -1.44
NUP42YDR192C PUF4P25339 888 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
NUP42YDR192C MOT2P34909 587 aaKnown RBP6.06□□□□□ -1.44
NUP42YDR192C RRP14P36080 434 aaKnown RBP6.06□□□□□ -1.44
NUP42YDR192C MSH4P40965 878 aaPredicted RBP6.06□□□□□ -1.44
NUP42YDR192C SBE2P42223 864 aaKnown RBP6.06□□□□□ -1.44
NUP42YDR192C YGL176CP46945 554 aa6.06□□□□□ -1.44
NUP42YDR192C BUD9P53226 547 aa6.06□□□□□ -1.44
NUP42YDR192C YPL062WQ02781 134 aa6.06□□□□□ -1.44
NUP42YDR192C YLR257WQ06146 321 aaKnown RBP6.06□□□□□ -1.44
NUP42YDR192C BUD21Q08492 214 aaPredicted RBP6.06□□□□□ -1.44
NUP42YDR192C THI72Q08579 599 aa6.06□□□□□ -1.44
NUP42YDR192C MLP2P40457 1679 aa6.05□□□□□ -1.44
NUP42YDR192C GAL11P19659 1081 aa6.05□□□□□ -1.44
NUP42YDR192C MLS1P30952 554 aa6.05□□□□□ -1.44
NUP42YDR192C PPG1P32838 368 aa6.05□□□□□ -1.44
NUP42YDR192C GPT2P36148 743 aa6.05□□□□□ -1.44
NUP42YDR192C PBP2P38151 413 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
NUP42YDR192C RPN3P40016 523 aaKnown RBP6.05□□□□□ -1.44
NUP42YDR192C BUD6P41697 788 aa6.05□□□□□ -1.44
NUP42YDR192C ARI1P53111 347 aaKnown RBP6.05□□□□□ -1.44
NUP42YDR192C RNH70P53331 553 aa6.05□□□□□ -1.44
NUP42YDR192C NSG2P53898 299 aa6.05□□□□□ -1.44
NUP42YDR192C TDA6Q06466 467 aa6.05□□□□□ -1.44
NUP42YDR192C FMP25Q08023 583 aa6.05□□□□□ -1.44
NUP42YDR192C FLC1Q08967 793 aa6.05□□□□□ -1.44
NUP42YDR192C DNF3Q12674 1656 aa6.04□□□□□ -1.44
NUP42YDR192C RPL8BP29453 256 aaKnown RBP6.04□□□□□ -1.44
NUP42YDR192C BRN1P38170 754 aa6.04□□□□□ -1.44
NUP42YDR192C HUL4P40985 892 aa6.04□□□□□ -1.44
NUP42YDR192C ALT1P52893 592 aa6.04□□□□□ -1.44
NUP42YDR192C YGR125WP53273 1036 aa6.04□□□□□ -1.44
NUP42YDR192C UTP8P53276 713 aaKnown RBP6.04□□□□□ -1.44
NUP42YDR192C EAF1Q06337 982 aa6.04□□□□□ -1.44
NUP42YDR192C ESC2Q06340 456 aa6.04□□□□□ -1.44
NUP42YDR192C SPP382Q06411 708 aaPredicted RBP6.04□□□□□ -1.44
NUP42YDR192C GIC2Q06648 383 aa6.04□□□□□ -1.44
NUP42YDR192C SPO21Q12411 609 aa6.04□□□□□ -1.44
NUP42YDR192C CIT2P08679 460 aa6.03□□□□□ -1.44
NUP42YDR192C STE5P32917 917 aa6.03□□□□□ -1.44
NUP42YDR192C YHR020WP38708 688 aaKnown RBP6.03□□□□□ -1.44
NUP42YDR192C URN1Q06525 465 aaKnown RBP6.03□□□□□ -1.44
NUP42YDR192C YPL066WQ12194 479 aa6.03□□□□□ -1.44
NUP42YDR192C PHM7Q12252 991 aa6.03□□□□□ -1.44
NUP42YDR192C CIT1P00890 479 aa6.02□□□□□ -1.45
NUP42YDR192C KIP1P28742 1111 aa6.02□□□□□ -1.45
NUP42YDR192C CDC11P32458 415 aa6.02□□□□□ -1.45
NUP42YDR192C PAF1P38351 445 aa6.02□□□□□ -1.45
NUP42YDR192C FPR3P38911 411 aaKnown RBP6.02□□□□□ -1.45
NUP42YDR192C YFL066CP43538 392 aa6.02□□□□□ -1.45
NUP42YDR192C PFD1P46988 109 aa6.02□□□□□ -1.45
NUP42YDR192C YOR059CQ08448 450 aaKnown RBP6.02□□□□□ -1.45
NUP42YDR192C YLR125WQ12138 136 aa6.02□□□□□ -1.45
NUP42YDR192C USO1P25386 1790 aa6.02□□□□□ -1.45
NUP42YDR192C PDR10P51533 1564 aa6.01□□□□□ -1.45
NUP42YDR192C SRB8P25648 1427 aa6.01□□□□□ -1.45
NUP42YDR192C RPS4AP0CX35 261 aaKnown RBP6.01□□□□□ -1.45
NUP42YDR192C RPS4BP0CX36 261 aaKnown RBP6.01□□□□□ -1.45
NUP42YDR192C ARE1P25628 610 aa6.01□□□□□ -1.45
NUP42YDR192C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
NUP42YDR192C YMR187CQ03236 431 aa6.01□□□□□ -1.45
NUP42YDR192C TPP1Q03796 238 aa6.01□□□□□ -1.45
NUP42YDR192C GAS5Q08193 484 aa6.01□□□□□ -1.45
NUP42YDR192C NUP157P40064 1391 aaKnown RBP6.01□□□□□ -1.45
NUP42YDR192C COQ4O13525 335 aa6□□□□□ -1.45
NUP42YDR192C THS1P04801 734 aaKnown RBP6□□□□□ -1.45
NUP42YDR192C RSP5P39940 809 aaKnown RBP6□□□□□ -1.45
NUP42YDR192C TNA1P53322 534 aa6□□□□□ -1.45
NUP42YDR192C HOS3Q02959 697 aaKnown RBP6□□□□□ -1.45
NUP42YDR192C YDL124WQ07551 312 aaKnown RBP6□□□□□ -1.45
NUP42YDR192C PPM2Q08282 695 aa6□□□□□ -1.45
NUP42YDR192C PUS7Q08647 676 aaKnown RBP6□□□□□ -1.45
NUP42YDR192C YPR053CQ6Q5F3 151 aa6□□□□□ -1.45
NUP42YDR192C BUD3P25558 1636 aa5.99□□□□□ -1.45
NUP42YDR192C YER152CP10356 443 aa5.99□□□□□ -1.45
NUP42YDR192C TAT1P38085 619 aa5.99□□□□□ -1.45
NUP42YDR192C PNT1P38969 423 aa5.99□□□□□ -1.45
NUP42YDR192C GEM1P39722 662 aa5.99□□□□□ -1.45
NUP42YDR192C NUP82P40368 713 aa5.99□□□□□ -1.45
NUP42YDR192C MMM1P41800 426 aa5.99□□□□□ -1.45
NUP42YDR192C ALR2P43553 858 aa5.99□□□□□ -1.45
NUP42YDR192C YJL045WP47052 634 aa5.99□□□□□ -1.45
NUP42YDR192C ALG12P53730 551 aa5.99□□□□□ -1.45
NUP42YDR192C SRP1Q02821 542 aaKnown RBP5.99□□□□□ -1.45
NUP42YDR192C PDR12Q02785 1511 aa5.99□□□□□ -1.45
NUP42YDR192C RPL11AP0C0W9 174 aaKnown RBP5.98□□□□□ -1.45
NUP42YDR192C PHO8P11491 566 aa5.98□□□□□ -1.45
NUP42YDR192C YSC84P32793 468 aa5.98□□□□□ -1.45
NUP42YDR192C SPC42P36094 363 aa5.98□□□□□ -1.45
NUP42YDR192C CCZ1P38273 704 aa5.98□□□□□ -1.45
NUP42YDR192C MBP1P39678 833 aa5.98□□□□□ -1.45
NUP42YDR192C SIP5P40210 489 aaKnown RBP5.98□□□□□ -1.45
NUP42YDR192C CIT3P43635 486 aa5.98□□□□□ -1.45
NUP42YDR192C POB3Q04636 552 aaKnown RBP5.98□□□□□ -1.45
NUP42YDR192C ACM1Q08981 209 aa5.98□□□□□ -1.45
NUP42YDR192C YDR215CQ12240 137 aa5.98□□□□□ -1.45
NUP42YDR192C NSI1Q12457 570 aa5.98□□□□□ -1.45
NUP42YDR192C RPL11BQ3E757 174 aaPredicted RBP5.98□□□□□ -1.45
NUP42YDR192C ARO1P08566 1588 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms