RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C RRT14P40470 206 aa1.51□□□□□ -2.17
SEC1YDR164C CHA4P43634 648 aa1.51□□□□□ -2.17
SEC1YDR164C ENT3P47160 408 aa1.51□□□□□ -2.17
SEC1YDR164C PSP2P50109 593 aaKnown RBP1.51□□□□□ -2.17
SEC1YDR164C RAT1Q02792 1006 aaKnown RBP1.51□□□□□ -2.17
SEC1YDR164C MUK1Q02866 612 aa1.51□□□□□ -2.17
SEC1YDR164C LAS17Q12446 633 aa1.51□□□□□ -2.17
SEC1YDR164C TMT1P32643 299 aa1.51□□□□□ -2.17
SEC1YDR164C KTR4P38131 464 aa1.51□□□□□ -2.17
SEC1YDR164C ENB1Q08299 606 aa1.51□□□□□ -2.17
SEC1YDR164C BAS1P22035 811 aa1.5□□□□□ -2.17
SEC1YDR164C CAD1P24813 409 aaKnown RBP1.5□□□□□ -2.17
SEC1YDR164C NUT2Q06213 157 aa1.5□□□□□ -2.17
SEC1YDR164C NPC2Q12408 173 aa1.5□□□□□ -2.17
SEC1YDR164C TRL1P09880 827 aaKnown RBP1.49□□□□□ -2.17
SEC1YDR164C ACE2P21192 770 aa1.49□□□□□ -2.17
SEC1YDR164C ERG4P25340 473 aa1.49□□□□□ -2.17
SEC1YDR164C CDC3P32457 520 aaKnown RBP1.49□□□□□ -2.17
SEC1YDR164C PPZ2P33329 710 aa1.49□□□□□ -2.17
SEC1YDR164C BUL1P48524 976 aa1.49□□□□□ -2.17
SEC1YDR164C SEC5P89102 971 aa1.49□□□□□ -2.17
SEC1YDR164C BNR1P40450 1375 aa1.49□□□□□ -2.17
SEC1YDR164C ATG19P35193 415 aa1.49□□□□□ -2.17
SEC1YDR164C GLO1P50107 326 aa1.49□□□□□ -2.17
SEC1YDR164C HFM1P51979 1187 aa1.49□□□□□ -2.17
SEC1YDR164C ROD1Q02805 837 aa1.49□□□□□ -2.17
SEC1YDR164C YPL109CQ02981 657 aa1.49□□□□□ -2.17
SEC1YDR164C OSW2Q12202 724 aa1.49□□□□□ -2.17
SEC1YDR164C YBL113CQ7M4S9 792 aa1.49□□□□□ -2.17
SEC1YDR164C KAR4P25583 335 aa1.48□□□□□ -2.17
SEC1YDR164C MLS1P30952 554 aa1.48□□□□□ -2.17
SEC1YDR164C UGA2P38067 497 aa1.48□□□□□ -2.17
SEC1YDR164C ERP5P38819 212 aa1.48□□□□□ -2.17
SEC1YDR164C GEM1P39722 662 aa1.48□□□□□ -2.17
SEC1YDR164C MDJ2P42834 146 aa1.48□□□□□ -2.17
SEC1YDR164C IMO32P53219 342 aa1.48□□□□□ -2.17
SEC1YDR164C HBT1Q07653 1046 aaKnown RBP1.48□□□□□ -2.17
SEC1YDR164C GUP2Q08929 609 aa1.48□□□□□ -2.17
SEC1YDR164C MCD1Q12158 566 aa1.48□□□□□ -2.17
SEC1YDR164C BI4P03879 638 aa1.48□□□□□ -2.17
SEC1YDR164C SYP1P25623 870 aaKnown RBP1.48□□□□□ -2.17
SEC1YDR164C CCC2P38995 1004 aa1.48□□□□□ -2.17
SEC1YDR164C MRPS18P42847 217 aa1.48□□□□□ -2.17
SEC1YDR164C CNN1P43618 361 aa1.48□□□□□ -2.17
SEC1YDR164C RNT1Q02555 471 aa1.48□□□□□ -2.17
SEC1YDR164C TOS4Q06266 489 aa1.48□□□□□ -2.17
SEC1YDR164C XYL2Q07993 356 aa1.48□□□□□ -2.17
SEC1YDR164C ACM1Q08981 209 aa1.48□□□□□ -2.17
SEC1YDR164C MXR1P40029 184 aa1.47□□□□□ -2.17
SEC1YDR164C SCS3P53012 380 aa1.47□□□□□ -2.17
SEC1YDR164C SIW14P53965 281 aa1.47□□□□□ -2.17
SEC1YDR164C RAD27P26793 382 aa1.47□□□□□ -2.17
SEC1YDR164C MKK2P32491 506 aa1.47□□□□□ -2.17
SEC1YDR164C GEF1P37020 779 aa1.47□□□□□ -2.17
SEC1YDR164C RIX1P38883 763 aaPredicted RBP1.47□□□□□ -2.17
SEC1YDR164C SDS3P40505 327 aa1.47□□□□□ -2.17
SEC1YDR164C DAS1P47005 663 aa1.47□□□□□ -2.17
SEC1YDR164C YGR012WP53206 393 aa1.47□□□□□ -2.17
SEC1YDR164C COQ11Q05892 277 aa1.47□□□□□ -2.17
SEC1YDR164C MRH1Q12117 320 aaPredicted RBP1.47□□□□□ -2.17
SEC1YDR164C YNL162W-AQ3E7A8 72 aa1.47□□□□□ -2.17
SEC1YDR164C PHO4P07270 312 aaKnown RBP1.46□□□□□ -2.18
SEC1YDR164C PPR1P07272 904 aaPredicted RBP1.46□□□□□ -2.18
SEC1YDR164C ALG7P07286 448 aa1.46□□□□□ -2.18
SEC1YDR164C SPE1P08432 466 aa1.46□□□□□ -2.18
SEC1YDR164C SSA1P10591 642 aaKnown RBP1.46□□□□□ -2.18
SEC1YDR164C HSF1P10961 833 aa1.46□□□□□ -2.18
SEC1YDR164C DBP5P20449 482 aaKnown RBP1.46□□□□□ -2.18
SEC1YDR164C ILV6P25605 309 aaKnown RBP1.46□□□□□ -2.18
SEC1YDR164C SEC8P32855 1065 aa1.46□□□□□ -2.18
SEC1YDR164C SNF7P39929 240 aaKnown RBP1.46□□□□□ -2.18
SEC1YDR164C PIC2P40035 300 aa1.46□□□□□ -2.18
SEC1YDR164C THI7Q05998 598 aa1.46□□□□□ -2.18
SEC1YDR164C SPP382Q06411 708 aaPredicted RBP1.46□□□□□ -2.18
SEC1YDR164C GNT1Q12096 491 aa1.46□□□□□ -2.18
SEC1YDR164C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
SEC1YDR164C SUT2Q12286 268 aa1.46□□□□□ -2.18
SEC1YDR164C TUB1P09733 447 aaKnown RBP1.45□□□□□ -2.18
SEC1YDR164C GFA1P14742 717 aaKnown RBP1.45□□□□□ -2.18
SEC1YDR164C CDC43P18898 376 aa1.45□□□□□ -2.18
SEC1YDR164C SRP101P32916 621 aa1.45□□□□□ -2.18
SEC1YDR164C TDP1P38319 544 aa1.45□□□□□ -2.18
SEC1YDR164C FAA3P39002 694 aa1.45□□□□□ -2.18
SEC1YDR164C THI12P42883 340 aa1.45□□□□□ -2.18
SEC1YDR164C THI5P43534 340 aa1.45□□□□□ -2.18
SEC1YDR164C THI11P47183 340 aa1.45□□□□□ -2.18
SEC1YDR164C NCS6P53088 359 aa1.45□□□□□ -2.18
SEC1YDR164C TAF7Q05021 590 aa1.45□□□□□ -2.18
SEC1YDR164C THI13Q07748 340 aa1.45□□□□□ -2.18
SEC1YDR164C HAT1Q12341 374 aa1.45□□□□□ -2.18
SEC1YDR164C TRM13Q12383 476 aa1.45□□□□□ -2.18
SEC1YDR164C RLF2Q12495 606 aa1.45□□□□□ -2.18
SEC1YDR164C HCA4P20448 770 aaKnown RBP1.45□□□□□ -2.18
SEC1YDR164C MCM7P38132 845 aa1.45□□□□□ -2.18
SEC1YDR164C WHI4Q07655 649 aaKnown RBP1.45□□□□□ -2.18
SEC1YDR164C TRP4P07285 380 aaPredicted RBP1.44□□□□□ -2.18
SEC1YDR164C YHL050CP38721 697 aa1.44□□□□□ -2.18
SEC1YDR164C YAP1801P38856 637 aa1.44□□□□□ -2.18
SEC1YDR164C YHR219WP38900 624 aa1.44□□□□□ -2.18
SEC1YDR164C CDA1Q06702 301 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms