RNA–Protein interactions for RNA: YBR274W

CHK1, Transcript of Serine/threonine kinase and DNA damage checkpoint effector, yeast

Gene CHK1, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHK1	YBR274W	SPR28	Q04921	423 aa		4.96	□□□□□ -1.62
CHK1	YBR274W	ESF1	Q06344	628 aa	Known RBP	4.96	□□□□□ -1.62
CHK1	YBR274W	NUP192	P47054	1683 aa		4.96	□□□□□ -1.62
CHK1	YBR274W	SEC8	P32855	1065 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	POL12	P38121	705 aa	Predicted RBP	4.95	□□□□□ -1.62
CHK1	YBR274W	PTC7	P38797	343 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	PEX7	P39108	375 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	HDA2	Q06629	674 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	MRL1	Q06815	381 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	HSP78	P33416	811 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	FYV10	P40492	516 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	ENT3	P47160	408 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	PTC5	Q12511	572 aa		4.95	□□□□□ -1.62
CHK1	YBR274W	RTC1	Q08281	1341 aa		4.94	□□□□□ -1.62
CHK1	YBR274W	MDL2	P33311	773 aa		4.94	□□□□□ -1.62
CHK1	YBR274W	SEA4	P38164	1038 aa		4.94	□□□□□ -1.62
CHK1	YBR274W	PAF1	P38351	445 aa		4.94	□□□□□ -1.62
CHK1	YBR274W	YJL045W	P47052	634 aa		4.94	□□□□□ -1.62
CHK1	YBR274W	ECL1	P48235	211 aa		4.94	□□□□□ -1.62
CHK1	YBR274W	SIW14	P53965	281 aa		4.94	□□□□□ -1.62
CHK1	YBR274W	RMD1	Q03441	430 aa		4.94	□□□□□ -1.62
CHK1	YBR274W	GTS1	P40956	396 aa		4.93	□□□□□ -1.62
CHK1	YBR274W	OYE2	Q03558	400 aa	Known RBP	4.93	□□□□□ -1.62
CHK1	YBR274W	DFG16	Q99234	619 aa		4.93	□□□□□ -1.62
CHK1	YBR274W	RAD9	P14737	1309 aa		4.92	□□□□□ -1.62
CHK1	YBR274W	AFG2	P32794	780 aa		4.92	□□□□□ -1.62
CHK1	YBR274W	ALG3	P38179	458 aa		4.92	□□□□□ -1.62
CHK1	YBR274W	ORC3	P54790	616 aa		4.92	□□□□□ -1.62
CHK1	YBR274W	NBA1	Q08229	501 aa	Known RBP	4.92	□□□□□ -1.62
CHK1	YBR274W	SAM35	P14693	329 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	SRO9	P25567	434 aa	Known RBP	4.91	□□□□□ -1.62
CHK1	YBR274W	RAD27	P26793	382 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	KIP1	P28742	1111 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	YSC84	P32793	468 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	IRC24	P40580	263 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	FOL2	P51601	243 aa	Known RBP	4.91	□□□□□ -1.62
CHK1	YBR274W	ROD1	Q02805	837 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	COQ4	O13525	335 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	GCR1	P07261	785 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	MKK2	P32491	506 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	LRG1	P35688	1017 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
CHK1	YBR274W	YPL260W	Q08977	551 aa		4.91	□□□□□ -1.62
CHK1	YBR274W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.91	□□□□□ -1.62
CHK1	YBR274W	ELM1	P32801	640 aa		4.9	□□□□□ -1.63
CHK1	YBR274W	CCZ1	P38273	704 aa		4.9	□□□□□ -1.63
CHK1	YBR274W	RAT1	Q02792	1006 aa	Known RBP	4.9	□□□□□ -1.63
CHK1	YBR274W	AOS1	Q06624	347 aa		4.9	□□□□□ -1.63
CHK1	YBR274W	LPX1	Q12405	387 aa	Known RBP	4.9	□□□□□ -1.63
CHK1	YBR274W	SYP1	P25623	870 aa	Known RBP	4.89	□□□□□ -1.63
CHK1	YBR274W	AIM26	P32858	118 aa		4.89	□□□□□ -1.63
CHK1	YBR274W	PET112	P33893	541 aa		4.89	□□□□□ -1.63
CHK1	YBR274W	SEG2	P34250	1132 aa		4.89	□□□□□ -1.63
CHK1	YBR274W	PRP43	P53131	767 aa	Known RBP	4.89	□□□□□ -1.63
CHK1	YBR274W	HOS3	Q02959	697 aa	Known RBP	4.89	□□□□□ -1.63
CHK1	YBR274W	RTT10	Q08924	1013 aa		4.89	□□□□□ -1.63
CHK1	YBR274W	TMA46	Q12000	345 aa	Known RBP	4.89	□□□□□ -1.63
CHK1	YBR274W	GPB2	P39717	880 aa		4.88	□□□□□ -1.63
CHK1	YBR274W	NOP7	P53261	605 aa	Known RBP	4.88	□□□□□ -1.63
CHK1	YBR274W	TNA1	P53322	534 aa		4.88	□□□□□ -1.63
CHK1	YBR274W	SPO21	Q12411	609 aa		4.88	□□□□□ -1.63
CHK1	YBR274W	RGD1	P38339	666 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	HXT13	P39924	564 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	RPN3	P40016	523 aa	Known RBP	4.87	□□□□□ -1.63
CHK1	YBR274W	CNN1	P43618	361 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	GNP1	P48813	663 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	HXT17	P53631	564 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	HXT15	P54854	567 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	RSC58	Q07979	502 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
CHK1	YBR274W	NIT1	P40447	199 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	RSB1	Q08417	382 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	ENT1	Q12518	454 aa		4.87	□□□□□ -1.63
CHK1	YBR274W	SPS1	P08458	490 aa		4.86	□□□□□ -1.63
CHK1	YBR274W	DBP5	P20449	482 aa	Known RBP	4.86	□□□□□ -1.63
CHK1	YBR274W	GAS1	P22146	559 aa	Known RBP	4.86	□□□□□ -1.63
CHK1	YBR274W	MNR2	P35724	969 aa		4.86	□□□□□ -1.63
CHK1	YBR274W	YRF1-2	P40105	1681 aa		4.86	□□□□□ -1.63
CHK1	YBR274W	RRP5	Q05022	1729 aa	Known RBP	4.85	□□□□□ -1.63
CHK1	YBR274W	RNQ1	P25367	405 aa		4.85	□□□□□ -1.63
CHK1	YBR274W	RER2	P35196	286 aa		4.85	□□□□□ -1.63
CHK1	YBR274W	BAP2	P38084	609 aa		4.85	□□□□□ -1.63
CHK1	YBR274W	ENV11	P53246	860 aa		4.85	□□□□□ -1.63
CHK1	YBR274W	MLS1	P30952	554 aa		4.84	□□□□□ -1.63
CHK1	YBR274W	MCM7	P38132	845 aa		4.84	□□□□□ -1.63
CHK1	YBR274W	PIK1	P39104	1066 aa		4.84	□□□□□ -1.63
CHK1	YBR274W	HNT2	P49775	206 aa		4.84	□□□□□ -1.63
CHK1	YBR274W	IMH1	Q06704	911 aa	Known RBP	4.84	□□□□□ -1.63
CHK1	YBR274W	RCL1	Q08096	367 aa	Predicted RBP	4.84	□□□□□ -1.63
CHK1	YBR274W	CDC34	P14682	295 aa		4.83	□□□□□ -1.64
CHK1	YBR274W	ESL2	P36168	1195 aa		4.83	□□□□□ -1.64
CHK1	YBR274W	ETP1	P38748	585 aa	Known RBP	4.83	□□□□□ -1.64
CHK1	YBR274W	SNO2	P53823	222 aa		4.82	□□□□□ -1.64
CHK1	YBR274W	MRPL22	P53881	309 aa		4.82	□□□□□ -1.64
CHK1	YBR274W	TAF8	Q03750	510 aa		4.82	□□□□□ -1.64
CHK1	YBR274W	TIF35	Q04067	274 aa	Known RBP	4.82	□□□□□ -1.64
CHK1	YBR274W	YOR352W	Q08816	343 aa		4.82	□□□□□ -1.64
CHK1	YBR274W	YER152C	P10356	443 aa		4.82	□□□□□ -1.64
CHK1	YBR274W	PRP45	P28004	379 aa	Predicted RBP	4.82	□□□□□ -1.64
CHK1	YBR274W	UBP5	P39944	805 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms