RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	SPP382	Q06411	708 aa	Predicted RBP	11.54	□□□□□ -0.56
GDH3	YAL062W	SRD1	P09007	221 aa		11.53	□□□□□ -0.56
GDH3	YAL062W	PRP22	P24384	1145 aa	Known RBP	11.53	□□□□□ -0.56
GDH3	YAL062W	REG2	P38232	338 aa		11.53	□□□□□ -0.56
GDH3	YAL062W	PIH1	P38768	344 aa		11.53	□□□□□ -0.56
GDH3	YAL062W	HUL5	P53119	910 aa		11.53	□□□□□ -0.56
GDH3	YAL062W	ZPR1	P53303	486 aa	Known RBP	11.53	□□□□□ -0.56
GDH3	YAL062W	SLD5	Q03406	294 aa		11.53	□□□□□ -0.56
GDH3	YAL062W	TMA16	Q08687	178 aa		11.53	□□□□□ -0.56
GDH3	YAL062W	PFK1	P16861	987 aa	Known RBP	11.52	□□□□□ -0.57
GDH3	YAL062W	HMF1	P40037	129 aa	Known RBP	11.52	□□□□□ -0.57
GDH3	YAL062W	FIS1	P40515	155 aa		11.52	□□□□□ -0.57
GDH3	YAL062W	TCB2	P48231	1178 aa		11.52	□□□□□ -0.57
GDH3	YAL062W	LSC2	P53312	427 aa		11.52	□□□□□ -0.57
GDH3	YAL062W	EBS1	Q03466	884 aa	Known RBP	11.52	□□□□□ -0.57
GDH3	YAL062W	DUS4	Q06063	367 aa		11.52	□□□□□ -0.57
GDH3	YAL062W	CDC37	P06101	506 aa	Known RBP	11.51	□□□□□ -0.57
GDH3	YAL062W	YKL091C	P33324	310 aa	Known RBP	11.51	□□□□□ -0.57
GDH3	YAL062W	PPS1	P38148	807 aa		11.51	□□□□□ -0.57
GDH3	YAL062W	ULP2	P40537	1034 aa	Predicted RBP	11.51	□□□□□ -0.57
GDH3	YAL062W	AIP1	P46680	615 aa	Known RBP	11.51	□□□□□ -0.57
GDH3	YAL062W	UBP15	P50101	1230 aa		11.51	□□□□□ -0.57
GDH3	YAL062W	YGL039W	P53183	348 aa	Known RBP	11.51	□□□□□ -0.57
GDH3	YAL062W	CRD1	Q07560	283 aa		11.51	□□□□□ -0.57
GDH3	YAL062W	TIF6	Q12522	245 aa	Known RBP	11.51	□□□□□ -0.57
GDH3	YAL062W	MRC1	P25588	1096 aa		11.5	□□□□□ -0.57
GDH3	YAL062W	PSO2	P30620	661 aa		11.5	□□□□□ -0.57
GDH3	YAL062W	TFC4	P33339	1025 aa		11.5	□□□□□ -0.57
GDH3	YAL062W	DBP7	P36120	742 aa	Known RBP	11.5	□□□□□ -0.57
GDH3	YAL062W	YET1	P35723	206 aa		11.49	□□□□□ -0.57
GDH3	YAL062W	SAP190	P36123	1033 aa		11.49	□□□□□ -0.57
GDH3	YAL062W	TVP38	P36164	337 aa		11.49	□□□□□ -0.57
GDH3	YAL062W	RPN3	P40016	523 aa	Known RBP	11.49	□□□□□ -0.57
GDH3	YAL062W	HUL4	P40985	892 aa		11.49	□□□□□ -0.57
GDH3	YAL062W	YFL034W	P43564	1073 aa		11.49	□□□□□ -0.57
GDH3	YAL062W	YOL075C	Q08234	1294 aa		11.49	□□□□□ -0.57
GDH3	YAL062W	CTM1	P38818	585 aa		11.48	□□□□□ -0.57
GDH3	YAL062W	MGA2	P40578	1113 aa		11.48	□□□□□ -0.57
GDH3	YAL062W	YDL057W	Q07379	328 aa		11.48	□□□□□ -0.57
GDH3	YAL062W	TCO89	Q08921	799 aa		11.48	□□□□□ -0.57
GDH3	YAL062W	MAK16	P10962	306 aa	Predicted RBP	11.47	□□□□□ -0.57
GDH3	YAL062W	TCP1	P12612	559 aa	Known RBP	11.47	□□□□□ -0.57
GDH3	YAL062W	OM45	P16547	393 aa		11.47	□□□□□ -0.57
GDH3	YAL062W	PXL1	P36166	706 aa		11.47	□□□□□ -0.57
GDH3	YAL062W	MXR1	P40029	184 aa		11.47	□□□□□ -0.57
GDH3	YAL062W	ATG1	P53104	897 aa		11.47	□□□□□ -0.57
GDH3	YAL062W	YLR225C	Q05948	407 aa	Known RBP	11.47	□□□□□ -0.57
GDH3	YAL062W	MSC6	Q08818	692 aa	Known RBP	11.47	□□□□□ -0.57
GDH3	YAL062W	YPL277C	Q08989	487 aa		11.47	□□□□□ -0.57
GDH3	YAL062W	PCK1	P10963	549 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	CYC8	P14922	966 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	RGT1	P32862	1170 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	PGM2	P37012	569 aa	Known RBP	11.46	□□□□□ -0.57
GDH3	YAL062W	VID30	P53076	958 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	VPS75	P53853	264 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	YMR321C	Q04898	105 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	SVF1	Q05515	481 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	COG4	Q06096	861 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	CUR1	Q06469	252 aa		11.46	□□□□□ -0.57
GDH3	YAL062W	FKS1	P38631	1876 aa	Known RBP	11.46	□□□□□ -0.58
GDH3	YAL062W	PHO13	P19881	312 aa		11.45	□□□□□ -0.58
GDH3	YAL062W	MSH3	P25336	1018 aa		11.45	□□□□□ -0.58
GDH3	YAL062W	BIM1	P40013	344 aa		11.45	□□□□□ -0.58
GDH3	YAL062W	FYV8	P46949	817 aa	Known RBP	11.45	□□□□□ -0.58
GDH3	YAL062W	NBP1	P52919	319 aa	Predicted RBP	11.45	□□□□□ -0.58
GDH3	YAL062W	NCS2	P53923	493 aa	Predicted RBP	11.45	□□□□□ -0.58
GDH3	YAL062W	ARK1	P53974	638 aa		11.45	□□□□□ -0.58
GDH3	YAL062W	YAP7	Q08182	245 aa		11.45	□□□□□ -0.58
GDH3	YAL062W	YPL216W	Q08964	1102 aa		11.45	□□□□□ -0.58
GDH3	YAL062W	TRM11	Q12463	433 aa		11.45	□□□□□ -0.58
GDH3	YAL062W	PDC1	P06169	563 aa	Known RBP	11.44	□□□□□ -0.58
GDH3	YAL062W	DAL7	P21826	554 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	SPO11	P23179	398 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	YUR1	P26725	428 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	UBP13	P38187	747 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	MIP6	P38760	659 aa	Known RBP	11.44	□□□□□ -0.58
GDH3	YAL062W	SPT8	P38915	602 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	YEL025C	P39991	1188 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	TOS3	P43637	560 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	VPS53	P47061	822 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	MED1	Q12321	566 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	SRF1	Q12516	437 aa		11.44	□□□□□ -0.58
GDH3	YAL062W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.43	□□□□□ -0.58	not detected
GDH3	YAL062W	CDC48	P25694	835 aa	Known RBP	11.43	□□□□□ -0.58
GDH3	YAL062W	MRF1	P30775	413 aa	Predicted RBP	11.43	□□□□□ -0.58
GDH3	YAL062W	ATG19	P35193	415 aa		11.43	□□□□□ -0.58
GDH3	YAL062W	TOF1	P53840	1238 aa		11.43	□□□□□ -0.58
GDH3	YAL062W	SMC5	Q08204	1093 aa		11.43	□□□□□ -0.58
GDH3	YAL062W	DBP5	P20449	482 aa	Known RBP	11.42	□□□□□ -0.58
GDH3	YAL062W	TRK2	P28584	889 aa		11.42	□□□□□ -0.58
GDH3	YAL062W	TIM23	P32897	222 aa		11.42	□□□□□ -0.58
GDH3	YAL062W	SHM1	P37292	490 aa	Predicted RBP	11.42	□□□□□ -0.58
GDH3	YAL062W	UBP5	P39944	805 aa		11.42	□□□□□ -0.58
GDH3	YAL062W	STR2	P47164	639 aa		11.42	□□□□□ -0.58
GDH3	YAL062W	MDR1	P53258	950 aa		11.42	□□□□□ -0.58
GDH3	YAL062W	ROD1	Q02805	837 aa		11.42	□□□□□ -0.58
GDH3	YAL062W	MET7	Q08645	548 aa		11.42	□□□□□ -0.58
GDH3	YAL062W	RPS6A	P0CX37	236 aa	Known RBP	11.41	□□□□□ -0.58
GDH3	YAL062W	RPS6B	P0CX38	236 aa	Predicted RBP	11.41	□□□□□ -0.58
GDH3	YAL062W	RPC53	P25441	422 aa		11.41	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms