RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C VPS27P40343 622 aaKnown RBP2.84□□□□□ -1.96
CLN3YAL040C EAR1Q03212 550 aa2.84□□□□□ -1.96
CLN3YAL040C CDA2Q06703 312 aa2.84□□□□□ -1.96
CLN3YAL040C INP54Q08227 384 aaKnown RBP2.84□□□□□ -1.96
CLN3YAL040C SLM3Q12093 417 aa2.84□□□□□ -1.96
CLN3YAL040C TY1A-LR4P0C2I8 440 aaKnown RBP2.83□□□□□ -1.96
CLN3YAL040C TY1A-DR6P0CX70 440 aa2.83□□□□□ -1.96
CLN3YAL040C TY1A-ER1P0CX71 440 aa2.83□□□□□ -1.96
CLN3YAL040C TY1A-LR2P0CX72 440 aa2.83□□□□□ -1.96
CLN3YAL040C TY1A-PLP0CX73 440 aa2.83□□□□□ -1.96
CLN3YAL040C TY1A-JR1P0CX74 440 aa2.83□□□□□ -1.96
CLN3YAL040C TY1A-LR3P0CX75 440 aa2.83□□□□□ -1.96
CLN3YAL040C TY1A-ML2P0CX76 440 aa2.83□□□□□ -1.96
CLN3YAL040C YCR015CP25616 317 aa2.83□□□□□ -1.96
CLN3YAL040C HSP104P31539 908 aaKnown RBP2.83□□□□□ -1.96
CLN3YAL040C CIC1P38779 376 aaKnown RBP2.83□□□□□ -1.96
CLN3YAL040C PEX7P39108 375 aa2.83□□□□□ -1.96
CLN3YAL040C NOP2P40991 618 aaKnown RBP2.83□□□□□ -1.96
CLN3YAL040C SAM37P50110 327 aa2.83□□□□□ -1.96
CLN3YAL040C MON1P53129 644 aa2.83□□□□□ -1.96
CLN3YAL040C SUB1P54000 292 aaKnown RBP2.83□□□□□ -1.96
CLN3YAL040C NOC3Q07896 663 aaPredicted RBP2.83□□□□□ -1.96
CLN3YAL040C CDC45Q08032 650 aa2.83□□□□□ -1.96
CLN3YAL040C MSC6Q08818 692 aaKnown RBP2.83□□□□□ -1.96
CLN3YAL040C TY1A-GR1Q12085 440 aa2.83□□□□□ -1.96
CLN3YAL040C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.83□□□□□ -1.96
CLN3YAL040C TY1A-OLQ92392 440 aaKnown RBP2.83□□□□□ -1.96
CLN3YAL040C UTP10P42945 1769 aaKnown RBP2.82□□□□□ -1.96
CLN3YAL040C RSF2P46974 1380 aa2.82□□□□□ -1.96
CLN3YAL040C RPP0P05317 312 aaKnown RBP2.82□□□□□ -1.96
CLN3YAL040C TRL1P09880 827 aaKnown RBP2.82□□□□□ -1.96
CLN3YAL040C XKS1P42826 600 aa2.82□□□□□ -1.96
CLN3YAL040C DSD1P53095 428 aa2.82□□□□□ -1.96
CLN3YAL040C RTS3P53289 263 aa2.82□□□□□ -1.96
CLN3YAL040C ESC8Q08119 714 aa2.82□□□□□ -1.96
CLN3YAL040C LPX1Q12405 387 aaKnown RBP2.82□□□□□ -1.96
CLN3YAL040C ENT1Q12518 454 aa2.82□□□□□ -1.96
CLN3YAL040C YBL113CQ7M4S9 792 aa2.82□□□□□ -1.96
CLN3YAL040C TSA1P34760 196 aaKnown RBP2.82□□□□□ -1.96
CLN3YAL040C EXO5P38289 585 aa2.82□□□□□ -1.96
CLN3YAL040C PPX1P38698 397 aa2.82□□□□□ -1.96
CLN3YAL040C HSE1P38753 452 aa2.82□□□□□ -1.96
CLN3YAL040C PTC7P38797 343 aa2.82□□□□□ -1.96
CLN3YAL040C ERP5P38819 212 aa2.82□□□□□ -1.96
CLN3YAL040C YAR028WP39548 234 aa2.82□□□□□ -1.96
CLN3YAL040C TPP1Q03796 238 aa2.82□□□□□ -1.96
CLN3YAL040C PUS7Q08647 676 aaKnown RBP2.82□□□□□ -1.96
CLN3YAL040C DAL5P15365 543 aa2.81□□□□□ -1.96
CLN3YAL040C ATG14P38270 344 aa2.81□□□□□ -1.96
CLN3YAL040C FPR3P38911 411 aaKnown RBP2.81□□□□□ -1.96
CLN3YAL040C YIL092WP40497 633 aa2.81□□□□□ -1.96
CLN3YAL040C GTS1P40956 396 aa2.81□□□□□ -1.96
CLN3YAL040C MDJ2P42834 146 aa2.81□□□□□ -1.96
CLN3YAL040C SLS1P42900 643 aa2.81□□□□□ -1.96
CLN3YAL040C OSW7P43611 510 aa2.81□□□□□ -1.96
CLN3YAL040C FOL2P51601 243 aaKnown RBP2.81□□□□□ -1.96
CLN3YAL040C ADE16P54113 591 aaKnown RBP2.81□□□□□ -1.96
CLN3YAL040C YCS4Q06156 1176 aa2.81□□□□□ -1.96
CLN3YAL040C NUT2Q06213 157 aa2.81□□□□□ -1.96
CLN3YAL040C HRK1Q08732 759 aaKnown RBP2.81□□□□□ -1.96
CLN3YAL040C SIR4P11978 1358 aa2.8□□□□□ -1.96
CLN3YAL040C NUP145P49687 1317 aa2.8□□□□□ -1.96
CLN3YAL040C ATE1P16639 503 aa2.8□□□□□ -1.96
CLN3YAL040C PRP6P19735 899 aaPredicted RBP2.8□□□□□ -1.96
CLN3YAL040C NEM1P38757 446 aa2.8□□□□□ -1.96
CLN3YAL040C RRT14P40470 206 aa2.8□□□□□ -1.96
CLN3YAL040C YJR008WP47085 338 aa2.8□□□□□ -1.96
CLN3YAL040C POL32P47110 350 aa2.8□□□□□ -1.96
CLN3YAL040C VPS72Q03388 795 aa2.8□□□□□ -1.96
CLN3YAL040C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
CLN3YAL040C YOL098CQ12496 1037 aa2.8□□□□□ -1.96
CLN3YAL040C FRT1Q99332 602 aa2.8□□□□□ -1.96
CLN3YAL040C COQ4O13525 335 aa2.79□□□□□ -1.96
CLN3YAL040C YHL012WP38709 493 aa2.79□□□□□ -1.96
CLN3YAL040C RIM8P53179 542 aa2.79□□□□□ -1.96
CLN3YAL040C YGR122WP53272 402 aa2.79□□□□□ -1.96
CLN3YAL040C YNL050CP53952 270 aa2.79□□□□□ -1.96
CLN3YAL040C ZDS2P54786 942 aa2.79□□□□□ -1.96
CLN3YAL040C SRT1Q03175 343 aa2.79□□□□□ -1.96
CLN3YAL040C YLR257WQ06146 321 aaKnown RBP2.79□□□□□ -1.96
CLN3YAL040C LAP2Q10740 671 aa2.79□□□□□ -1.96
CLN3YAL040C TOM1Q03280 3268 aa2.79□□□□□ -1.96
CLN3YAL040C RET1P22276 1149 aaKnown RBP2.79□□□□□ -1.96
CLN3YAL040C MDL2P33311 773 aa2.79□□□□□ -1.96
CLN3YAL040C THI80P35202 319 aa2.79□□□□□ -1.96
CLN3YAL040C YHL050CP38721 697 aa2.79□□□□□ -1.96
CLN3YAL040C YHR219WP38900 624 aa2.79□□□□□ -1.96
CLN3YAL040C GIP4P39732 760 aa2.79□□□□□ -1.96
CLN3YAL040C YJR107WP47145 328 aa2.79□□□□□ -1.96
CLN3YAL040C RNH70P53331 553 aa2.79□□□□□ -1.96
CLN3YAL040C MRPL22P53881 309 aa2.79□□□□□ -1.96
CLN3YAL040C NOG1Q02892 647 aaKnown RBP2.79□□□□□ -1.96
CLN3YAL040C UBX5Q06682 500 aa2.79□□□□□ -1.96
CLN3YAL040C IMH1Q06704 911 aaKnown RBP2.79□□□□□ -1.96
CLN3YAL040C GPI13Q07830 1017 aa2.79□□□□□ -1.96
CLN3YAL040C ALE1Q08548 619 aa2.79□□□□□ -1.96
CLN3YAL040C BMS1Q08965 1183 aaKnown RBP2.79□□□□□ -1.96
CLN3YAL040C WHI5Q12416 295 aa2.79□□□□□ -1.96
CLN3YAL040C GCD6P32501 712 aaKnown RBP2.78□□□□□ -1.96
CLN3YAL040C SQT1P35184 431 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms