RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 ScaperF8VQ70 1398 aaKnown RBP10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cpsf2O35218 782 aaKnown RBP10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Kif5cP28738 956 aaKnown RBP10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cplx4Q80WM3 160 aa10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Plcd3Q8K2J0 785 aa10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 BlvraQ9CY64 295 aa10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 ScribQ80U72 1612 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Stx1aO35526 288 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ccdc12Q8R344 166 aaKnown RBP10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Eftud2O08810 971 aaKnown RBP10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 PrphP15331 475 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Slc38a10Q5I012 1090 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cfap100Q80VN0 613 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gtf3c5Q8R2T8 520 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Fkbp4P30416 458 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Eef1dP57776 281 aaKnown RBP10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Sass6Q80UK7 654 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 ImmtQ8CAQ8 757 aaKnown RBP10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Sil1Q9EPK6 465 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Rcan3Q9JKK0 239 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cc2d2aQ8CFW7 1633 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Dhx29Q6PGC1 1365 aaKnown RBP10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ccdc148Q6P5U8 527 aa10.7□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Diaph2O70566 1098 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Kiaa1328Q6NZK5 612 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Speer3W4VSP1 261 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Prr16A3KMN5 304 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 ArsiQ32KI9 573 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cnga2Q62398 664 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cep128Q8BI22 1102 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Calcoco1Q8CGU1 691 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Sdc2P43407 202 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Adcy5P84309 1262 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Fez2Q6TYB5 348 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Kiaa1524Q8BWY9 907 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Homer2Q9QWW1 354 aa10.69□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Rad23bP54728 416 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Zranb3Q6NZP1 1069 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 RbsnQ80Y56 783 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Taf7lQ9D3R9 471 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Xab2Q9DCD2 855 aaKnown RBP10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cacna2d3Q9Z1L5 1091 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Rpgrip1lQ8CG73 1264 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Pof1bQ8K4L4 587 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Opa1P58281 960 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gbp9Q8BTS3 619 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Bag4Q8CI61 457 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ankrd1Q9CR42 319 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Zbtb22Q9Z0G7 638 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gbp6A0A0G2JDV3 611 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gm43302L7N1X8 611 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ccdc129Q14B48 1034 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gsta4P24472 222 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Riok3Q9DBU3 519 aaKnown RBP10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Vps18Q8R307 973 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Yeats4Q9CR11 227 aaKnown RBP10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 AidaQ8C4Q6 305 aa10.68□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ccdc122Q8BVN0 290 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Serpinb6bO08804 377 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Atp2a2O55143 1044 aaKnown RBP10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Nucb2P81117 420 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ppfia2Q8BSS9 1257 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gramd4Q8CB44 633 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Fam204aQ8C6C7 236 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Vps52Q8C754 723 aaKnown RBP10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gm28919A0A087WP35 240 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Agbl1Q09M05 972 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 TatQ8QZR1 454 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 SncbQ91ZZ3 133 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 CftrP26361 1476 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Kif2aP28740 705 aa10.67□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gng11P61953 73 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Erich2E9Q1A6 463 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Trim34aQ99PP6 485 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Six6os1Q9CTN5 574 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Fam114a1Q9D281 569 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Nphp3Q7TNH6 1325 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Smarca4Q3TKT4 1613 aaKnown RBP10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 ErbinQ80TH2 1402 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Top1mtQ8R4U6 593 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Rai14Q9EP71 979 aaKnown RBP10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Znf287Q9EQB9 759 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 1700122O11RikJ3QPW6 241 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 ImpactO55091 318 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Tnni2P13412 182 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Znf653Q6YND2 615 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Sclt1G5E861 688 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Nedd9O35177 833 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Epb41l2O70318 988 aaKnown RBP10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Kif5aP33175 1027 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Map3k13Q1HKZ5 959 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gtpbp10Q8K013 366 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Gm28510A0A087WP28 240 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Zswim4Q8C7B8 1101 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cdan1Q8CC12 1239 aa10.66□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Stmn1P54227 149 aaKnown RBP10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 SfswapQ3USH5 945 aaKnown RBP10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Synpo2Q91YE8 1087 aaKnown RBP10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Tpx2A2APB8 745 aaKnown RBP10.65□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ppfibp1Q8C8U0 969 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 106.4 ms