RNA–Protein interactions for RNA: ENSMUST00000102612.1

Ccdc42-202, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 1 (best) BASIC

Gene Ccdc42, Length 785 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-202ENSMUST00000102612 Tango6Q8C3S2 1079 aa13.43□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Nav1Q8CH77 1875 aa13.43□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Rtf1A2AQ19 715 aaKnown RBP13.42□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 B4galnt4Q766D5 1034 aa13.42□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Tktl2Q9D4D4 627 aa13.42□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 MetP16056 1379 aa13.42□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Frmpd3A0A140LIW3 1774 aa13.41□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Prr29B1ARI9 187 aa13.41□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Slurp2P0DP59 97 aa13.41□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Q4VA45 678 aa13.41□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Btbd11Q6GQW0 1109 aa13.41□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Atf7ipQ7TT18 1306 aa13.4□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 EgfrQ01279 1210 aa13.4□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Cers3Q1A3B0 383 aa13.4□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Gtpbp6Q3U6U5 514 aa13.4□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Gm12185Q5NCB2 835 aa13.4□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 PrimpolQ6P1E7 537 aa13.4□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Q8C6G1 249 aa13.4□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Ciapin1Q8WTY4 309 aa13.4□□□□□ -0.26
Ccdc42-202ENSMUST00000102612 Klrk1O54709 232 aa13.39□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Mrs2Q5NCE8 434 aa13.39□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Golga2Q921M4 999 aa13.39□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Rapgef4Q9EQZ6 1011 aa13.39□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Ambra1A2AH22 1300 aa13.39□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Prr5lA2AVJ5 370 aa13.38□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Strn4P58404 760 aa13.38□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Zscan21Q07231 555 aa13.38□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Gigyf1Q99MR1 1044 aaKnown RBP13.38□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Itgb4A2A863 1818 aa13.37□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Myo5bP21271 1818 aa13.37□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Esx1O88933 382 aa13.37□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Ms4a5Q810P8 197 aa13.37□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Flad1Q8R123 492 aa13.37□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Pik3ap1Q9EQ32 811 aa13.37□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Sall2Q9QX96 1004 aa13.37□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 D830030K20RikE9PYQ5 218 aa13.36□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Gm3043K7N693 218 aa13.36□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Gm16440K7N6G6 218 aa13.36□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Gm2244L7N2A3 218 aa13.36□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Gm3278L7N2D2 218 aa13.36□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Gm8271L7N2E2 218 aa13.36□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Snai1Q02085 264 aa13.36□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Mex3cQ05A36 652 aaKnown RBP13.35□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Cnnm1Q0GA42 951 aa13.35□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Iqsec3Q3TES0 1195 aa13.35□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Tshz2Q68FE9 1030 aa13.35□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Esco1Q69Z69 843 aa13.35□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Irx6Q9ER75 438 aa13.35□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Cavin4A2AMM0 362 aa13.34□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Stra8P70278 393 aa13.34□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Map4k4P97820 1233 aaKnown RBP13.34□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Upf1Q9EPU0 1124 aaKnown RBP13.34□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 TefQ9JLC6 301 aa13.34□□□□□ -0.27
Ccdc42-202ENSMUST00000102612 Gja5Q01231 358 aa13.33□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Arid3aQ62431 601 aa13.33□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Slf2Q6P9P0 1278 aa13.33□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Gjd4Q8BSD4 364 aa13.33□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Spire2Q8K1S6 718 aa13.33□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 NpcdF8VQB8 469 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Prim1P20664 417 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Ggnbp2Q5SV77 696 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Unc5clQ6R653 518 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Pdzph1Q8BGR1 1238 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 NrdcQ8BHG1 1161 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 SowahdQ8BY98 327 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Socs7Q8VHQ2 579 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Swt1Q9DBQ9 907 aa13.32□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 CastP51125 788 aa13.31□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Dusp27Q148W8 1138 aa13.31□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Prkab2Q6PAM0 271 aa13.31□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Cd248Q91V98 765 aa13.31□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Ddx60E9PZQ1 1711 aa13.3□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 XpcP51612 930 aa13.3□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Ptcd1Q8C2E4 695 aaKnown RBP13.3□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Styxl1Q9DAR2 321 aa13.3□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Col4a5Q63ZW6 1691 aa13.3□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Usp19Q3UJD6 1360 aa13.3□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Zbtb7aO88939 569 aaKnown RBP13.29□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 CfhP06909 1234 aa13.29□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 PgfP49764 158 aa13.29□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Thrap3Q569Z6 951 aaKnown RBP13.29□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Stxbp5lQ5DQR4 1185 aa13.29□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 St5Q924W7 1134 aa13.29□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 NgdnQ9DB96 315 aaKnown RBP13.29□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Znf541Q0GGX2 1363 aa13.29□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 UtrnE9Q6R7 3430 aa13.28□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Ifit1bl2Q3U687 466 aa13.28□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Slc39a6Q8C145 765 aa13.28□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Pdia6Q922R8 440 aaKnown RBP13.28□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Taf7Q9R1C0 341 aa13.28□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Col5a2Q3U962 1497 aa13.28□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Col4a1P02463 1669 aa13.28□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Dlg5E9Q9R9 1921 aa13.27□□□□□ -0.28
Ccdc42-202ENSMUST00000102612 Olfr247E9PVJ7 320 aa13.27□□□□□ -0.29
Ccdc42-202ENSMUST00000102612 Pibf1E9Q6K3 756 aa13.27□□□□□ -0.29
Ccdc42-202ENSMUST00000102612 Olfr819K7N727 320 aa13.27□□□□□ -0.29
Ccdc42-202ENSMUST00000102612 Slc4a2P13808 1237 aaKnown RBP13.27□□□□□ -0.29
Ccdc42-202ENSMUST00000102612 Eif4a1P60843 406 aaKnown RBP13.27□□□□□ -0.29
Ccdc42-202ENSMUST00000102612 Rbm46P86049 533 aa13.27□□□□□ -0.29
Ccdc42-202ENSMUST00000102612 Uspl1Q3ULM6 1089 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms