RNA–Protein interactions for RNA: ENSMUST00000102612.1

Ccdc42-202, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 1 (best) BASIC

Gene Ccdc42, Length 785 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-202ENSMUST00000102612 Gm35339A0A140LHH9 1649 aa23.68■■□□□ 1.38
Ccdc42-202ENSMUST00000102612 NischQ80TM9 1593 aa23.26■■□□□ 1.31
Ccdc42-202ENSMUST00000102612 Abcc8B2RUS7 1588 aa22.59■■□□□ 1.21
Ccdc42-202ENSMUST00000102612 Abcc9P70170 1546 aa22.44■■□□□ 1.18
Ccdc42-202ENSMUST00000102612 Chic1Q8CBW7 227 aa22.03■■□□□ 1.12
Ccdc42-202ENSMUST00000102612 ScribQ80U72 1612 aa21.95■■□□□ 1.1
Ccdc42-202ENSMUST00000102612 NacadQ5SWP3 1504 aa21.26■□□□□ 0.99
Ccdc42-202ENSMUST00000102612 Mapk8ip2Q9ERE9 830 aa21.22■□□□□ 0.99
Ccdc42-202ENSMUST00000102612 Kdm5dQ62240 1548 aa21.14■□□□□ 0.98
Ccdc42-202ENSMUST00000102612 Sycp2Q9CUU3 1500 aa20.85■□□□□ 0.93
Ccdc42-202ENSMUST00000102612 Dcaf1Q80TR8 1506 aa20.69■□□□□ 0.9
Ccdc42-202ENSMUST00000102612 BicraF8VPZ9 1578 aa20.61■□□□□ 0.89
Ccdc42-202ENSMUST00000102612 Dnajc5bQ9CQ94 199 aa20.59■□□□□ 0.89
Ccdc42-202ENSMUST00000102612 Rb1cc1Q9ESK9 1588 aa20.21■□□□□ 0.83
Ccdc42-202ENSMUST00000102612 Pds5bQ4VA53 1446 aaKnown RBP20.14■□□□□ 0.81
Ccdc42-202ENSMUST00000102612 Thoc2B1AZI6 1594 aaKnown RBP20.04■□□□□ 0.8
Ccdc42-202ENSMUST00000102612 Crybg2B7ZCC2 1516 aa19.97■□□□□ 0.79
Ccdc42-202ENSMUST00000102612 Baz1aO88379 1555 aa19.92■□□□□ 0.78
Ccdc42-202ENSMUST00000102612 Atad2bE9Q166 1460 aaKnown RBP19.87■□□□□ 0.77
Ccdc42-202ENSMUST00000102612 Ccdc180J3QNE4 1664 aa19.87■□□□□ 0.77
Ccdc42-202ENSMUST00000102612 Rhox8Q6VSS7 320 aa19.79■□□□□ 0.76
Ccdc42-202ENSMUST00000102612 Phf23Q8BSN5 401 aa19.79■□□□□ 0.76
Ccdc42-202ENSMUST00000102612 Cc2d2aQ8CFW7 1633 aa19.72■□□□□ 0.75
Ccdc42-202ENSMUST00000102612 Zcchc6Q5BLK4 1491 aaKnown RBP19.69■□□□□ 0.74
Ccdc42-202ENSMUST00000102612 Ercc6F8VPZ5 1481 aa19.66■□□□□ 0.74
Ccdc42-202ENSMUST00000102612 Smarca2Q6DIC0 1577 aa19.59■□□□□ 0.73
Ccdc42-202ENSMUST00000102612 Smarca4Q3TKT4 1613 aaKnown RBP19.54■□□□□ 0.72
Ccdc42-202ENSMUST00000102612 Fam135aQ6NS59 1506 aa19.52■□□□□ 0.72
Ccdc42-202ENSMUST00000102612 Iqgap2Q3UQ44 1575 aa19.48■□□□□ 0.71
Ccdc42-202ENSMUST00000102612 Cecr2E9Q2Z1 1453 aa19.4■□□□□ 0.7
Ccdc42-202ENSMUST00000102612 Phldb1Q6PDH0 1371 aaKnown RBP19.38■□□□□ 0.69
Ccdc42-202ENSMUST00000102612 Frmpd1A2AKB4 1549 aa19.37■□□□□ 0.69
Ccdc42-202ENSMUST00000102612 Wdr62Q3U3T8 1523 aa19.37■□□□□ 0.69
Ccdc42-202ENSMUST00000102612 Baz1bQ9Z277 1479 aa19.35■□□□□ 0.69
Ccdc42-202ENSMUST00000102612 Plppr3Q7TPB0 716 aa19.32■□□□□ 0.68
Ccdc42-202ENSMUST00000102612 Ubl4bQ9CQ84 188 aa19.24■□□□□ 0.67
Ccdc42-202ENSMUST00000102612 Mrc2Q64449 1479 aa19.09■□□□□ 0.65
Ccdc42-202ENSMUST00000102612 Gab3Q8BSM5 595 aa19.07■□□□□ 0.64
Ccdc42-202ENSMUST00000102612 Unc13aQ4KUS2 1712 aa19.03■□□□□ 0.64
Ccdc42-202ENSMUST00000102612 Dnajc5P60904 198 aa19.01■□□□□ 0.63
Ccdc42-202ENSMUST00000102612 CftrP26361 1476 aa18.9■□□□□ 0.62
Ccdc42-202ENSMUST00000102612 Cttnbp2B9EJA2 1648 aa18.85■□□□□ 0.61
Ccdc42-202ENSMUST00000102612 Trim41Q5NCC3 630 aa18.83■□□□□ 0.6
Ccdc42-202ENSMUST00000102612 Synj1Q8CHC4 1574 aa18.79■□□□□ 0.6
Ccdc42-202ENSMUST00000102612 Rtl1Q7M732 1744 aa18.79■□□□□ 0.6
Ccdc42-202ENSMUST00000102612 Brd4Q9ESU6 1400 aaKnown RBP18.78■□□□□ 0.6
Ccdc42-202ENSMUST00000102612 Lrriq1Q0P5X1 1673 aa18.66■□□□□ 0.58
Ccdc42-202ENSMUST00000102612 Cux2P70298 1426 aa18.64■□□□□ 0.57
Ccdc42-202ENSMUST00000102612 Rsf1E9PWW9 1441 aaKnown RBP18.63■□□□□ 0.57
Ccdc42-202ENSMUST00000102612 Ccdc136Q3TVA9 1136 aa18.61■□□□□ 0.57
Ccdc42-202ENSMUST00000102612 Esf1Q3V1V3 845 aaKnown RBP18.59■□□□□ 0.57
Ccdc42-202ENSMUST00000102612 Kif15Q6P9L6 1387 aa18.57■□□□□ 0.56
Ccdc42-202ENSMUST00000102612 Kif21aQ9QXL2 1672 aa18.51■□□□□ 0.55
Ccdc42-202ENSMUST00000102612 Npm1Q61937 292 aaKnown RBP18.47■□□□□ 0.55
Ccdc42-202ENSMUST00000102612 Lamc3Q9R0B6 1581 aa18.42■□□□□ 0.54
Ccdc42-202ENSMUST00000102612 Shroom2A2ALU4 1481 aa18.41■□□□□ 0.54
Ccdc42-202ENSMUST00000102612 Eif4g3Q80XI3 1579 aaKnown RBP18.39■□□□□ 0.53
Ccdc42-202ENSMUST00000102612 Cep164Q5DU05 1446 aa18.34■□□□□ 0.53
Ccdc42-202ENSMUST00000102612 Urb2E9Q7L1 1524 aaKnown RBP18.25■□□□□ 0.51
Ccdc42-202ENSMUST00000102612 Senp3Q9EP97 568 aaKnown RBP18.24■□□□□ 0.51
Ccdc42-202ENSMUST00000102612 Col17a1Q07563 1470 aa18.22■□□□□ 0.51
Ccdc42-202ENSMUST00000102612 Dhx29Q6PGC1 1365 aaKnown RBP18.22■□□□□ 0.51
Ccdc42-202ENSMUST00000102612 Pabpn1Q8CCS6 302 aaKnown RBP18.22■□□□□ 0.51
Ccdc42-202ENSMUST00000102612 Plb1Q3TTY0 1478 aa18.21■□□□□ 0.51
Ccdc42-202ENSMUST00000102612 Ccdc18Q640L5 1455 aa18.17■□□□□ 0.5
Ccdc42-202ENSMUST00000102612 Il27Q8K3I6 234 aa18.16■□□□□ 0.5
Ccdc42-202ENSMUST00000102612 LrpprcQ6PB66 1392 aaKnown RBP18.16■□□□□ 0.5
Ccdc42-202ENSMUST00000102612 Top2bQ64511 1612 aa18.12■□□□□ 0.49
Ccdc42-202ENSMUST00000102612 Crocc2F6XLV1 1638 aa18.09■□□□□ 0.49
Ccdc42-202ENSMUST00000102612 TnnQ80Z71 1560 aa18.08■□□□□ 0.49
Ccdc42-202ENSMUST00000102612 Ift140E9PY46 1464 aa18.04■□□□□ 0.48
Ccdc42-202ENSMUST00000102612 Camsap1A2AHC3 1581 aa18.03■□□□□ 0.48
Ccdc42-202ENSMUST00000102612 Pelp1Q9DBD5 1123 aaKnown RBP18.02■□□□□ 0.48
Ccdc42-202ENSMUST00000102612 Rusc2Q80U22 1514 aa18.01■□□□□ 0.47
Ccdc42-202ENSMUST00000102612 PogzQ8BZH4 1409 aaKnown RBP17.99■□□□□ 0.47
Ccdc42-202ENSMUST00000102612 Golga3P55937 1487 aa17.97■□□□□ 0.47
Ccdc42-202ENSMUST00000102612 Zcchc11B2RX14 1644 aaKnown RBP17.95■□□□□ 0.46
Ccdc42-202ENSMUST00000102612 Duox2A2AQ99 1517 aa17.91■□□□□ 0.46
Ccdc42-202ENSMUST00000102612 Cngb1E1AZ71 1325 aa17.91■□□□□ 0.46
Ccdc42-202ENSMUST00000102612 Disp1Q3TDN0 1521 aa17.88■□□□□ 0.45
Ccdc42-202ENSMUST00000102612 Fmn1Q05860 1466 aa17.84■□□□□ 0.45
Ccdc42-202ENSMUST00000102612 Cc2d2bA0A286YDU8 1405 aa17.81■□□□□ 0.44
Ccdc42-202ENSMUST00000102612 Nup160Q9Z0W3 1402 aaKnown RBP17.79■□□□□ 0.44
Ccdc42-202ENSMUST00000102612 Grin2bQ01097 1482 aa17.78■□□□□ 0.44
Ccdc42-202ENSMUST00000102612 Setd1bQ8CFT2 1985 aa17.75■□□□□ 0.43
Ccdc42-202ENSMUST00000102612 Pbrm1Q8BSQ9 1634 aaKnown RBP17.74■□□□□ 0.43
Ccdc42-202ENSMUST00000102612 Kcna4Q61423 654 aa17.74■□□□□ 0.43
Ccdc42-202ENSMUST00000102612 Efcab5A0JP43 1406 aa17.73■□□□□ 0.43
Ccdc42-202ENSMUST00000102612 Samd9lQ69Z37 1561 aa17.7■□□□□ 0.42
Ccdc42-202ENSMUST00000102612 Pcdh10E9PXQ7 1057 aa17.7■□□□□ 0.42
Ccdc42-202ENSMUST00000102612 Adgrl3Q80TS3 1537 aa17.7■□□□□ 0.42
Ccdc42-202ENSMUST00000102612 PtprkP35822 1457 aa17.69■□□□□ 0.42
Ccdc42-202ENSMUST00000102612 Fgd6Q69ZL1 1399 aa17.67■□□□□ 0.42
Ccdc42-202ENSMUST00000102612 Arhgef5E9Q7D5 1581 aa17.66■□□□□ 0.42
Ccdc42-202ENSMUST00000102612 Gm156Q58A37 223 aa17.66■□□□□ 0.42
Ccdc42-202ENSMUST00000102612 Rad54l2Q99NG0 1466 aa17.63■□□□□ 0.41
Ccdc42-202ENSMUST00000102612 Ttbk1Q6PCN3 1308 aa17.63■□□□□ 0.41
Ccdc42-202ENSMUST00000102612 AqrQ8CFQ3 1481 aaKnown RBP17.63■□□□□ 0.41
Ccdc42-202ENSMUST00000102612 Grin2aP35436 1464 aa17.62■□□□□ 0.41
Ccdc42-202ENSMUST00000102612 Gapvd1Q6PAR5 1458 aa17.62■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms