RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Ginm1Q91WR6 327 aa15.4■□□□□ 0.06
Lig3-202ENSMUST00000080461 Exoc6bA6H5Z3 810 aa15.4■□□□□ 0.06
Lig3-202ENSMUST00000080461 Wdr63B2RY71 923 aa15.4■□□□□ 0.06
Lig3-202ENSMUST00000080461 HellsQ60848 821 aa15.4■□□□□ 0.06
Lig3-202ENSMUST00000080461 Map3k2Q61083 619 aa15.4■□□□□ 0.06
Lig3-202ENSMUST00000080461 Cgnl1Q6AW69 1298 aa15.4■□□□□ 0.06
Lig3-202ENSMUST00000080461 Slc5a4bQ91ZP4 660 aa15.4■□□□□ 0.06
Lig3-202ENSMUST00000080461 Flad1Q8R123 492 aa15.39■□□□□ 0.05
Lig3-202ENSMUST00000080461 Atp8b2P98199 1209 aa15.39■□□□□ 0.05
Lig3-202ENSMUST00000080461 Shank2Q80Z38 1476 aa15.39■□□□□ 0.05
Lig3-202ENSMUST00000080461 Zap70P43404 618 aa15.38■□□□□ 0.05
Lig3-202ENSMUST00000080461 Sik1Q60670 779 aa15.38■□□□□ 0.05
Lig3-202ENSMUST00000080461 Lrp6O88572 1613 aa15.38■□□□□ 0.05
Lig3-202ENSMUST00000080461 Igfbp6P47880 238 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Gcc1Q9D4H2 778 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Mast2Q60592 1734 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ccdc129Q14B48 1034 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Tbc1d32Q3URV1 1296 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ppp1r9bQ6R891 817 aaKnown RBP15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Pm20d1Q8C165 503 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ccdc27Q3V036 639 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Mphosph10Q810V0 681 aaKnown RBP15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Srgap3Q812A2 1099 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ppp1r42Q8R1Z4 357 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Tmc1Q8R4P5 757 aa15.37■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ccnl1Q52KE7 532 aaKnown RBP15.36■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ppm1mQ8BU27 406 aa15.36■□□□□ 0.05
Lig3-202ENSMUST00000080461 Cwc27Q3TKY6 469 aa15.36■□□□□ 0.05
Lig3-202ENSMUST00000080461 Bicc1Q99MQ1 977 aaKnown RBP15.36■□□□□ 0.05
Lig3-202ENSMUST00000080461 KnstrnQ9D9Z1 312 aaKnown RBP15.36■□□□□ 0.05
Lig3-202ENSMUST00000080461 Erbb4Q61527 1308 aa15.36■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ddx60E9PZQ1 1711 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Cfdp1O88271 295 aaKnown RBP15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Tbc1d9Q3UYK3 1264 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Kif2cQ922S8 721 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Tfip11Q9ERA6 838 aaKnown RBP15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Mcm2P97310 904 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Exoc5Q3TPX4 708 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ankrd23Q812A3 306 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 ApobrQ8VBT6 942 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Atg4a-psA0A0G2JFS9 396 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ttll7A4Q9F0 912 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Mmp8O70138 465 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Hspa2P17156 633 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Stk11ipQ3TAA7 1072 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Atg4aQ8C9S8 396 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Trim52Q8CDV4 233 aa15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Eif3aP23116 1344 aaKnown RBP15.35■□□□□ 0.05
Lig3-202ENSMUST00000080461 Vps33bP59016 617 aa15.34■□□□□ 0.05
Lig3-202ENSMUST00000080461 Slc39a6Q8C145 765 aa15.34■□□□□ 0.05
Lig3-202ENSMUST00000080461 Nphp1Q9QY53 687 aa15.34■□□□□ 0.05
Lig3-202ENSMUST00000080461 Cers3Q1A3B0 383 aa15.34■□□□□ 0.05
Lig3-202ENSMUST00000080461 Mylk2Q8VCR8 613 aa15.34■□□□□ 0.05
Lig3-202ENSMUST00000080461 Bcar3Q9QZK2 820 aa15.34■□□□□ 0.05
Lig3-202ENSMUST00000080461 Nwd2Q6P5U7 1742 aa15.34■□□□□ 0.05
Lig3-202ENSMUST00000080461 Cacna1sQ02789 1880 aa15.34■□□□□ 0.05
Lig3-202ENSMUST00000080461 Tlr7P58681 1050 aa15.33■□□□□ 0.05
Lig3-202ENSMUST00000080461 Ankle2Q6P1H6 964 aa15.33■□□□□ 0.05
Lig3-202ENSMUST00000080461 Psrc1Q9D0P7 329 aa15.33■□□□□ 0.04
Lig3-202ENSMUST00000080461 Sptbn5F6UCX4 1208 aa15.32■□□□□ 0.04
Lig3-202ENSMUST00000080461 Ier5O89113 308 aa15.32■□□□□ 0.04
Lig3-202ENSMUST00000080461 Mum1Q6DID5 682 aa15.32■□□□□ 0.04
Lig3-202ENSMUST00000080461 Ggt6Q6PDE7 497 aa15.32■□□□□ 0.04
Lig3-202ENSMUST00000080461 Col4a1P02463 1669 aa15.32■□□□□ 0.04
Lig3-202ENSMUST00000080461 Rabep1O35551 862 aa15.31■□□□□ 0.04
Lig3-202ENSMUST00000080461 Hdac6Q9Z2V5 1149 aa15.31■□□□□ 0.04
Lig3-202ENSMUST00000080461 Cap2Q9CYT6 476 aa15.31■□□□□ 0.04
Lig3-202ENSMUST00000080461 MypnQ5DTJ9 1315 aa15.31■□□□□ 0.04
Lig3-202ENSMUST00000080461 Nav1Q8CH77 1875 aa15.3■□□□□ 0.04
Lig3-202ENSMUST00000080461 Mcmdc2E9Q956 681 aa15.3■□□□□ 0.04
Lig3-202ENSMUST00000080461 Slc4a10Q5DTL9 1118 aa15.3■□□□□ 0.04
Lig3-202ENSMUST00000080461 Jarid2Q62315 1234 aa15.3■□□□□ 0.04
Lig3-202ENSMUST00000080461 Grm8P47743 908 aa15.3■□□□□ 0.04
Lig3-202ENSMUST00000080461 DaxxO35613 739 aa15.29■□□□□ 0.04
Lig3-202ENSMUST00000080461 Smg7Q5RJH6 1138 aaKnown RBP15.29■□□□□ 0.04
Lig3-202ENSMUST00000080461 Lmbr1lQ9D1E5 489 aa15.29■□□□□ 0.04
Lig3-202ENSMUST00000080461 Tnrc6cQ3UHC0 1690 aaKnown RBP15.29■□□□□ 0.04
Lig3-202ENSMUST00000080461 Emilin2Q8K482 1074 aa15.29■□□□□ 0.04
Lig3-202ENSMUST00000080461 Tceal9Q9DD24 104 aa15.29■□□□□ 0.04
Lig3-202ENSMUST00000080461 Cyp46a1Q9WVK8 500 aa15.29■□□□□ 0.04
Lig3-202ENSMUST00000080461 Hoxa7P02830 229 aa15.28■□□□□ 0.04
Lig3-202ENSMUST00000080461 Ddb1Q3U1J4 1140 aaKnown RBP15.28■□□□□ 0.04
Lig3-202ENSMUST00000080461 Gm12185Q5NCB2 835 aa15.28■□□□□ 0.04
Lig3-202ENSMUST00000080461 Zbtb40Q6PCS8 1258 aa15.28■□□□□ 0.04
Lig3-202ENSMUST00000080461 Prune1Q8BIW1 454 aa15.28■□□□□ 0.04
Lig3-202ENSMUST00000080461 Rfx1P48377 963 aa15.28■□□□□ 0.04
Lig3-202ENSMUST00000080461 Clcn1Q64347 994 aa15.27■□□□□ 0.04
Lig3-202ENSMUST00000080461 Ddx58Q6Q899 926 aa15.27■□□□□ 0.04
Lig3-202ENSMUST00000080461 Kndc1Q0KK55 1742 aa15.27■□□□□ 0.03
Lig3-202ENSMUST00000080461 Sipa1l3G3X9J0 1776 aa15.27■□□□□ 0.03
Lig3-202ENSMUST00000080461 Tgfb1i1Q62219 461 aa15.27■□□□□ 0.03
Lig3-202ENSMUST00000080461 Ripor2Q80U16 1078 aa15.27■□□□□ 0.03
Lig3-202ENSMUST00000080461 Q9D2X8 372 aa15.27■□□□□ 0.03
Lig3-202ENSMUST00000080461 Hmox1P14901 289 aa15.26■□□□□ 0.03
Lig3-202ENSMUST00000080461 Sf3b2Q3UJB0 878 aaKnown RBP15.26■□□□□ 0.03
Lig3-202ENSMUST00000080461 Dcaf5Q80T85 946 aa15.26■□□□□ 0.03
Lig3-202ENSMUST00000080461 Ank1Q02357 1862 aa15.26■□□□□ 0.03
Lig3-202ENSMUST00000080461 Mre11Q61216 706 aa15.26■□□□□ 0.03
Lig3-202ENSMUST00000080461 Syde2E9PUP1 1314 aa15.26■□□□□ 0.03
Lig3-202ENSMUST00000080461 Nhsl1Q8CAF4 1587 aa15.26■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms