RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Pdcl2Q78Y63 240 aa11.81□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Amotl2Q8K371 772 aa11.81□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Arhgef1Q61210 920 aaKnown RBP11.81□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Mphosph10Q810V0 681 aaKnown RBP11.81□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Slc35g1Q8BY79 368 aa11.81□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Camta1A2A891 1682 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Bach1P97302 739 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Tceal9Q9DD24 104 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Znf335A2A5K6 1337 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Rad50P70388 1312 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Mcm3P25206 812 aaKnown RBP11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Gse1Q3U3C9 1213 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Usp48Q3V0C5 1052 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Tex2Q6ZPJ0 1128 aaKnown RBP11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Ccar2Q8VDP4 922 aaKnown RBP11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Rufy3Q9D394 469 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Map2P20357 1828 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Zfp804bA0A0G2JGH6 1343 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Pa2g4P50580 394 aaKnown RBP11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Strn4P58404 760 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Mindy4Q3UQI9 744 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Sirt1Q923E4 737 aa11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Smc3Q9CW03 1217 aaKnown RBP11.8□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Pnpla7A2AJ88 1352 aa11.79□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Ddx19aQ61655 478 aaKnown RBP11.79□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Ccdc7Q9D541 371 aa11.79□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Mad1l1Q9WTX8 717 aaKnown RBP11.79□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 IbspQ61711 324 aa11.79□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Pik3c2aQ61194 1686 aa11.79□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 DpydQ8CHR6 1025 aa11.78□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Noc3lQ8VI84 807 aaKnown RBP11.78□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Stx6Q9JKK1 255 aa11.78□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Rreb1Q3UH06 1700 aaKnown RBP11.78□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Utp3Q9JI13 469 aaKnown RBP11.78□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 CoilQ5SU73 570 aa11.77□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Tgfb1i1Q62219 461 aa11.77□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Edc3Q8K2D3 508 aaKnown RBP11.77□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Tceanc2Q8R2M0 207 aa11.77□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Top1mtQ8R4U6 593 aa11.77□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 N4bp2F8VQG7 1678 aaKnown RBP11.77□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Ubr1O70481 1757 aa11.77□□□□□ -0.52
Ccdc40-202ENSMUST00000053440 Abcc10Q8R4P9 1501 aa11.77□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 NalcnQ8BXR5 1738 aa11.77□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Myo5bP21271 1818 aa11.77□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Slit2Q9R1B9 1521 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Cct4P80315 539 aaKnown RBP11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Adcy5P84309 1262 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Anp32cQ64G17 123 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Cdca7lQ922M5 438 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Syt1P46096 421 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Tti2Q8BGV4 512 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Slit3Q9WVB4 1523 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Fyb1O35601 819 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Bend3Q6PAL0 825 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ccdc178Q8CDV0 866 aa11.76□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Eif4a1P60843 406 aaKnown RBP11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Bach2P97303 839 aa11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Wdr93Q402B2 695 aa11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Tsr2Q8C8T8 191 aa11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Tmem94Q7TSH8 1360 aa11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ythdc1E9Q5K9 736 aaKnown RBP11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 CgnP59242 1191 aa11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Gsdma3Q5Y4Y6 464 aa11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ahnak2E9PYB0 1738 aaKnown RBP11.75□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Jarid2Q62315 1234 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ifit2Q64112 472 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Col16a1Q8BLX7 1580 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Cnksr1A2A9K7 700 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Btbd11Q6GQW0 1109 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Q9D9S1 216 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Il1rapl2Q9ERS6 686 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Cd22P35329 862 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ube2hP62257 183 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Nkx2-3P97334 362 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Zfp51Q3U4L8 781 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Map3k2Q61083 619 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ccdc66Q6NS45 935 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Zscan22Q8BGS5 496 aa11.74□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ccdc173A0JLY1 547 aa11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Polr3gQ6NXY9 223 aa11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Echdc1Q9D9V3 322 aa11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ppfia1B2RXQ2 1266 aa11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ets1P27577 440 aa11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Pkp1P97350 728 aaKnown RBP11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Sf3a1Q8K4Z5 791 aaKnown RBP11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 TatQ8QZR1 454 aa11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 NcapgE9PWG6 1004 aa11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Serpina10Q8R121 448 aa11.73□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Cfap73J3QPZ5 306 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Fam228bQ497Q6 232 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Mrpl50Q8VDT9 159 aaKnown RBP11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Trpm3Q5F4S9 1721 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Gpatch11Q3UFS4 262 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Snx13Q6PHS6 957 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Wdr24Q8CFJ9 790 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Zbtb3Q91X45 518 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Add2Q9QYB8 725 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Adcy9P51830 1353 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Fam184aE9PW83 1143 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Cavin1O54724 392 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms