RNA–Protein interactions for RNA: ENSMUST00000047740.3

Upk2-201, Transcript of Uroplakin-2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk2, Length 1,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2-201ENSMUST00000047740 Klhdc4Q921I2 584 aa17.17■□□□□ 0.34
Upk2-201ENSMUST00000047740 Pdia6Q922R8 440 aaKnown RBP17.17■□□□□ 0.34
Upk2-201ENSMUST00000047740 Atp1b3P97370 278 aa17.16■□□□□ 0.34
Upk2-201ENSMUST00000047740 TefQ9JLC6 301 aa17.16■□□□□ 0.34
Upk2-201ENSMUST00000047740 Lrp5Q91VN0 1614 aa17.16■□□□□ 0.34
Upk2-201ENSMUST00000047740 Stra8P70278 393 aa17.15■□□□□ 0.34
Upk2-201ENSMUST00000047740 Nsfl1cQ9CZ44 370 aaKnown RBP17.15■□□□□ 0.34
Upk2-201ENSMUST00000047740 Zfyve9A2A8R0 1397 aa17.15■□□□□ 0.34
Upk2-201ENSMUST00000047740 Pibf1E9Q6K3 756 aa17.14■□□□□ 0.33
Upk2-201ENSMUST00000047740 Bcl2l13P59017 434 aa17.14■□□□□ 0.33
Upk2-201ENSMUST00000047740 Gigyf1Q99MR1 1044 aaKnown RBP17.14■□□□□ 0.33
Upk2-201ENSMUST00000047740 Taf7Q9R1C0 341 aa17.14■□□□□ 0.33
Upk2-201ENSMUST00000047740 MetP16056 1379 aa17.14■□□□□ 0.33
Upk2-201ENSMUST00000047740 Col1a2Q01149 1372 aa17.14■□□□□ 0.33
Upk2-201ENSMUST00000047740 Col11a2Q64739 1736 aa17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 Tnnt1O88346 262 aa17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 Strn4P58404 760 aa17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 Slc39a6Q8C145 765 aa17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 GckrQ91X44 587 aa17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 Mrps5Q99N87 432 aaKnown RBP17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 Nav1Q8CH77 1875 aa17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 Plch1Q4KWH5 1682 aa17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 Uhrf1bp1B2KF50 1429 aa17.13■□□□□ 0.33
Upk2-201ENSMUST00000047740 Slc4a2P13808 1237 aaKnown RBP17.12■□□□□ 0.33
Upk2-201ENSMUST00000047740 Cers3Q1A3B0 383 aa17.12■□□□□ 0.33
Upk2-201ENSMUST00000047740 Dpf1Q9QX66 387 aa17.12■□□□□ 0.33
Upk2-201ENSMUST00000047740 Col4a1P02463 1669 aa17.12■□□□□ 0.33
Upk2-201ENSMUST00000047740 Myo5bP21271 1818 aa17.12■□□□□ 0.33
Upk2-201ENSMUST00000047740 Prr5lA2AVJ5 370 aa17.11■□□□□ 0.33
Upk2-201ENSMUST00000047740 Clcn6O35454 870 aa17.11■□□□□ 0.33
Upk2-201ENSMUST00000047740 Slurp2P0DP59 97 aa17.11■□□□□ 0.33
Upk2-201ENSMUST00000047740 Fkbp4P30416 458 aa17.11■□□□□ 0.33
Upk2-201ENSMUST00000047740 Tktl2Q9D4D4 627 aa17.11■□□□□ 0.33
Upk2-201ENSMUST00000047740 Sgip1Q8VD37 806 aa17.1■□□□□ 0.33
Upk2-201ENSMUST00000047740 Rapgef4Q9EQZ6 1011 aa17.1■□□□□ 0.33
Upk2-201ENSMUST00000047740 Ubn2Q80WC1 1314 aa17.1■□□□□ 0.33
Upk2-201ENSMUST00000047740 1700019A02RikA0A087WPV9 146 aa17.09■□□□□ 0.33
Upk2-201ENSMUST00000047740 U2surpQ6NV83 1029 aaKnown RBP17.09■□□□□ 0.33
Upk2-201ENSMUST00000047740 Rbm26Q6NZN0 1012 aaKnown RBP17.09■□□□□ 0.33
Upk2-201ENSMUST00000047740 ScaperF8VQ70 1398 aaKnown RBP17.08■□□□□ 0.32
Upk2-201ENSMUST00000047740 Tgfb2P27090 414 aa17.08■□□□□ 0.32
Upk2-201ENSMUST00000047740 Esco1Q69Z69 843 aa17.08■□□□□ 0.32
Upk2-201ENSMUST00000047740 Sall2Q9QX96 1004 aa17.08■□□□□ 0.32
Upk2-201ENSMUST00000047740 Snai1Q02085 264 aa17.07■□□□□ 0.32
Upk2-201ENSMUST00000047740 Chpf2Q3UU43 768 aa17.07■□□□□ 0.32
Upk2-201ENSMUST00000047740 Cyp2c67Q569X9 491 aa17.07■□□□□ 0.32
Upk2-201ENSMUST00000047740 Camkk2Q8C078 588 aa17.07■□□□□ 0.32
Upk2-201ENSMUST00000047740 Atxn3Q9CVD2 355 aa17.07■□□□□ 0.32
Upk2-201ENSMUST00000047740 CastP51125 788 aa17.06■□□□□ 0.32
Upk2-201ENSMUST00000047740 Taf1dQ9D4V4 322 aa17.06■□□□□ 0.32
Upk2-201ENSMUST00000047740 Gnai1B2RSH2 354 aa17.05■□□□□ 0.32
Upk2-201ENSMUST00000047740 Wdhd1P59328 1117 aa17.05■□□□□ 0.32
Upk2-201ENSMUST00000047740 SympkQ80X82 1284 aa17.05■□□□□ 0.32
Upk2-201ENSMUST00000047740 Ncbp3Q8BZR9 615 aaKnown RBP17.05■□□□□ 0.32
Upk2-201ENSMUST00000047740 CrbnQ8C7D2 445 aa17.05■□□□□ 0.32
Upk2-201ENSMUST00000047740 Usp16Q99LG0 825 aa17.05■□□□□ 0.32
Upk2-201ENSMUST00000047740 Gnai3Q9DC51 354 aa17.05■□□□□ 0.32
Upk2-201ENSMUST00000047740 Cfap70D3YVL2 1141 aa17.04■□□□□ 0.32
Upk2-201ENSMUST00000047740 Igfbp6P47880 238 aa17.04■□□□□ 0.32
Upk2-201ENSMUST00000047740 Q3TQI7 289 aaKnown RBP17.04■□□□□ 0.32
Upk2-201ENSMUST00000047740 Rnf180Q3U827 592 aa17.04■□□□□ 0.32
Upk2-201ENSMUST00000047740 Neurod2Q62414 383 aa17.04■□□□□ 0.32
Upk2-201ENSMUST00000047740 Zcwpw1Q6IR42 630 aa17.04■□□□□ 0.32
Upk2-201ENSMUST00000047740 Slf2Q6P9P0 1278 aa17.04■□□□□ 0.32
Upk2-201ENSMUST00000047740 Togaram1Q6A070 1776 aaKnown RBP17.03■□□□□ 0.32
Upk2-201ENSMUST00000047740 Rnaseh2aQ9CWY8 301 aa17.03■□□□□ 0.32
Upk2-201ENSMUST00000047740 Cdc37l1Q9CZP7 335 aa17.03■□□□□ 0.32
Upk2-201ENSMUST00000047740 NrdcQ8BHG1 1161 aa17.02■□□□□ 0.32
Upk2-201ENSMUST00000047740 SowahdQ8BY98 327 aa17.02■□□□□ 0.32
Upk2-201ENSMUST00000047740 Tmem119Q8R138 280 aa17.02■□□□□ 0.32
Upk2-201ENSMUST00000047740 Prdm11A2AGX3 565 aa17.01■□□□□ 0.31
Upk2-201ENSMUST00000047740 Cyp2c69E9PXC3 491 aa17.01■□□□□ 0.31
Upk2-201ENSMUST00000047740 Ppef1O35655 650 aa17.01■□□□□ 0.31
Upk2-201ENSMUST00000047740 Cyp2c40P56657 491 aa17.01■□□□□ 0.31
Upk2-201ENSMUST00000047740 PsapQ61207 557 aaKnown RBP17.01■□□□□ 0.31
Upk2-201ENSMUST00000047740 Speer4f1Q9D5Q6 258 aa17.01■□□□□ 0.31
Upk2-201ENSMUST00000047740 Erbb4Q61527 1308 aa17■□□□□ 0.31
Upk2-201ENSMUST00000047740 Ifit1bl2Q3U687 466 aa17■□□□□ 0.31
Upk2-201ENSMUST00000047740 Trim52Q8CDV4 233 aa17■□□□□ 0.31
Upk2-201ENSMUST00000047740 Ttll7A4Q9F0 912 aa16.99■□□□□ 0.31
Upk2-201ENSMUST00000047740 Gpr162Q3UN16 588 aa16.99■□□□□ 0.31
Upk2-201ENSMUST00000047740 Mak16Q8BGS0 296 aaKnown RBP16.99■□□□□ 0.31
Upk2-201ENSMUST00000047740 IarsQ8BU30 1262 aa16.99■□□□□ 0.31
Upk2-201ENSMUST00000047740 NgdnQ9DB96 315 aaKnown RBP16.99■□□□□ 0.31
Upk2-201ENSMUST00000047740 Adam1aQ60813 791 aa16.98■□□□□ 0.31
Upk2-201ENSMUST00000047740 Arid3aQ62431 601 aa16.98■□□□□ 0.31
Upk2-201ENSMUST00000047740 Nlrp3Q8R4B8 1033 aa16.98■□□□□ 0.31
Upk2-201ENSMUST00000047740 Ddx60E9PZQ1 1711 aa16.97■□□□□ 0.31
Upk2-201ENSMUST00000047740 Rbm25B2RY56 838 aaKnown RBP16.96■□□□□ 0.31
Upk2-201ENSMUST00000047740 Cyp2c23E9Q5K4 494 aa16.96■□□□□ 0.31
Upk2-201ENSMUST00000047740 EgfrQ01279 1210 aa16.96■□□□□ 0.31
Upk2-201ENSMUST00000047740 Q8C6G1 249 aa16.96■□□□□ 0.31
Upk2-201ENSMUST00000047740 FktnQ8R507 461 aa16.96■□□□□ 0.31
Upk2-201ENSMUST00000047740 StrcQ8VIM6 1809 aa16.96■□□□□ 0.3
Upk2-201ENSMUST00000047740 Ssc5dQ8BV57 1371 aa16.95■□□□□ 0.3
Upk2-201ENSMUST00000047740 Lmnb1P14733 588 aaKnown RBP16.95■□□□□ 0.3
Upk2-201ENSMUST00000047740 Rad21Q61550 635 aaKnown RBP16.95■□□□□ 0.3
Upk2-201ENSMUST00000047740 Ralbp1Q62172 648 aa16.95■□□□□ 0.3
Upk2-201ENSMUST00000047740 Morc2aQ69ZX6 1030 aa16.95■□□□□ 0.3
Upk2-201ENSMUST00000047740 Stox1B2RQL2 990 aa16.94■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms