RNA–Protein interactions for RNA: ENSMUST00000033544.13

Brcc3-201, Transcript of Lys-63-specific deubiquitinase BRCC36, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Brcc3, Length 4,310 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3-201ENSMUST00000033544 Sos1Q62245 1319 aa11.68□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Ncbp3Q8BZR9 615 aaKnown RBP11.68□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Nos1Q9Z0J4 1429 aa11.68□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Kiaa0556Q8C753 1610 aa11.68□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Hecw1Q8K4P8 1604 aa11.68□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Tmx1Q8VBT0 278 aa11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Med4Q9CQA5 270 aa11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Znf518aB2RRF6 1478 aaKnown RBP11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Uhrf1bp1B2KF50 1429 aa11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Hnrnpul1Q8VDM6 859 aaKnown RBP11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 HypkQ9CR41 129 aa11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Myo5cE9Q1F5 1742 aa11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Irx2P81066 474 aa11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Atp8b2P98199 1209 aa11.67□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Cul9Q80TT8 1865 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Tti2Q8BGV4 512 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Sh3bp5Q9Z131 463 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Wdr93Q402B2 695 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 TrhQ62361 256 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Gli2Q0VGT2 1544 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Trpm1Q2TV84 1622 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Cspp1B2RX88 1205 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Kcnj4P52189 445 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Strn4P58404 760 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Mical1Q8VDP3 1048 aa11.66□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Ercc3P49135 783 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Mrpl50Q8VDT9 159 aaKnown RBP11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Mcmdc2E9Q956 681 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Lnx1O70263 728 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Mtx1P47802 317 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Cdkn1cP49919 348 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Tyro3P55144 880 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Nucb2P81117 420 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Pkp1P97350 728 aaKnown RBP11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Polr3dQ91WD1 398 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Adgrb3Q80ZF8 1522 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Inpp5bQ8K337 993 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Fam114a1Q9D281 569 aa11.65□□□□□ -0.54
Brcc3-201ENSMUST00000033544 Mdc1Q5PSV9 1707 aa11.65□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Sh3bp1P55194 680 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Tmem132eQ6IEE6 982 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ap3b2Q9JME5 1082 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Esyt1Q3U7R1 1092 aaKnown RBP11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ddx19aQ61655 478 aaKnown RBP11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Nlrp3Q8R4B8 1033 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Nckap5lQ6GQX2 1323 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Taf3Q5HZG4 932 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Tbc1d31Q6NXY1 996 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ift57Q8BXG3 429 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Irx4Q9QY61 515 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Atp7bQ64446 1462 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Plxnc1Q9QZC2 1574 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ifit1Q64282 463 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 OvosQ3UU35 1456 aa11.64□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Prex1Q69ZK0 1650 aa11.63□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Neurod6P48986 337 aa11.63□□□□□ -0.55
Brcc3-201ENSMUST00000033544 NpatQ8BMA5 1420 aa11.63□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Anapc15P60007 132 aa11.63□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Adam1bQ8R534 806 aa11.63□□□□□ -0.55
Brcc3-201ENSMUST00000033544 PdcQ9QW08 244 aa11.63□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Spata31d1bE9QA57 1361 aa11.63□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Kansl3A2RSY1 903 aaKnown RBP11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ubash3aQ3V3E1 624 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Igf1rQ60751 1373 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Evi5lH3BKQ3 813 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Frat1P70339 274 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Nrxn1Q9CS84 1514 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ier5O89113 308 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Eya1P97767 591 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Nop14Q8R3N1 860 aaKnown RBP11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 NaspQ99MD9 773 aaKnown RBP11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Neurl4Q5NCX5 1563 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ets1P27577 440 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ap5z1Q3U829 807 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ifit2Q64112 472 aa11.62□□□□□ -0.55
Brcc3-201ENSMUST00000033544 NhsB1AV60 1647 aa11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Rad50P70388 1312 aa11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Rbm8a2A0A0N4SUH6 174 aa11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Mkrn3Q60764 544 aa11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 CtcfQ61164 736 aaKnown RBP11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Oxsr1Q6P9R2 527 aa11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Rbm8aQ9CWZ3 174 aa11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 L1td1Q587J6 782 aaKnown RBP11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Pes1Q9EQ61 584 aaKnown RBP11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Syt10Q9R0N4 523 aa11.61□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Ms4a2P20490 235 aa11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Cyp2d12Q8BVD2 504 aa11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 MaddQ80U28 1577 aa11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Abca8aQ8K442 1620 aa11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Bin1O08539 588 aaKnown RBP11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Nol8Q3UHX0 1147 aaKnown RBP11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Me3Q8BMF3 604 aa11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Add3Q9QYB5 706 aaKnown RBP11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Abca8bQ8K440 1620 aa11.6□□□□□ -0.55
Brcc3-201ENSMUST00000033544 TfrcQ62351 763 aaKnown RBP11.59□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Hook1Q8BIL5 728 aa11.59□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Tgfb1i1Q62219 461 aa11.59□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Stac3Q8BZ71 360 aa11.59□□□□□ -0.55
Brcc3-201ENSMUST00000033544 4930504O13RikQ8C5Z9 145 aa11.59□□□□□ -0.55
Brcc3-201ENSMUST00000033544 Slc26a8Q8R0C3 999 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms