RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Nutm1Q8BHP2 1126 aa18.67■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Mbd3Q9Z2D8 285 aaKnown RBP18.67■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Pim2Q62070 370 aa18.66■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Phf23Q8BSN5 401 aa18.66■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Zbtb1Q91VL9 713 aa18.66■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Nip7Q9CXK8 180 aaKnown RBP18.66■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Smarcc1P97496 1104 aa18.65■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Ankrd13dQ6PD24 605 aa18.65■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Tspyl2Q7TQI8 677 aa18.65■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Adamtsl1Q8BLI0 1745 aa18.64■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Gm13023A2A8N2 498 aa18.64■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Ankrd44B2RXR6 993 aa18.64■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Calr4Q3TQS0 420 aa18.64■□□□□ 0.57
Ercc1-201ENSMUST00000003645 MvpQ9EQK5 861 aa18.64■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Ppm1mQ8BU27 406 aa18.63■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Prr29B1ARI9 187 aa18.62■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Map3k2Q61083 619 aa18.62■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Q8BT18 775 aa18.62■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Bicc1Q99MQ1 977 aaKnown RBP18.62■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Bend3Q6PAL0 825 aa18.61■□□□□ 0.57
Ercc1-201ENSMUST00000003645 AampJ3QN89 436 aa18.6■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Lrrc43Q3V0L5 667 aa18.6■□□□□ 0.57
Ercc1-201ENSMUST00000003645 HellsQ60848 821 aa18.6■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Zbtb40Q6PCS8 1258 aa18.6■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Aldh1l2Q8K009 923 aa18.6■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Exoc6bA6H5Z3 810 aa18.59■□□□□ 0.57
Ercc1-201ENSMUST00000003645 MypnQ5DTJ9 1315 aa18.59■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Prr5lA2AVJ5 370 aa18.58■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Apba2P98084 750 aa18.58■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Slfnl1Q8BHW9 410 aa18.58■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Rapgef4Q9EQZ6 1011 aa18.58■□□□□ 0.57
Ercc1-201ENSMUST00000003645 Hspa2P17156 633 aa18.57■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Gnl3lQ6PGG6 577 aaKnown RBP18.57■□□□□ 0.56
Ercc1-201ENSMUST00000003645 C4bP01029 1738 aa18.57■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Duxf3A0A0N4SV92 674 aa18.56■□□□□ 0.56
Ercc1-201ENSMUST00000003645 NeflP08551 543 aa18.56■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Dpf1Q9QX66 387 aa18.56■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Sipa1l3G3X9J0 1776 aa18.56■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Zap70P43404 618 aa18.55■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Mphosph10Q810V0 681 aaKnown RBP18.55■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Chmp4bQ9D8B3 224 aaKnown RBP18.55■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Ssc5dQ8BV57 1371 aa18.55■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Kcnh8P59111 1102 aa18.55■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Esco1Q69Z69 843 aa18.55■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Ddx58Q6Q899 926 aa18.55■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Prkrip1Q9CWV6 186 aaKnown RBP18.55■□□□□ 0.56
Ercc1-201ENSMUST00000003645 AK157302I3ITR1 129 aa18.54■□□□□ 0.56
Ercc1-201ENSMUST00000003645 AbraQ8BUZ1 375 aa18.54■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Nlrp3Q8R4B8 1033 aa18.54■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Isca1Q9D924 129 aa18.54■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Trip6Q9Z1Y4 480 aa18.54■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Ddx60E9PZQ1 1711 aa18.53■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Zfyve9A2A8R0 1397 aa18.53■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Ltb4r2Q9JJL9 360 aa18.53■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Kdm2bQ6P1G2 1309 aa18.52■□□□□ 0.56
Ercc1-201ENSMUST00000003645 Cfdp1O88271 295 aaKnown RBP18.52■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Fam198bQ3UPI1 517 aa18.52■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Ripor2Q80U16 1078 aa18.52■□□□□ 0.55
Ercc1-201ENSMUST00000003645 RtcbQ99LF4 505 aaKnown RBP18.52■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Fkbp1aP26883 108 aaKnown RBP18.51■□□□□ 0.55
Ercc1-201ENSMUST00000003645 SowahdQ8BY98 327 aa18.51■□□□□ 0.55
Ercc1-201ENSMUST00000003645 HmcesQ8R1M0 353 aaKnown RBP18.51■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Strn4P58404 760 aa18.5■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Csrnp3P59055 597 aa18.5■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Snai1Q02085 264 aa18.5■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Nsfl1cQ9CZ44 370 aaKnown RBP18.5■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Lmbr1lQ9D1E5 489 aa18.5■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Stk36Q69ZM6 1316 aa18.5■□□□□ 0.55
Ercc1-201ENSMUST00000003645 MeiocA2AG06 965 aa18.49■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Prkar2bP31324 416 aa18.49■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Atp1b3P97370 278 aa18.49■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Fkbp5Q64378 456 aa18.49■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Slf2Q6P9P0 1278 aa18.49■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Ehd4Q9EQP2 541 aa18.49■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Spata31d1bE9QA57 1361 aa18.49■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Map3k13Q1HKZ5 959 aa18.48■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Ankib1Q6ZPS6 1085 aa18.48■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Eif3aP23116 1344 aaKnown RBP18.48■□□□□ 0.55
Ercc1-201ENSMUST00000003645 NppbP40753 121 aa18.47■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Grm8P47743 908 aa18.47■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Tm6sf1P58749 370 aa18.47■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Adam1aQ60813 791 aa18.47■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Akt1s1Q9D1F4 257 aa18.47■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Ank1Q02357 1862 aa18.46■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Gnai2P08752 355 aaKnown RBP18.46■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Myd88P22366 296 aa18.46■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Fgd1P52734 960 aa18.46■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Amhr2Q8K592 568 aa18.46■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Cwc25Q9DBF7 416 aa18.46■□□□□ 0.55
Ercc1-201ENSMUST00000003645 Mrc1Q61830 1456 aa18.46■□□□□ 0.55
Ercc1-201ENSMUST00000003645 NmiO35309 314 aa18.45■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Mum1Q6DID5 682 aa18.45■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Soga3Q6NZL0 945 aa18.45■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Ifit1bl2Q3U687 466 aa18.44■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Srp68Q8BMA6 625 aaKnown RBP18.44■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Stard3nlQ9DCI3 235 aa18.44■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Rlbp1Q9Z275 317 aa18.44■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Ubr3Q5U430 1889 aa18.44■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Lama4P97927 1816 aa18.44■□□□□ 0.54
Ercc1-201ENSMUST00000003645 Sumf1Q8R0F3 372 aa18.43■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms