RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Cfap157Q0VFX2 523 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Paxip1Q6NZQ4 1056 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Jmjd4Q8BFT6 427 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Sdc2P43407 202 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ttc12Q8BW49 704 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Setdb1O88974 1307 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ccdc170D3YXL0 722 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Kiaa1211Q5PR69 1207 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Als2cr12Q8BVM7 383 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Arfgap2Q99K28 520 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Sil1Q9EPK6 465 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 PrxO55103 1391 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Pik3r4Q8VD65 1358 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Stk11ipQ3TAA7 1072 aa10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 LlphQ9D945 130 aaKnown RBP10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Tfip11Q9ERA6 838 aaKnown RBP10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Elp1Q7TT37 1333 aaKnown RBP10.55□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Apol7aB2RT54 418 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ccdc121E9Q6D3 323 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Fermt1P59113 677 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Hook2Q7TMK6 716 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Skor1Q8BX46 964 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Taok3Q8BYC6 898 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Snw1Q9CSN1 536 aaKnown RBP10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Baiap2l1Q9DBJ3 514 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 GnaqP21279 359 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Krt79Q8VED5 531 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Zfp853A0A1D5RM95 733 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 GmnnO88513 206 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Gigyf2Q6Y7W8 1291 aaKnown RBP10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Plekhm2Q80TQ5 1018 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Stx6Q9JKK1 255 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Gm7298A0A0N4SVU1 1476 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 PaskQ8CEE6 1383 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Prkar2bP31324 416 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ctr9Q62018 1173 aaKnown RBP10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Tmem67Q8BR76 992 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 HnrnpmQ9D0E1 729 aaKnown RBP10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Tmco5aQ9D9D5 303 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Izumo3A6PWV3 263 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 NpcdF8VQB8 469 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ppp1r42Q8R1Z4 357 aa10.54□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Gm14025A2AP89 1413 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Erich4Q3UNU4 136 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Sass6Q80UK7 654 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Mrpl44Q9CY73 333 aaKnown RBP10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Pkd2l2Q9JLG4 621 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Fnbp4Q6ZQ03 1031 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Themis2Q91YX0 663 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Hsf2bpQ9D4G2 338 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 4931400O07RikQ9D4M5 137 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ncapd3Q6ZQK0 1506 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Nphp3Q7TNH6 1325 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ankle2Q6P1H6 964 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ggnbp2Q5SV77 696 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ctnna2Q61301 953 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 IqcgQ80W32 419 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Ccdc122Q8BVN0 290 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Gramd4Q8CB44 633 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Pof1bQ8K4L4 587 aa10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Noc2lQ9WV70 747 aaKnown RBP10.53□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Gnat3Q3V3I2 354 aa10.52□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Tmem266Q8BZB3 538 aa10.52□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 4921504E06RikQ8CET2 560 aa10.52□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Rbm33Q9CXK9 1231 aaKnown RBP10.52□□□□□ -0.72
Ccdc47-201ENSMUST00000002043 Polr3aB2RXC6 1390 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cnga2Q62398 664 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cfap100Q80VN0 613 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Mx2Q9WVP9 655 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ccdc141E9Q8Q6 1531 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ces1aE9PYP1 563 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cacna2d4Q5RJF7 1116 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Gas8Q60779 478 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Rassf2Q8BMS9 326 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Speer4dL7N216 212 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Smarcc1P97496 1104 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Pip4k2bQ80XI4 416 aa10.52□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Duox2A2AQ99 1517 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ppip5k1A2ARP1 1436 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Rasal2E9PW37 1286 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tax1bp1Q3UKC1 814 aaKnown RBP10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 ApobrQ8VBT6 942 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Srgap1Q91Z69 1062 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Bloc1s2Q9CWG9 143 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Znf704Q9ERQ3 566 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Sept7O55131 436 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Kif2aP28740 705 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Map3k7clP58500 142 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Senp1P59110 640 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tubb2aQ7TMM9 445 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tmx4Q8C0L0 335 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Znf131Q8K3J5 619 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tubb2bQ9CWF2 445 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cnnm2Q3TWN3 875 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Zfp644E9QA22 1323 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Iqgap2Q3UQ44 1575 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tbc1d8bA3KGB4 1114 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Evi5lH3BKQ3 813 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tnni2P13412 182 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Sh3d21Q7TSG5 549 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms