RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Insm2Q9JMC2 493 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Copg1Q9QZE5 874 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Brca2P97929 3329 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 BC034090A0A087WP46 1202 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Zfp300A2AE21 645 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Itga8A2ARA8 1062 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Itih4A6X935 942 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Ssxa1B1AUS7 101 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Gm20547B8JJN0 1276 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 9630041A04RikD3Z3U4 205 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Vmn1r170K7N6W9 304 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Pld3O35405 488 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Ctnnd2O35927 1247 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 IlkO55222 452 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 CfbP04186 761 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 P06324 132 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Tnfsf9P41274 309 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Pxmp2P42925 194 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Tnfsf4P43488 198 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Kcnk6Q3TBV4 313 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Q3TTL0 348 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Arid5aQ3U108 590 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Mapk10Q61831 464 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Znf366Q6NS86 746 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Ces2bQ6PDB7 556 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 AptxQ7TQC5 342 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Olfr1036Q7TR85 310 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Olfr871Q7TRF0 311 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Clec18aQ7TSQ1 534 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Fndc11Q80WB0 326 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Zc3hav1lQ8BFR1 296 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Ubap1Q8BH48 502 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 SybuQ8BHS8 665 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Rnf38Q8BI21 518 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Flrt2Q8BLU0 660 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Yipf4Q8C407 246 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Ppp1r3bQ8C767 284 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Rab44Q8CB87 725 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Pi4k2bQ8CBQ5 469 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Vps37aQ8CHS8 397 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Slc29a4Q8R139 528 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Gtf2a1lQ8R4I4 468 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Slc35c2Q8VCX2 364 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Gpn2Q8VEJ1 310 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Hemk1Q921L7 340 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Krt5Q922U2 580 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Txndc9Q9CQ79 226 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Exosc7Q9D0M0 291 aaKnown RBP14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Stpg4Q9DAG5 247 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 RgccQ9DBX1 137 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Stard5Q9EPQ7 213 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Vmn1r40Q9EQ46 310 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Chrnb2Q9ERK7 501 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Sae1Q9R1T2 350 aa14.08□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Igkv6-25A0A140T8N7 115 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Cd163l1A0A1B0GSB0 991 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Olfr1164A2AVT5 326 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 AU018091E9PWS4 684 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Gm17067E9Q6S4 354 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 HgdO09173 445 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 DdcO88533 480 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Gnpda1O88958 289 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 P01637 128 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Gh1P06880 216 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Rph3aP47708 681 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Lzts1P60853 599 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Rps13P62301 151 aaKnown RBP14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Gfi1P70338 423 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 NxnP97346 435 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 SctQ08535 133 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Abraxas2Q3TCJ1 415 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Smu1Q3UKJ7 513 aaKnown RBP14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Clec4a4Q5YIR8 236 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Tmem198Q8BG75 360 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Fbxw8Q8BIA4 598 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Edem2Q8BJT9 577 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Casp9Q8C3Q9 454 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Esrp2Q8K0G8 717 aaKnown RBP14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Ddx52Q8K301 598 aaKnown RBP14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Pcolce2Q8R4W6 414 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Man2c1Q91W89 1039 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Fam118aQ91YN1 357 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 EtfdhQ921G7 616 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 SmtnQ921U8 923 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Znf524Q9D0B1 321 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Tmem30cQ9D4D7 342 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Serpinb9bQ9DAV6 377 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Nacc2Q9DCM7 586 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Mmp1aQ9EPL5 464 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Slco2a1Q9EPT5 643 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Ropn1Q9ESG2 212 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 MioxQ9QXN5 285 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Zbp1Q9QY24 411 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Vps29Q9QZ88 182 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Olfr1508Q9R0K4 310 aa14.07□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Fer1l4A3KGK3 1992 aa14.06□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Trmt1lA2RSY6 728 aaKnown RBP14.06□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Rhox1B1APN4 224 aa14.06□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Slc25a54B1AUS6 473 aa14.06□□□□□ -0.16
Ercc1-201ENSMUST00000003645 Apba1B2RUJ5 842 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms