Protein–RNA interactions for Protein: Q8R4W6

Pcolce2, Procollagen C-endopeptidase enhancer 2, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcolce2Q8R4W6 Gm25239-201ENSMUST00000174915 86 ntBASIC38,65■■■■□ 3,78
Pcolce2Q8R4W6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35,97■■■■□ 3,35
Pcolce2Q8R4W6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35,44■■■■□ 3,26
Pcolce2Q8R4W6 Gm24109-201ENSMUST00000175489 103 ntBASIC33,74■■■□□ 2,99
Pcolce2Q8R4W6 Gm15042-201ENSMUST00000120212 883 ntBASIC33,32■■■□□ 2,92
Pcolce2Q8R4W6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32,7■■■□□ 2,83
Pcolce2Q8R4W6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32,67■■■□□ 2,82
Pcolce2Q8R4W6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32,54■■■□□ 2,8
Pcolce2Q8R4W6 Gm15045-201ENSMUST00000117359 883 ntBASIC32,47■■■□□ 2,79
Pcolce2Q8R4W6 Gm23366-201ENSMUST00000175022 89 ntBASIC32,24■■■□□ 2,75
Pcolce2Q8R4W6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32,14■■■□□ 2,74
Pcolce2Q8R4W6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31,63■■■□□ 2,65
Pcolce2Q8R4W6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,47■■■□□ 2,63
Pcolce2Q8R4W6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31,37■■■□□ 2,61
Pcolce2Q8R4W6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Pcolce2Q8R4W6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Pcolce2Q8R4W6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31,28■■■□□ 2,6
Pcolce2Q8R4W6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Pcolce2Q8R4W6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
Pcolce2Q8R4W6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30,88■■■□□ 2,53
Pcolce2Q8R4W6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30,79■■■□□ 2,52
Pcolce2Q8R4W6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30,74■■■□□ 2,51
Pcolce2Q8R4W6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,72■■■□□ 2,51
Pcolce2Q8R4W6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Pcolce2Q8R4W6 Gm25238-201ENSMUST00000174914 89 ntBASIC30,65■■■□□ 2,5
Pcolce2Q8R4W6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,22■■■□□ 2,43
Pcolce2Q8R4W6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Pcolce2Q8R4W6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,08■■■□□ 2,41
Pcolce2Q8R4W6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30,07■■■□□ 2,4
Pcolce2Q8R4W6 Psd-208ENSMUST00000224556 2034 ntBASIC30,03■■■□□ 2,4
Pcolce2Q8R4W6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29,97■■■□□ 2,39
Pcolce2Q8R4W6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29,84■■■□□ 2,37
Pcolce2Q8R4W6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Pcolce2Q8R4W6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Pcolce2Q8R4W6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29,66■■■□□ 2,34
Pcolce2Q8R4W6 Gm25262-201ENSMUST00000174934 133 ntBASIC29,65■■■□□ 2,34
Pcolce2Q8R4W6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,62■■■□□ 2,33
Pcolce2Q8R4W6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29,6■■■□□ 2,33
Pcolce2Q8R4W6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,46■■■□□ 2,31
Pcolce2Q8R4W6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29,4■■■□□ 2,3
Pcolce2Q8R4W6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,36■■■□□ 2,29
Pcolce2Q8R4W6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Pcolce2Q8R4W6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29,31■■■□□ 2,28
Pcolce2Q8R4W6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29,25■■■□□ 2,27
Pcolce2Q8R4W6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,18■■■□□ 2,26
Pcolce2Q8R4W6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29,16■■■□□ 2,26
Pcolce2Q8R4W6 Gm26115-201ENSMUST00000175605 87 ntBASIC29,11■■■□□ 2,25
Pcolce2Q8R4W6 Gm27325-201ENSMUST00000175467 74 ntBASIC29,1■■■□□ 2,25
Pcolce2Q8R4W6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29,09■■■□□ 2,25
Pcolce2Q8R4W6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Pcolce2Q8R4W6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29,02■■■□□ 2,24
Pcolce2Q8R4W6 Rab21-202ENSMUST00000218831 843 ntBASIC28,91■■■□□ 2,22
Pcolce2Q8R4W6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28,9■■■□□ 2,22
Pcolce2Q8R4W6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28,89■■■□□ 2,22
Pcolce2Q8R4W6 Gm8109-201ENSMUST00000194076 746 ntBASIC28,85■■■□□ 2,21
Pcolce2Q8R4W6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Pcolce2Q8R4W6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28,75■■■□□ 2,19
Pcolce2Q8R4W6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,73■■■□□ 2,19
Pcolce2Q8R4W6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,18
Pcolce2Q8R4W6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,69■■■□□ 2,18
Pcolce2Q8R4W6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
Pcolce2Q8R4W6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
Pcolce2Q8R4W6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Pcolce2Q8R4W6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,59■■■□□ 2,17
Pcolce2Q8R4W6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Pcolce2Q8R4W6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,5■■■□□ 2,15
Pcolce2Q8R4W6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28,47■■■□□ 2,15
Pcolce2Q8R4W6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28,47■■■□□ 2,15
Pcolce2Q8R4W6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,43■■■□□ 2,14
Pcolce2Q8R4W6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,43■■■□□ 2,14
Pcolce2Q8R4W6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Pcolce2Q8R4W6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28,4■■■□□ 2,14
Pcolce2Q8R4W6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28,34■■■□□ 2,13
Pcolce2Q8R4W6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28,32■■■□□ 2,12
Pcolce2Q8R4W6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28,29■■■□□ 2,12
Pcolce2Q8R4W6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Pcolce2Q8R4W6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28,19■■■□□ 2,1
Pcolce2Q8R4W6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28,17■■■□□ 2,1
Pcolce2Q8R4W6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28,17■■■□□ 2,1
Pcolce2Q8R4W6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Pcolce2Q8R4W6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28,09■■■□□ 2,09
Pcolce2Q8R4W6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Pcolce2Q8R4W6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,05■■■□□ 2,08
Pcolce2Q8R4W6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28,05■■■□□ 2,08
Pcolce2Q8R4W6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,05■■■□□ 2,08
Pcolce2Q8R4W6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28,03■■■□□ 2,08
Pcolce2Q8R4W6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28,02■■■□□ 2,08
Pcolce2Q8R4W6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28,01■■■□□ 2,07
Pcolce2Q8R4W6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27,99■■■□□ 2,07
Pcolce2Q8R4W6 Gm17082-201ENSMUST00000166043 1091 ntBASIC27,98■■■□□ 2,07
Pcolce2Q8R4W6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,94■■■□□ 2,06
Pcolce2Q8R4W6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27,92■■■□□ 2,06
Pcolce2Q8R4W6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,91■■■□□ 2,06
Pcolce2Q8R4W6 Gm24804-201ENSMUST00000174982 85 ntBASIC27,88■■■□□ 2,05
Pcolce2Q8R4W6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27,88■■■□□ 2,05
Pcolce2Q8R4W6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27,74■■■□□ 2,03
Pcolce2Q8R4W6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,73■■■□□ 2,03
Pcolce2Q8R4W6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,73■■■□□ 2,03
Pcolce2Q8R4W6 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,72■■■□□ 2,03
Pcolce2Q8R4W6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,72■■■□□ 2,03
Retrieved 100 of 76,532 protein–RNA pairs in 18,8 ms