Protein–RNA interactions for Protein: D3Z3U4

9630041A04Rik, RIKEN cDNA 9630041A04 gene, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9630041A04RikD3Z3U4 Gm25239-201ENSMUST00000174915 86 ntBASIC39.15■■■■□ 3.86
9630041A04RikD3Z3U4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
9630041A04RikD3Z3U4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
9630041A04RikD3Z3U4 Gm24109-201ENSMUST00000175489 103 ntBASIC34.22■■■■□ 3.07
9630041A04RikD3Z3U4 Gm15042-201ENSMUST00000120212 883 ntBASIC33.69■■■□□ 2.98
9630041A04RikD3Z3U4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
9630041A04RikD3Z3U4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
9630041A04RikD3Z3U4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
9630041A04RikD3Z3U4 Gm15045-201ENSMUST00000117359 883 ntBASIC32.73■■■□□ 2.83
9630041A04RikD3Z3U4 Gm23366-201ENSMUST00000175022 89 ntBASIC32.73■■■□□ 2.83
9630041A04RikD3Z3U4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
9630041A04RikD3Z3U4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.07■■■□□ 2.72
9630041A04RikD3Z3U4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.9■■■□□ 2.7
9630041A04RikD3Z3U4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
9630041A04RikD3Z3U4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
9630041A04RikD3Z3U4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
9630041A04RikD3Z3U4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.64■■■□□ 2.66
9630041A04RikD3Z3U4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
9630041A04RikD3Z3U4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.32■■■□□ 2.6
9630041A04RikD3Z3U4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
9630041A04RikD3Z3U4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
9630041A04RikD3Z3U4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
9630041A04RikD3Z3U4 Gm25238-201ENSMUST00000174914 89 ntBASIC31.04■■■□□ 2.56
9630041A04RikD3Z3U4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
9630041A04RikD3Z3U4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
9630041A04RikD3Z3U4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
9630041A04RikD3Z3U4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
9630041A04RikD3Z3U4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
9630041A04RikD3Z3U4 Gm25262-201ENSMUST00000174934 133 ntBASIC30.22■■■□□ 2.43
9630041A04RikD3Z3U4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
9630041A04RikD3Z3U4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.2■■■□□ 2.43
9630041A04RikD3Z3U4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.01■■■□□ 2.39
9630041A04RikD3Z3U4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
9630041A04RikD3Z3U4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
9630041A04RikD3Z3U4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.88■■■□□ 2.37
9630041A04RikD3Z3U4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.78■■■□□ 2.36
9630041A04RikD3Z3U4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
9630041A04RikD3Z3U4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.74■■■□□ 2.35
9630041A04RikD3Z3U4 Gm26115-201ENSMUST00000175605 87 ntBASIC29.71■■■□□ 2.35
9630041A04RikD3Z3U4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.7■■■□□ 2.35
9630041A04RikD3Z3U4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.59■■■□□ 2.33
9630041A04RikD3Z3U4 Psd-208ENSMUST00000224556 2034 ntBASIC29.57■■■□□ 2.32
9630041A04RikD3Z3U4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
9630041A04RikD3Z3U4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
9630041A04RikD3Z3U4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
9630041A04RikD3Z3U4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
9630041A04RikD3Z3U4 Gm27325-201ENSMUST00000175467 74 ntBASIC29.41■■■□□ 2.3
9630041A04RikD3Z3U4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
9630041A04RikD3Z3U4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
9630041A04RikD3Z3U4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.34■■■□□ 2.29
9630041A04RikD3Z3U4 Rab21-202ENSMUST00000218831 843 ntBASIC29.33■■■□□ 2.29
9630041A04RikD3Z3U4 Gm8109-201ENSMUST00000194076 746 ntBASIC29.32■■■□□ 2.28
9630041A04RikD3Z3U4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
9630041A04RikD3Z3U4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.24■■■□□ 2.27
9630041A04RikD3Z3U4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
9630041A04RikD3Z3U4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
9630041A04RikD3Z3U4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
9630041A04RikD3Z3U4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
9630041A04RikD3Z3U4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.88■■■□□ 2.21
9630041A04RikD3Z3U4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
9630041A04RikD3Z3U4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
9630041A04RikD3Z3U4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
9630041A04RikD3Z3U4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.68■■■□□ 2.18
9630041A04RikD3Z3U4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
9630041A04RikD3Z3U4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.68■■■□□ 2.18
9630041A04RikD3Z3U4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.55■■■□□ 2.16
9630041A04RikD3Z3U4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
9630041A04RikD3Z3U4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
9630041A04RikD3Z3U4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
9630041A04RikD3Z3U4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
9630041A04RikD3Z3U4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
9630041A04RikD3Z3U4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.46■■■□□ 2.15
9630041A04RikD3Z3U4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
9630041A04RikD3Z3U4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
9630041A04RikD3Z3U4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
9630041A04RikD3Z3U4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
9630041A04RikD3Z3U4 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.35■■■□□ 2.13
9630041A04RikD3Z3U4 Gm24804-201ENSMUST00000174982 85 ntBASIC28.34■■■□□ 2.13
9630041A04RikD3Z3U4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.3■■■□□ 2.12
9630041A04RikD3Z3U4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
9630041A04RikD3Z3U4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
9630041A04RikD3Z3U4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
9630041A04RikD3Z3U4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
9630041A04RikD3Z3U4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
9630041A04RikD3Z3U4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
9630041A04RikD3Z3U4 Gm27322-201ENSMUST00000184007 104 ntBASIC28.14■■■□□ 2.1
9630041A04RikD3Z3U4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
9630041A04RikD3Z3U4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.04■■■□□ 2.08
9630041A04RikD3Z3U4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
9630041A04RikD3Z3U4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.03■■■□□ 2.08
9630041A04RikD3Z3U4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.98■■■□□ 2.07
9630041A04RikD3Z3U4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
9630041A04RikD3Z3U4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.94■■■□□ 2.06
9630041A04RikD3Z3U4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
9630041A04RikD3Z3U4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
9630041A04RikD3Z3U4 Zfp131-205ENSMUST00000223812 663 ntBASIC27.88■■■□□ 2.05
9630041A04RikD3Z3U4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
9630041A04RikD3Z3U4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.84■■■□□ 2.05
9630041A04RikD3Z3U4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
9630041A04RikD3Z3U4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms