Protein–RNA interactions for Protein: Q80WB0

Fndc11, Fibronectin type III domain-containing protein 11, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc11Q80WB0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Fndc11Q80WB0 Gm25239-201ENSMUST00000174915 86 ntBASIC33.39■■■□□ 2.94
Fndc11Q80WB0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
Fndc11Q80WB0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Fndc11Q80WB0 Psd-208ENSMUST00000224556 2034 ntBASIC31.58■■■□□ 2.65
Fndc11Q80WB0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Fndc11Q80WB0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Fndc11Q80WB0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Fndc11Q80WB0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Fndc11Q80WB0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Fndc11Q80WB0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Fndc11Q80WB0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Fndc11Q80WB0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Fndc11Q80WB0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Fndc11Q80WB0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Fndc11Q80WB0 Gm15042-201ENSMUST00000120212 883 ntBASIC30.14■■■□□ 2.42
Fndc11Q80WB0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.02■■■□□ 2.4
Fndc11Q80WB0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Fndc11Q80WB0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Fndc11Q80WB0 Gm15045-201ENSMUST00000117359 883 ntBASIC29.64■■■□□ 2.34
Fndc11Q80WB0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Fndc11Q80WB0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Fndc11Q80WB0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Fndc11Q80WB0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Fndc11Q80WB0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Fndc11Q80WB0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Fndc11Q80WB0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.12■■■□□ 2.25
Fndc11Q80WB0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Fndc11Q80WB0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Fndc11Q80WB0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Fndc11Q80WB0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Fndc11Q80WB0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
Fndc11Q80WB0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.99■■■□□ 2.23
Fndc11Q80WB0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.86■■■□□ 2.21
Fndc11Q80WB0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Fndc11Q80WB0 Gm24109-201ENSMUST00000175489 103 ntBASIC28.82■■■□□ 2.2
Fndc11Q80WB0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Fndc11Q80WB0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Fndc11Q80WB0 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.63■■■□□ 2.17
Fndc11Q80WB0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Fndc11Q80WB0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Fndc11Q80WB0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.52■■■□□ 2.16
Fndc11Q80WB0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Fndc11Q80WB0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.21■■■□□ 2.11
Fndc11Q80WB0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Fndc11Q80WB0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.15■■■□□ 2.1
Fndc11Q80WB0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Fndc11Q80WB0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Fndc11Q80WB0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Fndc11Q80WB0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Fndc11Q80WB0 Gm23366-201ENSMUST00000175022 89 ntBASIC28.05■■■□□ 2.08
Fndc11Q80WB0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Fndc11Q80WB0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Fndc11Q80WB0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Fndc11Q80WB0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Fndc11Q80WB0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Fndc11Q80WB0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Fndc11Q80WB0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Fndc11Q80WB0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Fndc11Q80WB0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Fndc11Q80WB0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Fndc11Q80WB0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.76■■■□□ 2.03
Fndc11Q80WB0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Fndc11Q80WB0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Fndc11Q80WB0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.66■■■□□ 2.02
Fndc11Q80WB0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Fndc11Q80WB0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Fndc11Q80WB0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2
Fndc11Q80WB0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Fndc11Q80WB0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Fndc11Q80WB0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Fndc11Q80WB0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Fndc11Q80WB0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Fndc11Q80WB0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Fndc11Q80WB0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Fndc11Q80WB0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Fndc11Q80WB0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
Fndc11Q80WB0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
Fndc11Q80WB0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Fndc11Q80WB0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Fndc11Q80WB0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Fndc11Q80WB0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Fndc11Q80WB0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Fndc11Q80WB0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Fndc11Q80WB0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Fndc11Q80WB0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Fndc11Q80WB0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Fndc11Q80WB0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Fndc11Q80WB0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Fndc11Q80WB0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Fndc11Q80WB0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.85■■□□□ 1.89
Fndc11Q80WB0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Fndc11Q80WB0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Fndc11Q80WB0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.76■■□□□ 1.87
Fndc11Q80WB0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Fndc11Q80WB0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Fndc11Q80WB0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Fndc11Q80WB0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Fndc11Q80WB0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Fndc11Q80WB0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.65■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms